Definition Pseudomonas fluorescens Pf0-1 chromosome, complete genome.
Accession NC_007492
Length 6,438,405

Click here to switch to the map view.

The map label for this gene is 77456571

Identifier: 77456571

GI number: 77456571

Start: 386745

End: 388034

Strand: Reverse

Name: 77456571

Synonym: Pfl01_0343

Alternate gene names: NA

Gene position: 388034-386745 (Counterclockwise)

Preceding gene: 77456572

Following gene: 77456570

Centisome position: 6.03

GC content: 57.36

Gene sequence:

>1290_bases
ATGAAGTGGTTACGGGCTATCGCCCTGATGGCCGGCCTCGCCCGCTCAACAACTGGCGCTGCCGAGTTCTATGAAGACAA
GCCGCTGGCTCACCCGCTGATCCAGGGCTTGCAGGAAAGCTCGATGACTCTGGCGTTCATCAAGGAAACGAACGGCGTCA
AAGGCTATTACTGCCGTTGCGACACGCCGGGCGAACGCCCGCAACTGCTTGATGAGTTCGGTCAGGTGAACATCGAATCG
GTTTTTCTCATGTCGCTCGACAGTGAGGATCCGACCCGCTTCGTGCTTTTTCGGCAAAACGACCGCTACAAAATCTACGC
CTACAAATACAACGCCAACGACCACCTCTACAGCCGCGTCACGCGATTGCAGCCGGCGCTGGACCGCATCGCCGAAGGTC
GCAAACACCTCGACGCCCTGACCATCAAGAAGGCTCTGAGCCAAATCACCCCGCTCAACTACAGCCTCTTCCTTGAAGAG
TCCGGCATACCGGAATTCGACCAGCTCGATTTCAGCCAAGGGAAACTGGTGAGCTTTTACGGCCAGTACTACGACCCACT
GAGCGACCCGACGCCAGATGACGAACCTTACTTCTTCAAGAAGACCTATCAGGAAAAAAACGGCCGGTTCCTTACCGTTA
CTTTCTGGCGATGGCTCGACCAGACGCTCGTCGAGGGCAAGCGCACGCTCTACAACTATCGGGTGAGGCGTATTGCCTGG
GAAACCGAACCGACTAAATTCACCGGCAGCGAAGACGGCCAATCGGTGTCTTATGATTCCGGCTCGCTCTCGGCCCAAGG
TGCCTACAAGCAGGGCGTTCGGGTCGGTCCGTGGTCTTCTTCCAAAGACGAGAAATATTCGGAGTCCGGCAATTTCGTAG
AGGGCAAACGAGAGGGCCAGTGGACGCTGTACCAGGATGGGCAAACACTGGAGGGCGAATTCCACAATGATTTGCGCGAG
GGTCGTTGGCAGCTTCTCAACCACGACGACATGGAATGGGTCGCCACCGGATTCCAGACCTATGTCCACGGCCAACTCAA
CGGCCTGAGTGAATTGACTGTTCGTGGCACTACCGAGCGCGGCGAATATCGCGATGACAAACGCCAAGGCCTCTGGGTGA
CCAGACTCGACAATGGCCACACCCTCAACGTCAACTTCGTTGACGACGTAAAGGAAGGCGAATGGCGCGAAGTCGACGCC
AAGGGTGTGCCGGTCCTGATCGAGCACTACAAGGCAGGTGTCCTGTCCGGCGCCCGCGAAAATACGGGTGCGCCTGGCGC
CGCGCAATAA

Upstream 100 bases:

>100_bases
CAAAGAAAGGCCTCCTTCGGGAGGCCTTTTTTGTGCCCGCTCATCCATGGATAATCCGCCGCTTTCGCGCCACGACCGGC
GCCTTGACGAAGGGATTCGC

Downstream 100 bases:

>100_bases
ATCCTGAGCGGTTTGTGTGAGCAGATATTGTCCCGATTGGGCTTACCGCCGCCCCTGGCCTATGCTGCAAGCCAATCTCA
TTGTTGATCGGTCGAATCCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 429; Mature: 429

Protein sequence:

>429_residues
MKWLRAIALMAGLARSTTGAAEFYEDKPLAHPLIQGLQESSMTLAFIKETNGVKGYYCRCDTPGERPQLLDEFGQVNIES
VFLMSLDSEDPTRFVLFRQNDRYKIYAYKYNANDHLYSRVTRLQPALDRIAEGRKHLDALTIKKALSQITPLNYSLFLEE
SGIPEFDQLDFSQGKLVSFYGQYYDPLSDPTPDDEPYFFKKTYQEKNGRFLTVTFWRWLDQTLVEGKRTLYNYRVRRIAW
ETEPTKFTGSEDGQSVSYDSGSLSAQGAYKQGVRVGPWSSSKDEKYSESGNFVEGKREGQWTLYQDGQTLEGEFHNDLRE
GRWQLLNHDDMEWVATGFQTYVHGQLNGLSELTVRGTTERGEYRDDKRQGLWVTRLDNGHTLNVNFVDDVKEGEWREVDA
KGVPVLIEHYKAGVLSGARENTGAPGAAQ

Sequences:

>Translated_429_residues
MKWLRAIALMAGLARSTTGAAEFYEDKPLAHPLIQGLQESSMTLAFIKETNGVKGYYCRCDTPGERPQLLDEFGQVNIES
VFLMSLDSEDPTRFVLFRQNDRYKIYAYKYNANDHLYSRVTRLQPALDRIAEGRKHLDALTIKKALSQITPLNYSLFLEE
SGIPEFDQLDFSQGKLVSFYGQYYDPLSDPTPDDEPYFFKKTYQEKNGRFLTVTFWRWLDQTLVEGKRTLYNYRVRRIAW
ETEPTKFTGSEDGQSVSYDSGSLSAQGAYKQGVRVGPWSSSKDEKYSESGNFVEGKREGQWTLYQDGQTLEGEFHNDLRE
GRWQLLNHDDMEWVATGFQTYVHGQLNGLSELTVRGTTERGEYRDDKRQGLWVTRLDNGHTLNVNFVDDVKEGEWREVDA
KGVPVLIEHYKAGVLSGARENTGAPGAAQ
>Mature_429_residues
MKWLRAIALMAGLARSTTGAAEFYEDKPLAHPLIQGLQESSMTLAFIKETNGVKGYYCRCDTPGERPQLLDEFGQVNIES
VFLMSLDSEDPTRFVLFRQNDRYKIYAYKYNANDHLYSRVTRLQPALDRIAEGRKHLDALTIKKALSQITPLNYSLFLEE
SGIPEFDQLDFSQGKLVSFYGQYYDPLSDPTPDDEPYFFKKTYQEKNGRFLTVTFWRWLDQTLVEGKRTLYNYRVRRIAW
ETEPTKFTGSEDGQSVSYDSGSLSAQGAYKQGVRVGPWSSSKDEKYSESGNFVEGKREGQWTLYQDGQTLEGEFHNDLRE
GRWQLLNHDDMEWVATGFQTYVHGQLNGLSELTVRGTTERGEYRDDKRQGLWVTRLDNGHTLNVNFVDDVKEGEWREVDA
KGVPVLIEHYKAGVLSGARENTGAPGAAQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 49110; Mature: 49110

Theoretical pI: Translated: 5.15; Mature: 5.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKWLRAIALMAGLARSTTGAAEFYEDKPLAHPLIQGLQESSMTLAFIKETNGVKGYYCRC
CHHHHHHHHHHHHHHCCCCCHHHHCCCCCHHHHHHHHHHCCEEEEEEEECCCCCEEEEEC
DTPGERPQLLDEFGQVNIESVFLMSLDSEDPTRFVLFRQNDRYKIYAYKYNANDHLYSRV
CCCCCCHHHHHHHCCCCEEEEEEEEECCCCCEEEEEEEECCCEEEEEEEECCCCHHHHHH
TRLQPALDRIAEGRKHLDALTIKKALSQITPLNYSLFLEESGIPEFDQLDFSQGKLVSFY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHCCCCCCCEEEEH
GQYYDPLSDPTPDDEPYFFKKTYQEKNGRFLTVTFWRWLDQTLVEGKRTLYNYRVRRIAW
HHHCCCCCCCCCCCCCCHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHHEEEEEEEE
ETEPTKFTGSEDGQSVSYDSGSLSAQGAYKQGVRVGPWSSSKDEKYSESGNFVEGKREGQ
CCCCCEECCCCCCCEEECCCCCCCCCCHHHCCCEECCCCCCCCCCCCCCCCEECCCCCCC
WTLYQDGQTLEGEFHNDLREGRWQLLNHDDMEWVATGFQTYVHGQLNGLSELTVRGTTER
EEEEECCCEECCHHHHHHHHHHHHHCCCCCHHHHHHHHHHEEECCCCCCEEEEEECCCCC
GEYRDDKRQGLWVTRLDNGHTLNVNFVDDVKEGEWREVDAKGVPVLIEHYKAGVLSGARE
CCCCCCCCCCEEEEEECCCCEEEEEECCCCCCCCCEEECCCCCCEEEHHHHHHHHCCCCC
NTGAPGAAQ
CCCCCCCCC
>Mature Secondary Structure
MKWLRAIALMAGLARSTTGAAEFYEDKPLAHPLIQGLQESSMTLAFIKETNGVKGYYCRC
CHHHHHHHHHHHHHHCCCCCHHHHCCCCCHHHHHHHHHHCCEEEEEEEECCCCCEEEEEC
DTPGERPQLLDEFGQVNIESVFLMSLDSEDPTRFVLFRQNDRYKIYAYKYNANDHLYSRV
CCCCCCHHHHHHHCCCCEEEEEEEEECCCCCEEEEEEEECCCEEEEEEEECCCCHHHHHH
TRLQPALDRIAEGRKHLDALTIKKALSQITPLNYSLFLEESGIPEFDQLDFSQGKLVSFY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHCCCCCCCEEEEH
GQYYDPLSDPTPDDEPYFFKKTYQEKNGRFLTVTFWRWLDQTLVEGKRTLYNYRVRRIAW
HHHCCCCCCCCCCCCCCHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHHEEEEEEEE
ETEPTKFTGSEDGQSVSYDSGSLSAQGAYKQGVRVGPWSSSKDEKYSESGNFVEGKREGQ
CCCCCEECCCCCCCEEECCCCCCCCCCHHHCCCEECCCCCCCCCCCCCCCCEECCCCCCC
WTLYQDGQTLEGEFHNDLREGRWQLLNHDDMEWVATGFQTYVHGQLNGLSELTVRGTTER
EEEEECCCEECCHHHHHHHHHHHHHCCCCCHHHHHHHHHHEEECCCCCCEEEEEECCCCC
GEYRDDKRQGLWVTRLDNGHTLNVNFVDDVKEGEWREVDAKGVPVLIEHYKAGVLSGARE
CCCCCCCCCCEEEEEECCCCEEEEEECCCCCCCCCEEECCCCCCEEEHHHHHHHHCCCCC
NTGAPGAAQ
CCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA