| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is nemA [C]
Identifier: 77457111
GI number: 77457111
Start: 1031419
End: 1032522
Strand: Direct
Name: nemA [C]
Synonym: Pfl01_0884
Alternate gene names: 77457111
Gene position: 1031419-1032522 (Clockwise)
Preceding gene: 77457110
Following gene: 77457114
Centisome position: 16.02
GC content: 61.96
Gene sequence:
>1104_bases ATGCCCGTGCAAGCCCTGTTCAAACCGTTCCAGCTCGGTGCCCTCGAACTGCCGACCCGCGTGGTCATGGCGCCGATGAC CCGTTCGTTTTCCCCGGGTGGCGTACCCAATTCCAAAGTGATCGAATACTACCGTCGTCGTGCGGCGGCCGGTGTCGGCC TGATCATCACTGAAGGCACCACCGTTGGCCACCAGGCTTCCAACGGTTACCCGAACGTGCCGCACTTCTACGGTGAAGCG GCGTTGGCCGGCTGGAAAAAAGTCGTGGAGGCGGTACACGCAGAAGGCGGCAAGATCGTTCCGCAACTGTGGCACGTCGG CAATGTGCGCCGTCTGGGCACCGAGCCAGACGCGAGCGTGCCGGGTTACGGCCCGTCGGAAAAACTCAAGGACGGTCAGG TCGTCGTACACCGCATGACCAAACAGGACATCCAGGACGTGATCGCAGCCTTCGCCCAAGCGGCGAAAGATGCCCAAAGC ATCGGCATGGACGGCGTGGAAATCCACGGCGCCCACGGTTACCTGATCGACCAGTTCTTCTGGGAAGGCAGCAATCAGCG CACTGACGAATACGGTGGCAGCCTGGCCAACCGTTCGCGTTTCGCCATCGAGCTGATCCAGGCCGTACGCGCCGCTGTTG GCGAAGGCTTCCCGATCATCTTCCGCTTCTCGCAGTGGAAACAGCAGGACTACACCGCGCGTCTGGTGCAAACCGCCGAA GCGCTGGGCGAATTCCTCAAGCCGTTGTCCGACGCAGGCGTGGACATTTTCCACTGCTCGACGCGGCGTTTCTGGGAGCC GGAATTCGACGGTTCCGACCTGAACCTGGCCGGCTGGACACGCAAACTGACGGGCAAACCGACCATCACCGTCGGCAGCG TCGGCCTCGATGGCGAGTTCCTGCAGTTCATGGTCAACACCGACAAGGTCGCGCAACCGGCCAGTCTGGAAAAACTGCTG GAGCGTCTGAACAACGAAGAATTCGATCTGGTGGCGGTGGGGCGTGCGCTGCTGGTCGATCCGGACTGGGCGCAGAAAGT GCGCGAAGGCCGCGAGCAGGACATTCTGCCGTTCAGCCGTGAGGCGTTGATGACGCTGGTTTGA
Upstream 100 bases:
>100_bases ATCATTCAGATCAATAGTGCTAGCAGCTGGGTGGAACTAAACATATTATCGCCGTCATATGAATCGCATGCCCGTCGATA ACCTTTTCGTGGAGCCTCCC
Downstream 100 bases:
>100_bases TCGTCGTGGGAGGCTTGTCGCGCAGGTCGCGGCAAGCCCCCAGCAAATGGTTTTCAAATTGTTCGACGATAGCTGCCCAA CCCTGGCGGCTGGCGTGTTG
Product: NADH:flavin oxidoreductase/NADH oxidase
Products: NADP; Cytotoxic compound [C]
Alternate protein names: NA
Number of amino acids: Translated: 367; Mature: 366
Protein sequence:
>367_residues MPVQALFKPFQLGALELPTRVVMAPMTRSFSPGGVPNSKVIEYYRRRAAAGVGLIITEGTTVGHQASNGYPNVPHFYGEA ALAGWKKVVEAVHAEGGKIVPQLWHVGNVRRLGTEPDASVPGYGPSEKLKDGQVVVHRMTKQDIQDVIAAFAQAAKDAQS IGMDGVEIHGAHGYLIDQFFWEGSNQRTDEYGGSLANRSRFAIELIQAVRAAVGEGFPIIFRFSQWKQQDYTARLVQTAE ALGEFLKPLSDAGVDIFHCSTRRFWEPEFDGSDLNLAGWTRKLTGKPTITVGSVGLDGEFLQFMVNTDKVAQPASLEKLL ERLNNEEFDLVAVGRALLVDPDWAQKVREGREQDILPFSREALMTLV
Sequences:
>Translated_367_residues MPVQALFKPFQLGALELPTRVVMAPMTRSFSPGGVPNSKVIEYYRRRAAAGVGLIITEGTTVGHQASNGYPNVPHFYGEA ALAGWKKVVEAVHAEGGKIVPQLWHVGNVRRLGTEPDASVPGYGPSEKLKDGQVVVHRMTKQDIQDVIAAFAQAAKDAQS IGMDGVEIHGAHGYLIDQFFWEGSNQRTDEYGGSLANRSRFAIELIQAVRAAVGEGFPIIFRFSQWKQQDYTARLVQTAE ALGEFLKPLSDAGVDIFHCSTRRFWEPEFDGSDLNLAGWTRKLTGKPTITVGSVGLDGEFLQFMVNTDKVAQPASLEKLL ERLNNEEFDLVAVGRALLVDPDWAQKVREGREQDILPFSREALMTLV >Mature_366_residues PVQALFKPFQLGALELPTRVVMAPMTRSFSPGGVPNSKVIEYYRRRAAAGVGLIITEGTTVGHQASNGYPNVPHFYGEAA LAGWKKVVEAVHAEGGKIVPQLWHVGNVRRLGTEPDASVPGYGPSEKLKDGQVVVHRMTKQDIQDVIAAFAQAAKDAQSI GMDGVEIHGAHGYLIDQFFWEGSNQRTDEYGGSLANRSRFAIELIQAVRAAVGEGFPIIFRFSQWKQQDYTARLVQTAEA LGEFLKPLSDAGVDIFHCSTRRFWEPEFDGSDLNLAGWTRKLTGKPTITVGSVGLDGEFLQFMVNTDKVAQPASLEKLLE RLNNEEFDLVAVGRALLVDPDWAQKVREGREQDILPFSREALMTLV
Specific function: Reduces a range of alternative electron acceptors [H]
COG id: COG1902
COG function: function code C; NADH:flavin oxidoreductases, Old Yellow Enzyme family
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: In the N-terminal section; belongs to the NADH:flavin oxidoreductase/NADH oxidase family [H]
Homologues:
Organism=Escherichia coli, GI1787939, Length=224, Percent_Identity=37.5, Blast_Score=154, Evalue=7e-39, Organism=Escherichia coli, GI1789463, Length=371, Percent_Identity=29.9191374663073, Blast_Score=139, Evalue=2e-34, Organism=Caenorhabditis elegans, GI17559802, Length=331, Percent_Identity=27.190332326284, Blast_Score=87, Evalue=1e-17, Organism=Caenorhabditis elegans, GI17559804, Length=349, Percent_Identity=26.0744985673352, Blast_Score=82, Evalue=5e-16, Organism=Caenorhabditis elegans, GI17564188, Length=198, Percent_Identity=29.2929292929293, Blast_Score=81, Evalue=1e-15, Organism=Caenorhabditis elegans, GI17540738, Length=247, Percent_Identity=29.5546558704453, Blast_Score=80, Evalue=2e-15, Organism=Caenorhabditis elegans, GI17565138, Length=209, Percent_Identity=31.1004784688995, Blast_Score=80, Evalue=2e-15, Organism=Caenorhabditis elegans, GI72001454, Length=68, Percent_Identity=50, Blast_Score=77, Evalue=1e-14, Organism=Caenorhabditis elegans, GI17566914, Length=196, Percent_Identity=30.6122448979592, Blast_Score=76, Evalue=2e-14, Organism=Caenorhabditis elegans, GI17566916, Length=262, Percent_Identity=26.3358778625954, Blast_Score=68, Evalue=6e-12, Organism=Saccharomyces cerevisiae, GI6321973, Length=222, Percent_Identity=39.6396396396396, Blast_Score=147, Evalue=4e-36, Organism=Saccharomyces cerevisiae, GI6325086, Length=222, Percent_Identity=37.8378378378378, Blast_Score=144, Evalue=3e-35,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR013027 - InterPro: IPR016040 - InterPro: IPR001155 - InterPro: IPR001327 - InterPro: IPR000103 [H]
Pfam domain/function: PF00724 Oxidored_FMN; PF00070 Pyr_redox; PF07992 Pyr_redox_2 [H]
EC number: 1.-.-.- [C]
Molecular weight: Translated: 40394; Mature: 40263
Theoretical pI: Translated: 6.12; Mature: 6.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPVQALFKPFQLGALELPTRVVMAPMTRSFSPGGVPNSKVIEYYRRRAAAGVGLIITEGT CCHHHHHCHHHCCCHHCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCEEEEECCC TVGHQASNGYPNVPHFYGEAALAGWKKVVEAVHAEGGKIVPQLWHVGNVRRLGTEPDASV CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCCCCCCCCCCC PGYGPSEKLKDGQVVVHRMTKQDIQDVIAAFAQAAKDAQSIGMDGVEIHGAHGYLIDQFF CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHH WEGSNQRTDEYGGSLANRSRFAIELIQAVRAAVGEGFPIIFRFSQWKQQDYTARLVQTAE HCCCCCCCHHHCCCHHCCHHHHHHHHHHHHHHHCCCCEEEEEECHHHHHHHHHHHHHHHH ALGEFLKPLSDAGVDIFHCSTRRFWEPEFDGSDLNLAGWTRKLTGKPTITVGSVGLDGEF HHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCCEEECCCCCEEEEECCCCCHHH LQFMVNTDKVAQPASLEKLLERLNNEEFDLVAVGRALLVDPDWAQKVREGREQDILPFSR HHHHHCCCCCCCCHHHHHHHHHHCCCCEEEEEECCEEEECCHHHHHHHCCCCCCCCCCCH EALMTLV HHHHHCC >Mature Secondary Structure PVQALFKPFQLGALELPTRVVMAPMTRSFSPGGVPNSKVIEYYRRRAAAGVGLIITEGT CHHHHHCHHHCCCHHCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCEEEEECCC TVGHQASNGYPNVPHFYGEAALAGWKKVVEAVHAEGGKIVPQLWHVGNVRRLGTEPDASV CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCCCCCCCCCCC PGYGPSEKLKDGQVVVHRMTKQDIQDVIAAFAQAAKDAQSIGMDGVEIHGAHGYLIDQFF CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHH WEGSNQRTDEYGGSLANRSRFAIELIQAVRAAVGEGFPIIFRFSQWKQQDYTARLVQTAE HCCCCCCCHHHCCCHHCCHHHHHHHHHHHHHHHCCCCEEEEEECHHHHHHHHHHHHHHHH ALGEFLKPLSDAGVDIFHCSTRRFWEPEFDGSDLNLAGWTRKLTGKPTITVGSVGLDGEF HHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCCEEECCCCCEEEEECCCCCHHH LQFMVNTDKVAQPASLEKLLERLNNEEFDLVAVGRALLVDPDWAQKVREGREQDILPFSR HHHHHCCCCCCCCHHHHHHHHHHCCCCEEEEEECCEEEECCHHHHHHHCCCCCCCCCCCH EALMTLV HHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: FMN. [C]
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NADPH; N-ethylmaleimide [C]
Specific reaction: NADPH + N-ethylmaleimide = NADP + Cytotoxic compound [C]
General reaction: Reduction [C]
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8357835 [H]