| Definition | Anabaena variabilis ATCC 29413 chromosome, complete genome. |
|---|---|
| Accession | NC_007413 |
| Length | 6,365,727 |
Click here to switch to the map view.
The map label for this gene is 75908663
Identifier: 75908663
GI number: 75908663
Start: 3040080
End: 3040592
Strand: Direct
Name: 75908663
Synonym: Ava_2449
Alternate gene names: NA
Gene position: 3040080-3040592 (Clockwise)
Preceding gene: 75908662
Following gene: 75908665
Centisome position: 47.76
GC content: 40.35
Gene sequence:
>513_bases ATGAAATCACTGATTTATCTCGACTGGAAACGTGGTTTAAAAATGTTCGTTGCTAGTGCAACATTATCCTTGAGTATGGT GAGTACCGGCTCTGGTGAAGCATTAGCAATTTCCACCCCACAAAAAATTGAAAATACTATCGAGACTTTACAAAAATCCG ATCAACGTTGGATTCAAATTAATCTTGCCAATCAAAGATTAACCGCTTGGGAAGGTGGAAAACCTGTATATGCGATCGTC ATTTCCTCTGGTAAAAGATCGACACCCACCCGCATAGGTTCTTTTAAGATTCAATCAAAGCATAAATCTACGCGGATGCG TGGTAGAAACTATGATGTTCCCAACGTTCCCTACGCCATGTTTTATAGCGGTAATTACGGAATTCACGGTGCATATTGGC ATAAAAAATTTGGTACACCCGTAAGTAATGGCTGTGTAAACCTCGCCCCCAATCATGCTAAATGGCTATTCAATTGGGCA TCTTTAGGAACACCAGTTGTCATTCAAAAGTAG
Upstream 100 bases:
>100_bases TTTGAATTAGCGTAGTTTTCAGGATGAAATTATTGAAAAGCCACTGTTATAGTTGATTTCTCAAAATCGGCTTTAACTCC ATGATTGATGTGTTTCAACT
Downstream 100 bases:
>100_bases TGCATACAAACAAAAAATCGTTACGGGCTATAACCTGTAACGATTTTAAGTTTTCAACCTACTATATCTAACAAAAATGT TGTGTGCGATTAGTGAAGTT
Product: ErfK/YbiS/YcfS/YnhG protein
Products: NA
Alternate protein names: ErfK/YbiS/YcfS/YnhG Superfamily Protein; ErfK/YbiS/YcfS/YnhG Family; Secreted Protein; Erfk/Ybis/Ycfs/Ynhg Family Protein; ErfK/YbiS/YcfS/YnhG; Piccolo Protein
Number of amino acids: Translated: 170; Mature: 170
Protein sequence:
>170_residues MKSLIYLDWKRGLKMFVASATLSLSMVSTGSGEALAISTPQKIENTIETLQKSDQRWIQINLANQRLTAWEGGKPVYAIV ISSGKRSTPTRIGSFKIQSKHKSTRMRGRNYDVPNVPYAMFYSGNYGIHGAYWHKKFGTPVSNGCVNLAPNHAKWLFNWA SLGTPVVIQK
Sequences:
>Translated_170_residues MKSLIYLDWKRGLKMFVASATLSLSMVSTGSGEALAISTPQKIENTIETLQKSDQRWIQINLANQRLTAWEGGKPVYAIV ISSGKRSTPTRIGSFKIQSKHKSTRMRGRNYDVPNVPYAMFYSGNYGIHGAYWHKKFGTPVSNGCVNLAPNHAKWLFNWA SLGTPVVIQK >Mature_170_residues MKSLIYLDWKRGLKMFVASATLSLSMVSTGSGEALAISTPQKIENTIETLQKSDQRWIQINLANQRLTAWEGGKPVYAIV ISSGKRSTPTRIGSFKIQSKHKSTRMRGRNYDVPNVPYAMFYSGNYGIHGAYWHKKFGTPVSNGCVNLAPNHAKWLFNWA SLGTPVVIQK
Specific function: Unknown
COG id: COG1376
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18993; Mature: 18993
Theoretical pI: Translated: 10.80; Mature: 10.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKSLIYLDWKRGLKMFVASATLSLSMVSTGSGEALAISTPQKIENTIETLQKSDQRWIQI CCCEEEEEHHHCCEEEEEHHEEEEEEEECCCCCEEEEECCHHHHHHHHHHHCCCCEEEEE NLANQRLTAWEGGKPVYAIVISSGKRSTPTRIGSFKIQSKHKSTRMRGRNYDVPNVPYAM EECCCEEEEECCCCEEEEEEECCCCCCCCCEECEEEEECCCCHHHHCCCCCCCCCCCEEE FYSGNYGIHGAYWHKKFGTPVSNGCVNLAPNHAKWLFNWASLGTPVVIQK EEECCCCCEEEEEHHHCCCCCCCCEEEECCCCCEEEEEHHHCCCEEEEEC >Mature Secondary Structure MKSLIYLDWKRGLKMFVASATLSLSMVSTGSGEALAISTPQKIENTIETLQKSDQRWIQI CCCEEEEEHHHCCEEEEEHHEEEEEEEECCCCCEEEEECCHHHHHHHHHHHCCCCEEEEE NLANQRLTAWEGGKPVYAIVISSGKRSTPTRIGSFKIQSKHKSTRMRGRNYDVPNVPYAM EECCCEEEEECCCCEEEEEEECCCCCCCCCEECEEEEECCCCHHHHCCCCCCCCCCCEEE FYSGNYGIHGAYWHKKFGTPVSNGCVNLAPNHAKWLFNWASLGTPVVIQK EEECCCCCEEEEEHHHCCCCCCCCEEEECCCCCEEEEEHHHCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA