| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77458080
Identifier: 77458080
GI number: 77458080
Start: 2109176
End: 2110546
Strand: Reverse
Name: 77458080
Synonym: Pfl01_1853
Alternate gene names: NA
Gene position: 2110546-2109176 (Counterclockwise)
Preceding gene: 77458082
Following gene: 77458079
Centisome position: 32.78
GC content: 61.27
Gene sequence:
>1371_bases ATGACAAAACCACGTTCGAAAAAGGCTCTTTTCATTGGCCTGCCACTGGCCCTGGCGATCAGTGCCGCAGCAGGCTTCGC AGCCTGGGATTACTGGCTCAACGACAATCCCGGCTATCCGGTCAAGGTGATGGACCAGGCCCGCGAGATGCACCAGCACC TGCTGTCCTTCGACAGCCACATCACCGTCCTTCAGGACTTCGGCACCCACGGCAATGAAGCCGACAAGGACGGCCCCGGT CAGTTCGACCTGATAAAAGCCAATCGCGGGCAACTGTCCGGTGCAGCACTGACGATTTTCGGCTGGCCGGAACTGTGGAA CGGCGCCAATGCGCCGCACAAGCCTACGGCGGGTTTCGTTGAAGAGGCACGCAACCAGCAGGAGATCCGCTACAAGATCA TCTCCGGGATGGTCCGCGACTTCCCCAATCAGGTCGGGATTGCCTACACGCCCGAAGATTTTCGGCGCCTGCACGGTGAA GGCAAGTTCGCGATCTTCATCAGCATGCTCAACGCCTACCCGCTGGGCCACGACCTGAACCTGCTGGACCTGTGGACGGC GCGTGGCATGCGCATGTTCGGTTTCAGCTACATCGGCAACAACGATTGGGCCGACTCATCCCGGCCGCTGCCGTTCTTCA ATGATTCGCCGGATGCACTCGACGGCCTCTCCGACCTCGGCAAACAAGCGGTCAAGCGTCTCAACGATTTGGGCGTGATC ATCGATGTGTCACAGATGTCGACCAAAGCCCTGGAGCAAGTCGCGCAACTGAGCCGCACGCCGATGGTGGCCTCGCACTC GGCGCCACGGGCGATGGTCGACATCCCCCGCAACCTCAGCGACAAAGAACTGCAACTGATCAAGAACAGCGGCGGCGTGG TGCAGGTGGTGGGCTTCTCGCAGTACCTGCGCCCGCTGACCCAGACCACCCAGGACAAGCTCAACGAACTGCGCAAAAGC TTTGACCTGCCGCCACTGCCCAACCTCGCCGTGGCACTGATGCCGGGCGACCCGATCATCGCCGCATGGCCCGAGGCCAA GTTCGGCCAGTACGCCAGCCGCCTCTACGCGATCCTCGACGAAGAACCCAAAGCCACGCTCAAGGACTACGGCGACGCCA TCGATTACACCGTGCGCAAGATCGGTATCGACCACGTCGGCATCAGCTCCGACTTCAACGAAGGCGGCGGCGTCAAAGGC TGGGAGAACGTCGGCGACATCCCCAACGTCACCGCCGAACTGATTTCGCGCGGCTACTCCGAAGCAGACATCGCCAAGCT CTGGGGCGGCAACTTCCTGCGGGTCTGGGATCAGGTGCAGAAAGCCGCCCGACCTGCGCTGATTTCACAGCAGGACAAGA TCAAGCCATGA
Upstream 100 bases:
>100_bases CAGGGCGATGCGACTAAATTTCGTTGCCAATCACTCGTTCTTTCCAGATAGCAATGGCCCCTGCGCCAGCACCTTGACGG CGAACCTGACTGAGATGGCA
Downstream 100 bases:
>100_bases GTGATCGTCGTACGTTTCTCAAGCAGGCGGGGATTCTCGCCGCCGGCCTGCCGCTGGCCTCGGGCATCGCCCACGGCGCC AGCACCGACAACACCACGAA
Product: peptidase M19, renal dipeptidase
Products: NA
Alternate protein names: ORF R [H]
Number of amino acids: Translated: 456; Mature: 455
Protein sequence:
