Definition Pseudomonas fluorescens Pf0-1 chromosome, complete genome.
Accession NC_007492
Length 6,438,405

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The map label for this gene is 77456505

Identifier: 77456505

GI number: 77456505

Start: 323742

End: 324173

Strand: Direct

Name: 77456505

Synonym: Pfl01_0277

Alternate gene names: NA

Gene position: 323742-324173 (Clockwise)

Preceding gene: 77456504

Following gene: 77456510

Centisome position: 5.03

GC content: 59.03

Gene sequence:

>432_bases
ATGTCCAACCCGATGCCGCAACGCAGCGATTACCCGCACTTCCAGCCGATCACCACGCGCTGGCACGACAACGACGCCTA
CGGCCACGTCAACAACGTCACCTATTACAGCTTCTTCGACACGGCGGTGAACACCTACCTGATCCAGGTTGGAGGGTTGG
ATATTCATGACGGCGAGGTGGTGGGGTTTGTGGTGAGTTCGTCTTGCGACTACTTCGCGTCGATTGCTTTCCCGGATCGA
ATCGAGATCGGTCTGCGGGTCGGTAAGCTGGGCAACAGTTCGGTGCAATACGAACTGGCGGTGTTCAAGGAAGGAGAACA
GGAAGCCTGTGCCGCCGGGCGCTTCGTGCATGTATTCGTCGACCGGGCATCCAATCAGCCGGTGTCGATTCCGGCCCGAT
TGCGCGAAGCGCTGGAACGCCTGACGGTGTGA

Upstream 100 bases:

>100_bases
GGCGATCACTGGCGGCCGGCGCCATTGATCGGCGAGCTGGCGGCGCGAGGCAAGGGTTTTTACCTTTAGACTGAGCAGAT
CACTCCAGGAATAGACACTG

Downstream 100 bases:

>100_bases
CGGGCAAAAAAAATCGCAGCCCGGGGGAGCTGCGATCTGGGGGTATCAGCTAACGAGGCCAGGCCTCAGTCGCGATAGTA
GCGGTGGTGCTTGCGATGGC

Product: thioesterase superfamily protein

Products: NA

Alternate protein names: Thioesterase; Thioesterase Family Protein; Thioesterase Superfamily; Thioesterase/Thiol Ester Dehydrase-Isomerase; Thioesterase Family Protein Domain Protein; 4-Hydroxybenzoyl-CoA Thioesterase; Acyl-CoA Thioesterase; GCN5-Related N-Acetyltransferase; Thioesterase Protein; Acyl-CoA Hydrolase/Thioesterase; Acyl-CoA Hydrolase

Number of amino acids: Translated: 143; Mature: 142

Protein sequence:

>143_residues
MSNPMPQRSDYPHFQPITTRWHDNDAYGHVNNVTYYSFFDTAVNTYLIQVGGLDIHDGEVVGFVVSSSCDYFASIAFPDR
IEIGLRVGKLGNSSVQYELAVFKEGEQEACAAGRFVHVFVDRASNQPVSIPARLREALERLTV

Sequences:

>Translated_143_residues
MSNPMPQRSDYPHFQPITTRWHDNDAYGHVNNVTYYSFFDTAVNTYLIQVGGLDIHDGEVVGFVVSSSCDYFASIAFPDR
IEIGLRVGKLGNSSVQYELAVFKEGEQEACAAGRFVHVFVDRASNQPVSIPARLREALERLTV
>Mature_142_residues
SNPMPQRSDYPHFQPITTRWHDNDAYGHVNNVTYYSFFDTAVNTYLIQVGGLDIHDGEVVGFVVSSSCDYFASIAFPDRI
EIGLRVGKLGNSSVQYELAVFKEGEQEACAAGRFVHVFVDRASNQPVSIPARLREALERLTV

Specific function: Unknown

COG id: COG0824

COG function: function code R; Predicted thioesterase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16004; Mature: 15873

Theoretical pI: Translated: 5.13; Mature: 5.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNPMPQRSDYPHFQPITTRWHDNDAYGHVNNVTYYSFFDTAVNTYLIQVGGLDIHDGEV
CCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCEEEEEEHHHHHEEEEEEECCEEECCCCE
VGFVVSSSCDYFASIAFPDRIEIGLRVGKLGNSSVQYELAVFKEGEQEACAAGRFVHVFV
EEEEEECCCCEEEEECCCCEEEEEEEECCCCCCCEEEEEEEEECCCHHHHHCCCEEEEEE
DRASNQPVSIPARLREALERLTV
ECCCCCCEECHHHHHHHHHHHCC
>Mature Secondary Structure 
SNPMPQRSDYPHFQPITTRWHDNDAYGHVNNVTYYSFFDTAVNTYLIQVGGLDIHDGEV
CCCCCCCCCCCCCCCCEEEECCCCCCCCCCCEEEEEEHHHHHEEEEEEECCEEECCCCE
VGFVVSSSCDYFASIAFPDRIEIGLRVGKLGNSSVQYELAVFKEGEQEACAAGRFVHVFV
EEEEEECCCCEEEEECCCCEEEEEEEECCCCCCCEEEEEEEEECCCHHHHHCCCEEEEEE
DRASNQPVSIPARLREALERLTV
ECCCCCCEECHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA