Definition Pseudomonas fluorescens Pf0-1 chromosome, complete genome.
Accession NC_007492
Length 6,438,405

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The map label for this gene is yxlA [H]

Identifier: 77459483

GI number: 77459483

Start: 3743042

End: 3744448

Strand: Reverse

Name: yxlA [H]

Synonym: Pfl01_3261

Alternate gene names: 77459483

Gene position: 3744448-3743042 (Counterclockwise)

Preceding gene: 77459486

Following gene: 77459482

Centisome position: 58.16

GC content: 60.63

Gene sequence:

>1407_bases
ATGTCCCAGATGTCCCGGCAAGATCCGTTGATCGAGAATCACACGGTCGACTACGTCCCACTCGCGGAACGCCACGGGAA
GGCCCGCGACCTTTTCACCCTTTGGTTCAGCACCAACATTGCGCCACTGCCCATCGTCACCGGCGCCATGGTGGTTCAGG
TATTTCATCTCGACTTGTTCTGGGGGCTGCTGGCGATTGCGCTGGGGCACATGATCGGCGGCGTGGTGATCGCCCTGGCG
TCGGCGCAAGGCCCGCGCATGGGCATTCCGCAGATGGTGCAGAGCCGGGGCCAGTTCGGGCGTTACGGCGCGCTGTTGAT
CGTGTTCTTTGCGGCGATCATCTACATCGGCTTTTTCATTTCCAACATTGTGCTGGCGGGTAAATCCATCGTCGGCATTG
CGCCGTCGGTGCCGGTGCCGTTGAGCATTCTGATCGGCGCTCTCAGCGCCACGGCCATTGGTGTGATCGGCTACAACTTC
ATTCACACGCTGAACCGCATCGGCACCTGGGTGATGGGCAGCGCGCTGCTGGCCGGGTTCATCTACATCTTTGCCCACGA
GTTGCCGGCGGACTTCCTTACCCGGGGCAGCTTCAATCTGTCCGGATGGCTGGCGACGATGTCGCTGGGGATCATCTGGC
AGATCAGCTTTTCGCCGTACGTCTCCGACTATTCCCGCTACCTGCCGGCGGACATCGGCATCGGCAAGCCATTTATCGCG
ACTTATCTGGGCGCCACGCTGGGCACGATTCTGTCGTTCACGTTCGGCGCGGTGGCGGTACTGGCGACGCCGGAAGGCAC
TGAGGCGATGGCGGCGGTCAAGCAATCCACCGGTTGGCTCGGGCCGATTCTGATGGTGCTGTTCCTGCTCAACATCATCA
GCCACAACGCGCTGAATCTGTATGGCGCGGTACTGTCGATCATTACCTCGATCCAGACCTTTGCCAGCCAATGGACGCCG
AGTATCAAAGTGCGAGTGAGCTTGTCGGGCGTGGTGCTGGCGGGCTGCTGCCTGGTGGCGCTGGGCGCGTCGGCGGATTT
CATTTCCGAGTTCATCGGTTTGATTCTGGCGCTGCTGCTGGTGTTGGTACCGTGGGCGTCGATCAACCTGATCGACTTCT
ATCTGATCAAGCGCGGTAGCTACGACATCGCTTCGATCTTCCGCGCCGACGGCGGCATTTATGGGCGCTTCAACTTGCAC
GCGATCATTGCCTACTTCATCGGCATCATCGTGCAACTGCCGTTCGCCAACACATCGTTGTATGTCGGGCCGTACGCCAA
TCTGGTGGAAGGCGCGGACCTGTCATGGCTGGTCGGCCTGATCGTGACGTGCCCGCTGTATTACTGCCTCGCGACCCGTG
GCCAGACTCAGCAGAGCAGGGCGGCGCGGTTGGGTTTTACCGACTGA

Upstream 100 bases:

>100_bases
TGGAATACCATAATATGGTGTTCATCTGAGGGGCGGCCACGAATCTCCCCCGGTTTGGCTTCATACAACGATAAGAACAG
ACCCAATCGAGTTCATTTTT

Downstream 100 bases:

>100_bases
GCGTTCGCAGGCTGTTCAAACAATGCCCGGCACTTCGCCGGGCATTGTTGTTTCCGCATCCCGGCGGTCACGCAAATTGG
CCATTTCGATCCCCTTTTGG

Product: cytosine/purines, uracil, thiamine, allantoin permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 468; Mature: 467

Protein sequence:

>468_residues
MSQMSRQDPLIENHTVDYVPLAERHGKARDLFTLWFSTNIAPLPIVTGAMVVQVFHLDLFWGLLAIALGHMIGGVVIALA
SAQGPRMGIPQMVQSRGQFGRYGALLIVFFAAIIYIGFFISNIVLAGKSIVGIAPSVPVPLSILIGALSATAIGVIGYNF
IHTLNRIGTWVMGSALLAGFIYIFAHELPADFLTRGSFNLSGWLATMSLGIIWQISFSPYVSDYSRYLPADIGIGKPFIA
TYLGATLGTILSFTFGAVAVLATPEGTEAMAAVKQSTGWLGPILMVLFLLNIISHNALNLYGAVLSIITSIQTFASQWTP
SIKVRVSLSGVVLAGCCLVALGASADFISEFIGLILALLLVLVPWASINLIDFYLIKRGSYDIASIFRADGGIYGRFNLH
AIIAYFIGIIVQLPFANTSLYVGPYANLVEGADLSWLVGLIVTCPLYYCLATRGQTQQSRAARLGFTD

Sequences:

>Translated_468_residues
MSQMSRQDPLIENHTVDYVPLAERHGKARDLFTLWFSTNIAPLPIVTGAMVVQVFHLDLFWGLLAIALGHMIGGVVIALA
SAQGPRMGIPQMVQSRGQFGRYGALLIVFFAAIIYIGFFISNIVLAGKSIVGIAPSVPVPLSILIGALSATAIGVIGYNF
IHTLNRIGTWVMGSALLAGFIYIFAHELPADFLTRGSFNLSGWLATMSLGIIWQISFSPYVSDYSRYLPADIGIGKPFIA
TYLGATLGTILSFTFGAVAVLATPEGTEAMAAVKQSTGWLGPILMVLFLLNIISHNALNLYGAVLSIITSIQTFASQWTP
SIKVRVSLSGVVLAGCCLVALGASADFISEFIGLILALLLVLVPWASINLIDFYLIKRGSYDIASIFRADGGIYGRFNLH
AIIAYFIGIIVQLPFANTSLYVGPYANLVEGADLSWLVGLIVTCPLYYCLATRGQTQQSRAARLGFTD
>Mature_467_residues
SQMSRQDPLIENHTVDYVPLAERHGKARDLFTLWFSTNIAPLPIVTGAMVVQVFHLDLFWGLLAIALGHMIGGVVIALAS
AQGPRMGIPQMVQSRGQFGRYGALLIVFFAAIIYIGFFISNIVLAGKSIVGIAPSVPVPLSILIGALSATAIGVIGYNFI
HTLNRIGTWVMGSALLAGFIYIFAHELPADFLTRGSFNLSGWLATMSLGIIWQISFSPYVSDYSRYLPADIGIGKPFIAT
YLGATLGTILSFTFGAVAVLATPEGTEAMAAVKQSTGWLGPILMVLFLLNIISHNALNLYGAVLSIITSIQTFASQWTPS
IKVRVSLSGVVLAGCCLVALGASADFISEFIGLILALLLVLVPWASINLIDFYLIKRGSYDIASIFRADGGIYGRFNLHA
IIAYFIGIIVQLPFANTSLYVGPYANLVEGADLSWLVGLIVTCPLYYCLATRGQTQQSRAARLGFTD

Specific function: Unknown

COG id: COG1457

COG function: function code F; Purine-cytosine permease and related proteins

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the purine-cytosine permease family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001248 [H]

Pfam domain/function: PF02133 Transp_cyt_pur [H]

EC number: NA

Molecular weight: Translated: 50287; Mature: 50156

Theoretical pI: Translated: 8.28; Mature: 8.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQMSRQDPLIENHTVDYVPLAERHGKARDLFTLWFSTNIAPLPIVTGAMVVQVFHLDLF
CCCCCCCCCCCCCCCCCEEECHHHCCCHHHEEEEEEECCCCCHHHHHHHHHHHHHHHHHH
WGLLAIALGHMIGGVVIALASAQGPRMGIPQMVQSRGQFGRYGALLIVFFAAIIYIGFFI
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH
SNIVLAGKSIVGIAPSVPVPLSILIGALSATAIGVIGYNFIHTLNRIGTWVMGSALLAGF
HHHHHCCCCCEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IYIFAHELPADFLTRGSFNLSGWLATMSLGIIWQISFSPYVSDYSRYLPADIGIGKPFIA
HHHHHHHCCHHHHHCCCCCHHHHHHHHHCCEEEEEECCHHHHHHHHHCCCCCCCCCHHHH
TYLGATLGTILSFTFGAVAVLATPEGTEAMAAVKQSTGWLGPILMVLFLLNIISHNALNL
HHHHHHHHHHHHHHHHHEEEEECCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHH
YGAVLSIITSIQTFASQWTPSIKVRVSLSGVVLAGCCLVALGASADFISEFIGLILALLL
HHHHHHHHHHHHHHHHHCCCCEEEEEEECHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
VLVPWASINLIDFYLIKRGSYDIASIFRADGGIYGRFNLHAIIAYFIGIIVQLPFANTSL
HHHCCCCHHHHEEEEEECCCCHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHCCCCCCCEE
YVGPYANLVEGADLSWLVGLIVTCPLYYCLATRGQTQQSRAARLGFTD
EECCCHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCC
>Mature Secondary Structure 
SQMSRQDPLIENHTVDYVPLAERHGKARDLFTLWFSTNIAPLPIVTGAMVVQVFHLDLF
CCCCCCCCCCCCCCCCEEECHHHCCCHHHEEEEEEECCCCCHHHHHHHHHHHHHHHHHH
WGLLAIALGHMIGGVVIALASAQGPRMGIPQMVQSRGQFGRYGALLIVFFAAIIYIGFFI
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH
SNIVLAGKSIVGIAPSVPVPLSILIGALSATAIGVIGYNFIHTLNRIGTWVMGSALLAGF
HHHHHCCCCCEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IYIFAHELPADFLTRGSFNLSGWLATMSLGIIWQISFSPYVSDYSRYLPADIGIGKPFIA
HHHHHHHCCHHHHHCCCCCHHHHHHHHHCCEEEEEECCHHHHHHHHHCCCCCCCCCHHHH
TYLGATLGTILSFTFGAVAVLATPEGTEAMAAVKQSTGWLGPILMVLFLLNIISHNALNL
HHHHHHHHHHHHHHHHHEEEEECCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHH
YGAVLSIITSIQTFASQWTPSIKVRVSLSGVVLAGCCLVALGASADFISEFIGLILALLL
HHHHHHHHHHHHHHHHHCCCCEEEEEEECHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
VLVPWASINLIDFYLIKRGSYDIASIFRADGGIYGRFNLHAIIAYFIGIIVQLPFANTSL
HHHCCCCHHHHEEEEEECCCCHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHCCCCCCCEE
YVGPYANLVEGADLSWLVGLIVTCPLYYCLATRGQTQQSRAARLGFTD
EECCCHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8969509; 9384377 [H]