>456_residues MTKPRSKKALFIGLPLALAISAAAGFAAWDYWLNDNPGYPVKVMDQAREMHQHLLSFDSHITVLQDFGTHGNEADKDGPG QFDLIKANRGQLSGAALTIFGWPELWNGANAPHKPTAGFVEEARNQQEIRYKIISGMVRDFPNQVGIAYTPEDFRRLHGE GKFAIFISMLNAYPLGHDLNLLDLWTARGMRMFGFSYIGNNDWADSSRPLPFFNDSPDALDGLSDLGKQAVKRLNDLGVI IDVSQMSTKALEQVAQLSRTPMVASHSAPRAMVDIPRNLSDKELQLIKNSGGVVQVVGFSQYLRPLTQTTQDKLNELRKS FDLPPLPNLAVALMPGDPIIAAWPEAKFGQYASRLYAILDEEPKATLKDYGDAIDYTVRKIGIDHVGISSDFNEGGGVKG WENVGDIPNVTAELISRGYSEADIAKLWGGNFLRVWDQVQKAARPALISQQDKIKP
Sequences:
>Translated_456_residues MTKPRSKKALFIGLPLALAISAAAGFAAWDYWLNDNPGYPVKVMDQAREMHQHLLSFDSHITVLQDFGTHGNEADKDGPG QFDLIKANRGQLSGAALTIFGWPELWNGANAPHKPTAGFVEEARNQQEIRYKIISGMVRDFPNQVGIAYTPEDFRRLHGE GKFAIFISMLNAYPLGHDLNLLDLWTARGMRMFGFSYIGNNDWADSSRPLPFFNDSPDALDGLSDLGKQAVKRLNDLGVI IDVSQMSTKALEQVAQLSRTPMVASHSAPRAMVDIPRNLSDKELQLIKNSGGVVQVVGFSQYLRPLTQTTQDKLNELRKS FDLPPLPNLAVALMPGDPIIAAWPEAKFGQYASRLYAILDEEPKATLKDYGDAIDYTVRKIGIDHVGISSDFNEGGGVKG WENVGDIPNVTAELISRGYSEADIAKLWGGNFLRVWDQVQKAARPALISQQDKIKP >Mature_455_residues TKPRSKKALFIGLPLALAISAAAGFAAWDYWLNDNPGYPVKVMDQAREMHQHLLSFDSHITVLQDFGTHGNEADKDGPGQ FDLIKANRGQLSGAALTIFGWPELWNGANAPHKPTAGFVEEARNQQEIRYKIISGMVRDFPNQVGIAYTPEDFRRLHGEG KFAIFISMLNAYPLGHDLNLLDLWTARGMRMFGFSYIGNNDWADSSRPLPFFNDSPDALDGLSDLGKQAVKRLNDLGVII DVSQMSTKALEQVAQLSRTPMVASHSAPRAMVDIPRNLSDKELQLIKNSGGVVQVVGFSQYLRPLTQTTQDKLNELRKSF DLPPLPNLAVALMPGDPIIAAWPEAKFGQYASRLYAILDEEPKATLKDYGDAIDYTVRKIGIDHVGISSDFNEGGGVKGW ENVGDIPNVTAELISRGYSEADIAKLWGGNFLRVWDQVQKAARPALISQQDKIKP
Specific function: Unknown
COG id: COG2355
COG function: function code E; Zn-dependent dipeptidase, microsomal dipeptidase homolog
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M19 family [H]
Homologues:
Organism=Homo sapiens, GI11641269, Length=291, Percent_Identity=26.1168384879725, Blast_Score=108, Evalue=1e-23, Organism=Homo sapiens, GI189458885, Length=387, Percent_Identity=25.3229974160207, Blast_Score=101, Evalue=1e-21, Organism=Homo sapiens, GI4758190, Length=387, Percent_Identity=25.3229974160207, Blast_Score=101, Evalue=1e-21, Organism=Homo sapiens, GI193211608, Length=141, Percent_Identity=32.6241134751773, Blast_Score=82, Evalue=1e-15, Organism=Homo sapiens, GI193211610, Length=141, Percent_Identity=33.3333333333333, Blast_Score=80, Evalue=5e-15, Organism=Drosophila melanogaster, GI281362638, Length=181, Percent_Identity=29.2817679558011, Blast_Score=94, Evalue=2e-19, Organism=Drosophila melanogaster, GI281362636, Length=181, Percent_Identity=29.2817679558011, Blast_Score=94, Evalue=2e-19, Organism=Drosophila melanogaster, GI221475880, Length=310, Percent_Identity=24.1935483870968, Blast_Score=88, Evalue=1e-17, Organism=Drosophila melanogaster, GI161083233, Length=256, Percent_Identity=25.78125, Blast_Score=81, Evalue=1e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000180 - InterPro: IPR008257 [H]
Pfam domain/function: PF01244 Peptidase_M19 [H]
EC number: NA
Molecular weight: Translated: 50361; Mature: 50230
Theoretical pI: Translated: 6.26; Mature: 6.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKPRSKKALFIGLPLALAISAAAGFAAWDYWLNDNPGYPVKVMDQAREMHQHLLSFDSH CCCCCCCCEEEEECHHHHHHHHHHCHHEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCC ITVLQDFGTHGNEADKDGPGQFDLIKANRGQLSGAALTIFGWPELWNGANAPHKPTAGFV CHHHHHCCCCCCCCCCCCCCCEEEEECCCCCCCCCEEEEEECHHHCCCCCCCCCCCHHHH EEARNQQEIRYKIISGMVRDFPNQVGIAYTPEDFRRLHGEGKFAIFISMLNAYPLGHDLN HHHCCHHHHHHHHHHHHHHHCCHHCCEEECHHHHHHHCCCCCEEEEEEHHHCCCCCCCCC LLDLWTARGMRMFGFSYIGNNDWADSSRPLPFFNDSPDALDGLSDLGKQAVKRLNDLGVI HHHHHHHCCCCHHEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCEE IDVSQMSTKALEQVAQLSRTPMVASHSAPRAMVDIPRNLSDKELQLIKNSGGVVQVVGFS EEHHHHHHHHHHHHHHHHCCCCEECCCCCCHHHCCCCCCCHHHHHHHCCCCCEEEEECHH QYLRPLTQTTQDKLNELRKSFDLPPLPNLAVALMPGDPIIAAWPEAKFGQYASRLYAILD HHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCEEEECCCHHHHHHHHHHHHHHC EEPKATLKDYGDAIDYTVRKIGIDHVGISSDFNEGGGVKGWENVGDIPNVTAELISRGYS CCCCHHHHHHCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCC EADIAKLWGGNFLRVWDQVQKAARPALISQQDKIKP HHHHHHHHCCCHHHHHHHHHHHHCCCCCCCHHCCCC >Mature Secondary Structure TKPRSKKALFIGLPLALAISAAAGFAAWDYWLNDNPGYPVKVMDQAREMHQHLLSFDSH CCCCCCCEEEEECHHHHHHHHHHCHHEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCC ITVLQDFGTHGNEADKDGPGQFDLIKANRGQLSGAALTIFGWPELWNGANAPHKPTAGFV CHHHHHCCCCCCCCCCCCCCCEEEEECCCCCCCCCEEEEEECHHHCCCCCCCCCCCHHHH EEARNQQEIRYKIISGMVRDFPNQVGIAYTPEDFRRLHGEGKFAIFISMLNAYPLGHDLN HHHCCHHHHHHHHHHHHHHHCCHHCCEEECHHHHHHHCCCCCEEEEEEHHHCCCCCCCCC LLDLWTARGMRMFGFSYIGNNDWADSSRPLPFFNDSPDALDGLSDLGKQAVKRLNDLGVI HHHHHHHCCCCHHEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCEE IDVSQMSTKALEQVAQLSRTPMVASHSAPRAMVDIPRNLSDKELQLIKNSGGVVQVVGFS EEHHHHHHHHHHHHHHHHCCCCEECCCCCCHHHCCCCCCCHHHHHHHCCCCCEEEEECHH QYLRPLTQTTQDKLNELRKSFDLPPLPNLAVALMPGDPIIAAWPEAKFGQYASRLYAILD HHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCEEEECCCHHHHHHHHHHHHHHC EEPKATLKDYGDAIDYTVRKIGIDHVGISSDFNEGGGVKGWENVGDIPNVTAELISRGYS CCCCHHHHHHCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCC EADIAKLWGGNFLRVWDQVQKAARPALISQQDKIKP HHHHHHHHCCCHHHHHHHHHHHHCCCCCCCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2536663 [H]