Definition Anabaena variabilis ATCC 29413 chromosome, complete genome.
Accession NC_007413
Length 6,365,727

Click here to switch to the map view.

The map label for this gene is 75908663

Identifier: 75908663

GI number: 75908663

Start: 3040080

End: 3040592

Strand: Direct

Name: 75908663

Synonym: Ava_2449

Alternate gene names: NA

Gene position: 3040080-3040592 (Clockwise)

Preceding gene: 75908662

Following gene: 75908665

Centisome position: 47.76

GC content: 40.35

Gene sequence:

>513_bases
ATGAAATCACTGATTTATCTCGACTGGAAACGTGGTTTAAAAATGTTCGTTGCTAGTGCAACATTATCCTTGAGTATGGT
GAGTACCGGCTCTGGTGAAGCATTAGCAATTTCCACCCCACAAAAAATTGAAAATACTATCGAGACTTTACAAAAATCCG
ATCAACGTTGGATTCAAATTAATCTTGCCAATCAAAGATTAACCGCTTGGGAAGGTGGAAAACCTGTATATGCGATCGTC
ATTTCCTCTGGTAAAAGATCGACACCCACCCGCATAGGTTCTTTTAAGATTCAATCAAAGCATAAATCTACGCGGATGCG
TGGTAGAAACTATGATGTTCCCAACGTTCCCTACGCCATGTTTTATAGCGGTAATTACGGAATTCACGGTGCATATTGGC
ATAAAAAATTTGGTACACCCGTAAGTAATGGCTGTGTAAACCTCGCCCCCAATCATGCTAAATGGCTATTCAATTGGGCA
TCTTTAGGAACACCAGTTGTCATTCAAAAGTAG

Upstream 100 bases:

>100_bases
TTTGAATTAGCGTAGTTTTCAGGATGAAATTATTGAAAAGCCACTGTTATAGTTGATTTCTCAAAATCGGCTTTAACTCC
ATGATTGATGTGTTTCAACT

Downstream 100 bases:

>100_bases
TGCATACAAACAAAAAATCGTTACGGGCTATAACCTGTAACGATTTTAAGTTTTCAACCTACTATATCTAACAAAAATGT
TGTGTGCGATTAGTGAAGTT

Product: ErfK/YbiS/YcfS/YnhG protein

Products: NA

Alternate protein names: ErfK/YbiS/YcfS/YnhG Superfamily Protein; ErfK/YbiS/YcfS/YnhG Family; Secreted Protein; Erfk/Ybis/Ycfs/Ynhg Family Protein; ErfK/YbiS/YcfS/YnhG; Piccolo Protein

Number of amino acids: Translated: 170; Mature: 170

Protein sequence:

>170_residues
MKSLIYLDWKRGLKMFVASATLSLSMVSTGSGEALAISTPQKIENTIETLQKSDQRWIQINLANQRLTAWEGGKPVYAIV
ISSGKRSTPTRIGSFKIQSKHKSTRMRGRNYDVPNVPYAMFYSGNYGIHGAYWHKKFGTPVSNGCVNLAPNHAKWLFNWA
SLGTPVVIQK

Sequences:

>Translated_170_residues
MKSLIYLDWKRGLKMFVASATLSLSMVSTGSGEALAISTPQKIENTIETLQKSDQRWIQINLANQRLTAWEGGKPVYAIV
ISSGKRSTPTRIGSFKIQSKHKSTRMRGRNYDVPNVPYAMFYSGNYGIHGAYWHKKFGTPVSNGCVNLAPNHAKWLFNWA
SLGTPVVIQK
>Mature_170_residues
MKSLIYLDWKRGLKMFVASATLSLSMVSTGSGEALAISTPQKIENTIETLQKSDQRWIQINLANQRLTAWEGGKPVYAIV
ISSGKRSTPTRIGSFKIQSKHKSTRMRGRNYDVPNVPYAMFYSGNYGIHGAYWHKKFGTPVSNGCVNLAPNHAKWLFNWA
SLGTPVVIQK

Specific function: Unknown

COG id: COG1376

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18993; Mature: 18993

Theoretical pI: Translated: 10.80; Mature: 10.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSLIYLDWKRGLKMFVASATLSLSMVSTGSGEALAISTPQKIENTIETLQKSDQRWIQI
CCCEEEEEHHHCCEEEEEHHEEEEEEEECCCCCEEEEECCHHHHHHHHHHHCCCCEEEEE
NLANQRLTAWEGGKPVYAIVISSGKRSTPTRIGSFKIQSKHKSTRMRGRNYDVPNVPYAM
EECCCEEEEECCCCEEEEEEECCCCCCCCCEECEEEEECCCCHHHHCCCCCCCCCCCEEE
FYSGNYGIHGAYWHKKFGTPVSNGCVNLAPNHAKWLFNWASLGTPVVIQK
EEECCCCCEEEEEHHHCCCCCCCCEEEECCCCCEEEEEHHHCCCEEEEEC
>Mature Secondary Structure
MKSLIYLDWKRGLKMFVASATLSLSMVSTGSGEALAISTPQKIENTIETLQKSDQRWIQI
CCCEEEEEHHHCCEEEEEHHEEEEEEEECCCCCEEEEECCHHHHHHHHHHHCCCCEEEEE
NLANQRLTAWEGGKPVYAIVISSGKRSTPTRIGSFKIQSKHKSTRMRGRNYDVPNVPYAM
EECCCEEEEECCCCEEEEEEECCCCCCCCCEECEEEEECCCCHHHHCCCCCCCCCCCEEE
FYSGNYGIHGAYWHKKFGTPVSNGCVNLAPNHAKWLFNWASLGTPVVIQK
EEECCCCCEEEEEHHHCCCCCCCCEEEECCCCCEEEEEHHHCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA