Definition Pseudomonas fluorescens Pf0-1 chromosome, complete genome.
Accession NC_007492
Length 6,438,405

Click here to switch to the map view.

The map label for this gene is yjiJ [C]

Identifier: 77458180

GI number: 77458180

Start: 2227331

End: 2228551

Strand: Reverse

Name: yjiJ [C]

Synonym: Pfl01_1953

Alternate gene names: 77458180

Gene position: 2228551-2227331 (Counterclockwise)

Preceding gene: 77458182

Following gene: 77458179

Centisome position: 34.61

GC content: 64.21

Gene sequence:

>1221_bases
ATGCACACTTCAATTGCTTCGCCCGAACGTCCGGACACAAGTGTCTGGCTGGCGATCTTCGCCGGACTCTGCGCCAGCCT
GGTCAGCATCGGTCTGGCGCGTTTCGCCTACACACCGCTGATCCCTTCGCTGATTCAGGCGCAGTGGTTTTCCGCCCATG
ATGTGGTCTATCTCGGCGCGGCCAATCTGGTCGGTTACCTGATCGGCGCCCTCCTCGGCCGCCCGCTGGCACGCCGGCTT
ACCCAGAGAAACGCTCTGCGCCTGATGATGCTGGCGGTGACCGTGGCGTTTTTTGCCTGTGCGTACCCCGTGTCGGTGAG
TTGGTATTTCGGCTGGCGCCTGCTGTCGGGAATCGCGGGCGGCGCGATCATGGTGCTGGTGGCTGCGACTGTATTGCCCC
ATGTACCGGCCGCGCGCAAAGGCCTGGCCAGTGGGGCGATTTTCCTCGGCATCGGTCTGGGCATCGCCGGCTCGGGCACG
ATCGTTCCGCTGCTGTTGAGCCTGGGCTTGCAAGCAACGTGGCTGGGATTGGGCGCTTTGTCGCTGGCACTGACGGCATT
GAGCTGGTTCGGCTGGCCCTCGGAGCTGCCCCATGCAACCACCGCAACGGCTCAGGTGGAACCGGTCGAGCCGACACCGC
CCGCTGTTTATCTGCTGTTTGCCCAGTACGCATTCATGGCTGCCGGGCTGGTACCGGCCATGGTCTTTCTGGTGGATTAC
GTCGCCCGTGGCCTGGGCGCCGGGGCGCACGTCGGCGCGCTGATCTGGGTCATGTACGGTCTGGGCGCCATCGTCGGCCC
GGTGAGTTATGGCTTTCTCGCCGACCACCTCGGCGCGCGGACCGGCATTCGTGTGGTGCTGGTGGTGCAGGCGATCACCC
TGGGTTTGCTGGCGGTTTCGCATTCGTTCCTGGCGTTGGCGCTGCTGGCGGTGGTCCTCGGTTCCTTTCCACCGGGCATT
GTGCCGCTGGCATTGGCTCGGGTGCATGAGCTGGTGCCGGATCACCATCGCCAACAGGTGGCGTGGAGCCGGGCCACAGT
GTCGTTCGCCACGTTTCAGGCGCTGGCCGGGTTCGCCTATTCGGCGCTGTTCAACGCCACGGGCGGACAGCATGTGTTGC
TCTTCGTGATAGCCGGCGGTGCCATCTTGATCGCTCTGATACTTGAGTACGCCATGAAATTGCTGCCCTCCTCCGTCGAA
CAACGCTGCTGCGCCGAATGA

Upstream 100 bases:

>100_bases
TTGATGCATAAACGCATCACTATCACGAAAACTCGCTGCATTAACGCAGCAACGATAGCCGATATGCTGGGCGCCATAAA
CCTTTCAAAGGATTGCCGTG

Downstream 100 bases:

>100_bases
CGGGAATCATTGCGCCCTGACTGCGTTCCCATCTACTGATCACTTTTTCAAGAGGAATCGAAAATGACGTTGCCCAATGA
AATGACCCGAATCGAAATCA

Product: hypothetical protein

Products: NA

Alternate protein names: Facilitator Family Transporter; Facilitator Superfamily Protein; Facilitator Superfamily Transporter; Transporter-Like Membrane Protein; Facilitator Superfamily Permease

Number of amino acids: Translated: 406; Mature: 406

Protein sequence:

>406_residues
MHTSIASPERPDTSVWLAIFAGLCASLVSIGLARFAYTPLIPSLIQAQWFSAHDVVYLGAANLVGYLIGALLGRPLARRL
TQRNALRLMMLAVTVAFFACAYPVSVSWYFGWRLLSGIAGGAIMVLVAATVLPHVPAARKGLASGAIFLGIGLGIAGSGT
IVPLLLSLGLQATWLGLGALSLALTALSWFGWPSELPHATTATAQVEPVEPTPPAVYLLFAQYAFMAAGLVPAMVFLVDY
VARGLGAGAHVGALIWVMYGLGAIVGPVSYGFLADHLGARTGIRVVLVVQAITLGLLAVSHSFLALALLAVVLGSFPPGI
VPLALARVHELVPDHHRQQVAWSRATVSFATFQALAGFAYSALFNATGGQHVLLFVIAGGAILIALILEYAMKLLPSSVE
QRCCAE

Sequences:

>Translated_406_residues
MHTSIASPERPDTSVWLAIFAGLCASLVSIGLARFAYTPLIPSLIQAQWFSAHDVVYLGAANLVGYLIGALLGRPLARRL
TQRNALRLMMLAVTVAFFACAYPVSVSWYFGWRLLSGIAGGAIMVLVAATVLPHVPAARKGLASGAIFLGIGLGIAGSGT
IVPLLLSLGLQATWLGLGALSLALTALSWFGWPSELPHATTATAQVEPVEPTPPAVYLLFAQYAFMAAGLVPAMVFLVDY
VARGLGAGAHVGALIWVMYGLGAIVGPVSYGFLADHLGARTGIRVVLVVQAITLGLLAVSHSFLALALLAVVLGSFPPGI
VPLALARVHELVPDHHRQQVAWSRATVSFATFQALAGFAYSALFNATGGQHVLLFVIAGGAILIALILEYAMKLLPSSVE
QRCCAE
>Mature_406_residues
MHTSIASPERPDTSVWLAIFAGLCASLVSIGLARFAYTPLIPSLIQAQWFSAHDVVYLGAANLVGYLIGALLGRPLARRL
TQRNALRLMMLAVTVAFFACAYPVSVSWYFGWRLLSGIAGGAIMVLVAATVLPHVPAARKGLASGAIFLGIGLGIAGSGT
IVPLLLSLGLQATWLGLGALSLALTALSWFGWPSELPHATTATAQVEPVEPTPPAVYLLFAQYAFMAAGLVPAMVFLVDY
VARGLGAGAHVGALIWVMYGLGAIVGPVSYGFLADHLGARTGIRVVLVVQAITLGLLAVSHSFLALALLAVVLGSFPPGI
VPLALARVHELVPDHHRQQVAWSRATVSFATFQALAGFAYSALFNATGGQHVLLFVIAGGAILIALILEYAMKLLPSSVE
QRCCAE

Specific function: Unknown

COG id: COG0477

COG function: function code GEPR; Permeases of the major facilitator superfamily

Gene ontology:

Cell location: Integral Membrane Protein [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 42467; Mature: 42467

Theoretical pI: Translated: 9.08; Mature: 9.08

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHCCCCCEEEEEEHHHHHHHHHHHHHHHHHHCCHHHHHHHCCC
>Mature Secondary Structure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HHHHHCCCCCEEEEEEHHHHHHHHHHHHHHHHHHCCHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA