| Definition | Anabaena variabilis ATCC 29413 chromosome, complete genome. |
|---|---|
| Accession | NC_007413 |
| Length | 6,365,727 |
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The map label for this gene is eda [H]
Identifier: 75908662
GI number: 75908662
Start: 3039241
End: 3039882
Strand: Direct
Name: eda [H]
Synonym: Ava_2448
Alternate gene names: 75908662
Gene position: 3039241-3039882 (Clockwise)
Preceding gene: 75908660
Following gene: 75908663
Centisome position: 47.74
GC content: 45.48
Gene sequence:
>642_bases ATGTCTACTCAAGATTGGTTATCACAGTTGCAAAAACAGCGAGCGATCGCAGTCATCCGCGCCCCGAAACTGGAATTAGG GTTGCAAATGGCTCTGGCTGTAGCTTCTGGGGGAATACAGCTCATTGAAATTACCTGGAATAGCGATCGCCCAGGGGAAT TAATCACCAAATTACGTGAGCAGTTACCGGAATGTATTATTGGTACTGGCACATTATTTAATTTGCAGCAACTAGAAGAA GCGATCGCCTGTGGGGCAGAATTTCTATTTACGCCTCATGTTGACTCAGTCATGATCAAAGCATCTGTCATCAAAAACAT ACCCATCATTCCCGGCGCACTCACCCCTACGGAAATTGTTAATGCTTGGGCTAATGGTGCAAGTTGTGTCAAAGTATTCC CCGTGCAAGCTTTAGGGGGGGCTGATTATATTAAAAGTCTGCAAGGGCCTTTAGGTCATATTCCCTTAATTCCCACCGGG GGGGTAACCCTGGAAAATGCCAAAAGACTAATCCAAGCAGGTGCGATCGCCGTTGGTTTAGGTGGAGAGTTATTTCCTCA GCAACTAGTGAAAGCGAAAAATTGGCAAGCGATCGCCCAATTAGCCAGGAACTTAACTCAAGAACTAAGCATTATAACCT AA
Upstream 100 bases:
>100_bases TATACCCTTCTCCAAACCCTTGATCTTTCGTTTTCATGCGTAAGTCCTATATATATGTCAGTCTGGTAATTGAGAATCGA ACGCTTCTGCCTCCGTTACA
Downstream 100 bases:
>100_bases AGCTTGGTAATAAGGATCAAAAATAAGTTTCACTCTCAAACAAAAAAGATGCCTTTCACCTATACCCCTACACCCTTAAA CCCCTACACCCTTAAATTTT
Product: keto-hydroxyglutarate-aldolase/keto-deoxy- phosphogluconate aldolase
Products: NA
Alternate protein names: 4-hydroxy-2-oxoglutarate aldolase; 2-keto-4-hydroxyglutarate aldolase; KHG-aldolase; 2-dehydro-3-deoxy-phosphogluconate aldolase; 2-keto-3-deoxy-6-phosphogluconate aldolase; KDPG-aldolase; Phospho-2-dehydro-3-deoxygluconate aldolase; Phospho-2-keto-3-deoxygluconate aldolase [H]
Number of amino acids: Translated: 213; Mature: 212
Protein sequence:
>213_residues MSTQDWLSQLQKQRAIAVIRAPKLELGLQMALAVASGGIQLIEITWNSDRPGELITKLREQLPECIIGTGTLFNLQQLEE AIACGAEFLFTPHVDSVMIKASVIKNIPIIPGALTPTEIVNAWANGASCVKVFPVQALGGADYIKSLQGPLGHIPLIPTG GVTLENAKRLIQAGAIAVGLGGELFPQQLVKAKNWQAIAQLARNLTQELSIIT
Sequences:
>Translated_213_residues MSTQDWLSQLQKQRAIAVIRAPKLELGLQMALAVASGGIQLIEITWNSDRPGELITKLREQLPECIIGTGTLFNLQQLEE AIACGAEFLFTPHVDSVMIKASVIKNIPIIPGALTPTEIVNAWANGASCVKVFPVQALGGADYIKSLQGPLGHIPLIPTG GVTLENAKRLIQAGAIAVGLGGELFPQQLVKAKNWQAIAQLARNLTQELSIIT >Mature_212_residues STQDWLSQLQKQRAIAVIRAPKLELGLQMALAVASGGIQLIEITWNSDRPGELITKLREQLPECIIGTGTLFNLQQLEEA IACGAEFLFTPHVDSVMIKASVIKNIPIIPGALTPTEIVNAWANGASCVKVFPVQALGGADYIKSLQGPLGHIPLIPTGG VTLENAKRLIQAGAIAVGLGGELFPQQLVKAKNWQAIAQLARNLTQELSIIT
Specific function: KEY ENZYME IN THE ENTNER-DOUDOROFF PATHWAY. PARTICIPATES IN THE REGULATION OF THE INTRACELLULAR LEVEL OF GLYOXYLATE. [C]
COG id: COG0800
COG function: function code G; 2-keto-3-deoxy-6-phosphogluconate aldolase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the KHG/KDPG aldolase family [H]
Homologues:
Organism=Escherichia coli, GI1788156, Length=184, Percent_Identity=30.4347826086957, Blast_Score=105, Evalue=2e-24, Organism=Escherichia coli, GI48994954, Length=172, Percent_Identity=31.9767441860465, Blast_Score=79, Evalue=2e-16,
Paralogues:
None
Copy number: 2,000 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000887 - InterPro: IPR013785 [H]
Pfam domain/function: PF01081 Aldolase [H]
EC number: =4.1.3.16; =4.1.2.14 [H]
Molecular weight: Translated: 22759; Mature: 22628
Theoretical pI: Translated: 7.35; Mature: 7.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTQDWLSQLQKQRAIAVIRAPKLELGLQMALAVASGGIQLIEITWNSDRPGELITKLRE CCCHHHHHHHHHHHHHHEEECCCHHHHHHHHHHHHCCCEEEEEEEECCCCCHHHHHHHHH QLPECIIGTGTLFNLQQLEEAIACGAEFLFTPHVDSVMIKASVIKNIPIIPGALTPTEIV HHHHHEECCCCCHHHHHHHHHHHCCHHHEECCCHHHHHHHHHHHHCCCCCCCCCCHHHHH NAWANGASCVKVFPVQALGGADYIKSLQGPLGHIPLIPTGGVTLENAKRLIQAGAIAVGL HHHCCCCCEEEEEEHHHCCCHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHCCEEEEC GGELFPQQLVKAKNWQAIAQLARNLTQELSIIT CCHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure STQDWLSQLQKQRAIAVIRAPKLELGLQMALAVASGGIQLIEITWNSDRPGELITKLRE CCHHHHHHHHHHHHHHEEECCCHHHHHHHHHHHHCCCEEEEEEEECCCCCHHHHHHHHH QLPECIIGTGTLFNLQQLEEAIACGAEFLFTPHVDSVMIKASVIKNIPIIPGALTPTEIV HHHHHEECCCCCHHHHHHHHHHHCCHHHEECCCHHHHHHHHHHHHCCCCCCCCCCHHHHH NAWANGASCVKVFPVQALGGADYIKSLQGPLGHIPLIPTGGVTLENAKRLIQAGAIAVGL HHHCCCCCEEEEEEHHHCCCHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHCCEEEEC GGELFPQQLVKAKNWQAIAQLARNLTQELSIIT CCHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8145647 [H]