| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is mas [H]
Identifier: 77458179
GI number: 77458179
Start: 2226269
End: 2227267
Strand: Reverse
Name: mas [H]
Synonym: Pfl01_1952
Alternate gene names: 77458179
Gene position: 2227267-2226269 (Counterclockwise)
Preceding gene: 77458180
Following gene: 77458178
Centisome position: 34.59
GC content: 64.56
Gene sequence:
>999_bases ATGACGTTGCCCAATGAAATGACCCGAATCGAAATCACCGAACCGGGTGGGCCCGAGGTTCTGCAATCCCGACGCGTGCC GCTGCCGGTCGCCGCCGAAGGCGAAGTTCTGATCCGCGTGCACGCCGCCGGCGTCAATCGCCCGGACGCCCTGCAACGCG CCGGCAAGTACCCGATGAAGCCCGGCATGAACCCGATTCCGGGCCTTGAAGTGGCCGGCGAGGTCGTGGCGATTGGCAGC GGTGTCAGCACATTCGCGGTCGGTGACCGGGTCTGCGCGCTGACCAATGGCGGAGGTTACGCCGAATACTGCACGGTCCC GGCCGGCCAGACTCTGCCAATTCCCGACGGGCTCGACTGGATTCAGGCTGCGGCTATTCCTGAAACCTTTTTCACTGTGT GGGCCAACCTGTTCGGCCTCGGCGGCGCCAGCCGTGGTCAGCGCGCCTTGATCCACGGCGGCACCAGCGGCATCGGCACC ACCGCGCTCATGCTGTGCCGCGAGTTTGGCATCGAAGCTTTCGCCACCGCCGGCAGCGCCGATAAATGTGCAGCGATCCG CAATCTGGGCGGCGACGCGATCAACTACCGGGAACAGGAGTTCGCGGCGGTCATCGCCGAGAAAACCGCCAGCCAGGGCG TGAATGTGATCCTCGACATCATGGGCGGCTCATACCTCAACGGGAACATCAGCGCCTTGGGAATGGATGGACGGTTGGTG ATGCTCGGTTTCCTCGGCGGCGCGCGAGCCAATGACATCGATCTGCTGGCGATCCTCGGCAAACGTGCGGTGGTCACCGG TTCCCTCCTCCGCGCCCGTACCTCGGCGGAAAAAGCCGCCATCGCCGATCAATTGCGCGAACACGTCTGGCCGGTGCTGG CCGCCGGACGCTGCCTGCCGATCATCGACAAGGTCTATCCGCTCGCCGAAGCAGCCAAGGCCCATGCGCACATGGAAGCG GGCGACCACATCGGCAAGATCGTGCTGAAGATCGACTGA
Upstream 100 bases:
>100_bases GCCCTCCTCCGTCGAACAACGCTGCTGCGCCGAATGACGGGAATCATTGCGCCCTGACTGCGTTCCCATCTACTGATCAC TTTTTCAAGAGGAATCGAAA
Downstream 100 bases:
>100_bases GTCGTTGCAGCATTTTGTAATCGTTGCGGGTGGGCGGCGGTCGAAAATGTCACGCGCGTGTCCAGGCTTCTGGTAAAAAG CGTTCTTTGTCCACGCGGTG
Product: zinc-containing alcohol dehydrogenase superfamily protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 332; Mature: 331
Protein sequence:
>332_residues MTLPNEMTRIEITEPGGPEVLQSRRVPLPVAAEGEVLIRVHAAGVNRPDALQRAGKYPMKPGMNPIPGLEVAGEVVAIGS GVSTFAVGDRVCALTNGGGYAEYCTVPAGQTLPIPDGLDWIQAAAIPETFFTVWANLFGLGGASRGQRALIHGGTSGIGT TALMLCREFGIEAFATAGSADKCAAIRNLGGDAINYREQEFAAVIAEKTASQGVNVILDIMGGSYLNGNISALGMDGRLV MLGFLGGARANDIDLLAILGKRAVVTGSLLRARTSAEKAAIADQLREHVWPVLAAGRCLPIIDKVYPLAEAAKAHAHMEA GDHIGKIVLKID
Sequences:
>Translated_332_residues MTLPNEMTRIEITEPGGPEVLQSRRVPLPVAAEGEVLIRVHAAGVNRPDALQRAGKYPMKPGMNPIPGLEVAGEVVAIGS GVSTFAVGDRVCALTNGGGYAEYCTVPAGQTLPIPDGLDWIQAAAIPETFFTVWANLFGLGGASRGQRALIHGGTSGIGT TALMLCREFGIEAFATAGSADKCAAIRNLGGDAINYREQEFAAVIAEKTASQGVNVILDIMGGSYLNGNISALGMDGRLV MLGFLGGARANDIDLLAILGKRAVVTGSLLRARTSAEKAAIADQLREHVWPVLAAGRCLPIIDKVYPLAEAAKAHAHMEA GDHIGKIVLKID >Mature_331_residues TLPNEMTRIEITEPGGPEVLQSRRVPLPVAAEGEVLIRVHAAGVNRPDALQRAGKYPMKPGMNPIPGLEVAGEVVAIGSG VSTFAVGDRVCALTNGGGYAEYCTVPAGQTLPIPDGLDWIQAAAIPETFFTVWANLFGLGGASRGQRALIHGGTSGIGTT ALMLCREFGIEAFATAGSADKCAAIRNLGGDAINYREQEFAAVIAEKTASQGVNVILDIMGGSYLNGNISALGMDGRLVM LGFLGGARANDIDLLAILGKRAVVTGSLLRARTSAEKAAIADQLREHVWPVLAAGRCLPIIDKVYPLAEAAKAHAHMEAG DHIGKIVLKID
Specific function: Catalyzes the elongation of N-fatty acyl-CoA with methylamalonyl-CoA (not malonyl-CoA) as the elongating agent to form mycocerosyl lipids [H]
COG id: COG0604
COG function: function code CR; NADPH:quinone reductase and related Zn-dependent oxidoreductases
Gene ontology:
Cell location: Cell membrane; Peripheral membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 acyl carrier domain [H]
Homologues:
Organism=Homo sapiens, GI22538446, Length=330, Percent_Identity=40.9090909090909, Blast_Score=245, Evalue=4e-65, Organism=Homo sapiens, GI22538444, Length=330, Percent_Identity=40.9090909090909, Blast_Score=245, Evalue=4e-65, Organism=Homo sapiens, GI194239674, Length=327, Percent_Identity=31.4984709480122, Blast_Score=159, Evalue=4e-39, Organism=Homo sapiens, GI13236495, Length=327, Percent_Identity=31.4984709480122, Blast_Score=159, Evalue=4e-39, Organism=Homo sapiens, GI18379349, Length=323, Percent_Identity=29.7213622291022, Blast_Score=131, Evalue=8e-31, Organism=Homo sapiens, GI194239676, Length=327, Percent_Identity=29.9694189602446, Blast_Score=126, Evalue=3e-29, Organism=Homo sapiens, GI24308257, Length=347, Percent_Identity=26.2247838616715, Blast_Score=120, Evalue=2e-27, Organism=Homo sapiens, GI28557745, Length=354, Percent_Identity=29.0960451977401, Blast_Score=115, Evalue=6e-26, Organism=Homo sapiens, GI41872631, Length=307, Percent_Identity=26.0586319218241, Blast_Score=84, Evalue=2e-16, Organism=Homo sapiens, GI47519420, Length=367, Percent_Identity=24.7956403269755, Blast_Score=78, Evalue=9e-15, Organism=Homo sapiens, GI197927207, Length=186, Percent_Identity=26.3440860215054, Blast_Score=72, Evalue=1e-12, Organism=Escherichia coli, GI1790485, Length=318, Percent_Identity=29.2452830188679, Blast_Score=103, Evalue=2e-23, Organism=Caenorhabditis elegans, GI17507255, Length=319, Percent_Identity=28.5266457680251, Blast_Score=120, Evalue=7e-28, Organism=Caenorhabditis elegans, GI17536829, Length=215, Percent_Identity=27.4418604651163, Blast_Score=72, Evalue=5e-13, Organism=Caenorhabditis elegans, GI212642053, Length=307, Percent_Identity=25.4071661237785, Blast_Score=72, Evalue=5e-13, Organism=Caenorhabditis elegans, GI71987554, Length=370, Percent_Identity=22.1621621621622, Blast_Score=67, Evalue=1e-11, Organism=Saccharomyces cerevisiae, GI6319520, Length=343, Percent_Identity=26.2390670553936, Blast_Score=89, Evalue=1e-18, Organism=Saccharomyces cerevisiae, GI6323961, Length=309, Percent_Identity=23.6245954692557, Blast_Score=70, Evalue=4e-13, Organism=Saccharomyces cerevisiae, GI6324486, Length=314, Percent_Identity=23.5668789808917, Blast_Score=66, Evalue=6e-12, Organism=Drosophila melanogaster, GI19920632, Length=307, Percent_Identity=25.4071661237785, Blast_Score=96, Evalue=4e-20, Organism=Drosophila melanogaster, GI221330659, Length=307, Percent_Identity=25.4071661237785, Blast_Score=96, Evalue=4e-20, Organism=Drosophila melanogaster, GI24581345, Length=303, Percent_Identity=25.7425742574257, Blast_Score=91, Evalue=1e-18, Organism=Drosophila melanogaster, GI45550423, Length=182, Percent_Identity=26.9230769230769, Blast_Score=67, Evalue=2e-11, Organism=Drosophila melanogaster, GI24581341, Length=361, Percent_Identity=27.9778393351801, Blast_Score=65, Evalue=9e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001227 - InterPro: IPR009081 - InterPro: IPR014043 - InterPro: IPR016035 - InterPro: IPR013149 - InterPro: IPR013154 - InterPro: IPR000794 - InterPro: IPR011032 - InterPro: IPR018201 - InterPro: IPR014031 - InterPro: IPR014030 - InterPro: IPR016036 - InterPro: IPR016040 - InterPro: IPR006163 - InterPro: IPR020842 - InterPro: IPR020801 - InterPro: IPR020841 - InterPro: IPR020807 - InterPro: IPR020843 - InterPro: IPR013968 - InterPro: IPR006162 - InterPro: IPR016039 - InterPro: IPR016038 [H]
Pfam domain/function: PF00698 Acyl_transf_1; PF08240 ADH_N; PF00107 ADH_zinc_N; PF00109 ketoacyl-synt; PF02801 Ketoacyl-synt_C; PF08659 KR; PF00550 PP-binding [H]
EC number: =2.3.1.111 [H]
Molecular weight: Translated: 34597; Mature: 34466
Theoretical pI: Translated: 6.25; Mature: 6.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLPNEMTRIEITEPGGPEVLQSRRVPLPVAAEGEVLIRVHAAGVNRPDALQRAGKYPMK CCCCCCCEEEEEECCCCHHHHHCCCCCCCCCCCCCEEEEEEECCCCCCHHHHHCCCCCCC PGMNPIPGLEVAGEVVAIGSGVSTFAVGDRVCALTNGGGYAEYCTVPAGQTLPIPDGLDW CCCCCCCCCHHCCCEEEECCCCCEEEECCEEEEEECCCCCEEEEECCCCCCCCCCCCHHH IQAAAIPETFFTVWANLFGLGGASRGQRALIHGGTSGIGTTALMLCREFGIEAFATAGSA HHHHHCHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHCCHHEECCCCC DKCAAIRNLGGDAINYREQEFAAVIAEKTASQGVNVILDIMGGSYLNGNISALGMDGRLV HHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEEECCCCEECCCEEEEECCCCEE MLGFLGGARANDIDLLAILGKRAVVTGSLLRARTSAEKAAIADQLREHVWPVLAAGRCLP EEEECCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH IIDKVYPLAEAAKAHAHMEAGDHIGKIVLKID HHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEC >Mature Secondary Structure TLPNEMTRIEITEPGGPEVLQSRRVPLPVAAEGEVLIRVHAAGVNRPDALQRAGKYPMK CCCCCCEEEEEECCCCHHHHHCCCCCCCCCCCCCEEEEEEECCCCCCHHHHHCCCCCCC PGMNPIPGLEVAGEVVAIGSGVSTFAVGDRVCALTNGGGYAEYCTVPAGQTLPIPDGLDW CCCCCCCCCHHCCCEEEECCCCCEEEECCEEEEEECCCCCEEEEECCCCCCCCCCCCHHH IQAAAIPETFFTVWANLFGLGGASRGQRALIHGGTSGIGTTALMLCREFGIEAFATAGSA HHHHHCHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHCCHHEECCCCC DKCAAIRNLGGDAINYREQEFAAVIAEKTASQGVNVILDIMGGSYLNGNISALGMDGRLV HHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEEECCCCEECCCEEEEECCCCEE MLGFLGGARANDIDLLAILGKRAVVTGSLLRARTSAEKAAIADQLREHVWPVLAAGRCLP EEEECCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH IIDKVYPLAEAAKAHAHMEAGDHIGKIVLKID HHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 1527058; 12788972 [H]