Definition Pseudomonas fluorescens Pf0-1 chromosome, complete genome.
Accession NC_007492
Length 6,438,405

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The map label for this gene is 77456257

Identifier: 77456257

GI number: 77456257

Start: 31846

End: 32172

Strand: Direct

Name: 77456257

Synonym: Pfl01_0029

Alternate gene names: NA

Gene position: 31846-32172 (Clockwise)

Preceding gene: 77456255

Following gene: 77456259

Centisome position: 0.49

GC content: 62.08

Gene sequence:

>327_bases
ATGCAGACGATCAAGGGTTATCACGCCCACGTTTATTACGACGCCAGCACGATCAAACAGGCGCGGGCACTTTGTGAGCA
GGCAGCAGCGCTGTTTCCATTGAAGATGGGCCGCGTGCACGAACGCCCGGTGGGCCCGCACCCGGACTGGAGCTGCCAGC
TGGCCTTCGGCCCGGAGCTGATCGGCGACGTGCTGCCGTGGCTGGCGCTCAATCGCAAAGGGTTGGTGGTGTTCCTGCAC
CCGGACACCGGCGATGACTTGCTCGATCACACCGAACACGCGATCTGGATGGGCGCGATGCGGCCGCTGGATCTGTCTGT
TTTTTAA

Upstream 100 bases:

>100_bases
TTTCGGCATTTTTCATGGCTGAGTTCCCTTTTGTTTTCCCTTGTATGGCGTGTGACATACGGTCAACGGCGAGGGTTCGA
ACCGATTCAGAGGGTTTGCG

Downstream 100 bases:

>100_bases
TCAGATGGTTTCTTCGGGTTCGCCCGGCAAATGCTCGTCCAGATGCAGCCACGGTAACTGGCTGTCGGTCCAGATATGCC
GCTCGGCGGCGGCCTGCTCT

Product: hypothetical protein

Products: NA

Alternate protein names: Dopa 4 5-Dioxygenase Family Protein; Aromatic Ring-Cleaving Dioxygenase; Aromatic Ring-Cleaving Dioxygenase-Like Protein; Dioxygenase; Dopa 4 5-Dioxygenase Family; Aromatic Ring-Cleaving Dioxygenase-Like; DOPA-Dioxygenase-Like Protein; DOPA 4 5-Dioxygenase-Related Protein; DOPA 4 5-Dioxygenase

Number of amino acids: Translated: 108; Mature: 108

Protein sequence:

>108_residues
MQTIKGYHAHVYYDASTIKQARALCEQAAALFPLKMGRVHERPVGPHPDWSCQLAFGPELIGDVLPWLALNRKGLVVFLH
PDTGDDLLDHTEHAIWMGAMRPLDLSVF

Sequences:

>Translated_108_residues
MQTIKGYHAHVYYDASTIKQARALCEQAAALFPLKMGRVHERPVGPHPDWSCQLAFGPELIGDVLPWLALNRKGLVVFLH
PDTGDDLLDHTEHAIWMGAMRPLDLSVF
>Mature_108_residues
MQTIKGYHAHVYYDASTIKQARALCEQAAALFPLKMGRVHERPVGPHPDWSCQLAFGPELIGDVLPWLALNRKGLVVFLH
PDTGDDLLDHTEHAIWMGAMRPLDLSVF

Specific function: Unknown

COG id: COG3805

COG function: function code Q; Aromatic ring-cleaving dioxygenase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12115; Mature: 12115

Theoretical pI: Translated: 6.62; Mature: 6.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQTIKGYHAHVYYDASTIKQARALCEQAAALFPLKMGRVHERPVGPHPDWSCQLAFGPEL
CCCCCCEEEEEEECHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEECHHH
IGDVLPWLALNRKGLVVFLHPDTGDDLLDHTEHAIWMGAMRPLDLSVF
HHHHHHHHHCCCCCEEEEECCCCCCHHHHHCCCEEEECCCCCCEEECC
>Mature Secondary Structure
MQTIKGYHAHVYYDASTIKQARALCEQAAALFPLKMGRVHERPVGPHPDWSCQLAFGPEL
CCCCCCEEEEEEECHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEECHHH
IGDVLPWLALNRKGLVVFLHPDTGDDLLDHTEHAIWMGAMRPLDLSVF
HHHHHHHHHCCCCCEEEEECCCCCCHHHHHCCCEEEECCCCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA