| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
Click here to switch to the map view.
The map label for this gene is 77460684
Identifier: 77460684
GI number: 77460684
Start: 5034924
End: 5035166
Strand: Reverse
Name: 77460684
Synonym: Pfl01_4463
Alternate gene names: NA
Gene position: 5035166-5034924 (Counterclockwise)
Preceding gene: 77460685
Following gene: 77460681
Centisome position: 78.21
GC content: 60.49
Gene sequence:
>243_bases ATGGCACGTAAAGAGTTCGAACACTTCGAAGCGGTTTCCGCTGTCGTCCCCGTCGAGTTGGGCGGCAACAAGGGTTATCA CGCGGCGATTGCCGTCAAGGCCCTGGTCGACGGCGGCGCACCGCGCTTTCACAAACTGCTGAACGATCAGGTTTTTCCCG GCGCCATCGCCGCCGATGAAGCCGCGATCAATGAGCTGGACAAGCTCAAGGGCGTCACCGACGACGCCGAGCTGATCTGG TAA
Upstream 100 bases:
>100_bases TCGGCTGCACAGGCCGTAGGGCAATGCACTGCGCCGATACACAAACTCGCCGGTTGAATGTTTAATGTCCGGCTTATCTG ACTGAGCCAGGACCTGCGAT
Downstream 100 bases:
>100_bases GCGCTTACTTCGTCGCCCCCGGGCGCCACATCTTGAACAACGCCTCCGGCCCCAGCTGGAAGTAGTCCGCCGGCCCGCCG CCCCGCAGTATCGGTTCGGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 80; Mature: 79
Protein sequence:
>80_residues MARKEFEHFEAVSAVVPVELGGNKGYHAAIAVKALVDGGAPRFHKLLNDQVFPGAIAADEAAINELDKLKGVTDDAELIW
Sequences:
>Translated_80_residues MARKEFEHFEAVSAVVPVELGGNKGYHAAIAVKALVDGGAPRFHKLLNDQVFPGAIAADEAAINELDKLKGVTDDAELIW >Mature_79_residues ARKEFEHFEAVSAVVPVELGGNKGYHAAIAVKALVDGGAPRFHKLLNDQVFPGAIAADEAAINELDKLKGVTDDAELIW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8557; Mature: 8426
Theoretical pI: Translated: 4.76; Mature: 4.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARKEFEHFEAVSAVVPVELGGNKGYHAAIAVKALVDGGAPRFHKLLNDQVFPGAIAADE CCCCHHHHHHHHHHHEEEEECCCCCCHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCCH AAINELDKLKGVTDDAELIW HHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure ARKEFEHFEAVSAVVPVELGGNKGYHAAIAVKALVDGGAPRFHKLLNDQVFPGAIAADE CCCHHHHHHHHHHHEEEEECCCCCCHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCCH AAINELDKLKGVTDDAELIW HHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA