| Definition | Nitrobacter winogradskyi Nb-255, complete genome. |
|---|---|
| Accession | NC_007406 |
| Length | 3,402,093 |
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The map label for this gene is murB
Identifier: 75675247
GI number: 75675247
Start: 1149463
End: 1150380
Strand: Direct
Name: murB
Synonym: Nwi_1054
Alternate gene names: 75675247
Gene position: 1149463-1150380 (Clockwise)
Preceding gene: 75675245
Following gene: 75675248
Centisome position: 33.79
GC content: 63.29
Gene sequence:
>918_bases ATGACCTTCCCCGACATCGTTCCGGAACTGAAATCGCGAATGCCGGACTTGCGCGGGCGGCTGCTGGCGAACGAGTCGCT GGCGCCGTTGACCTGGTTTCGCGTCGGTGGTCCGGCGCAGGCGTTGTTCACGCCGGCTGATGAGGATGACCTTGCTTATT TTCTGAGCCATCTGCCGGAGGAAATACCGGTCTGCTGCATCGGCGTGGGCTCCAACCTGATCGTGCGCGATCGCGGGCTG CCCGGCGTGGTGATTCGCCTGCCGCCACGCGGCTTCGGCGAGATCACGATCGATGGCGATGCCGTGCACGCCGGCGCCGC CGCGCTTGACAAGCGTGTCGCGGAAGCGGCCGCTGCTGCCAGCATCAGCGGGCTTGAATTCTACTTCGGCATTCCCGGCA CCATCGGCGGCGCGCTACGTATGAACGCAGGCGCCAACGGCAGCGAAACCAGGGATGTTCTCGTCGAAGCCCGCGCGCTC AGCCGCCGTGGCGAAAGGATGACCTTCGACAATTTCGCCATGGCGTTTGACTATCGCAGCAGCGGAATAGATCCCTCCGT CATCTTCACCGGCGCGATGTTTCGTGGCCGTATCGCCGAGCCGCAAGCGATCCGTGCGCGCATGAACGAGGTGCAGGCTC ATCGCGAGACGGTGCAGCCGATCCGCGAAAAGACCGGTGGCTCGACGTTCAAGAATCCGCCAGGTCAGAGCGCGTGGAAA CTGATCGATGCCGCCGGGATGCGCGGTCATCGCGTCGGCGGCGCGCAGGTGTCGGACATGCACTGCAATTTTCTCATCAA CACCGGAGAGGCAACCGCGCGCGACATCGAAACCCTGGGGGAGAGCGTACGCGAGCGGGTAAAACGGCATTCCGGTGTCG ATCTGCAATGGGAAATCAAACGGATCGGATTGGGATAG
Upstream 100 bases:
>100_bases TGCGTTCCACCGATCCGAAAGGCAACCTACACGTTCGTCATGGCCGGGCTTGTCCCGGCCATCCACGTCTTTTGAGTTAT TAAGTCGGTAGGTGGTTTCA
Downstream 100 bases:
>100_bases GGCTCATGCGCATCACCATTCTGTTCGGCGGCAGCAACAAGGAGCGTCTGGTTTCAGTCGCGAGCGCGCAGGCGCTCCAT CACGCATTGCCGGAGGCCGA
Product: UDP-N-acetylenolpyruvoylglucosamine reductase
Products: NA
Alternate protein names: UDP-N-acetylmuramate dehydrogenase
Number of amino acids: Translated: 305; Mature: 304
Protein sequence:
>305_residues MTFPDIVPELKSRMPDLRGRLLANESLAPLTWFRVGGPAQALFTPADEDDLAYFLSHLPEEIPVCCIGVGSNLIVRDRGL PGVVIRLPPRGFGEITIDGDAVHAGAAALDKRVAEAAAAASISGLEFYFGIPGTIGGALRMNAGANGSETRDVLVEARAL SRRGERMTFDNFAMAFDYRSSGIDPSVIFTGAMFRGRIAEPQAIRARMNEVQAHRETVQPIREKTGGSTFKNPPGQSAWK LIDAAGMRGHRVGGAQVSDMHCNFLINTGEATARDIETLGESVRERVKRHSGVDLQWEIKRIGLG
Sequences:
>Translated_305_residues MTFPDIVPELKSRMPDLRGRLLANESLAPLTWFRVGGPAQALFTPADEDDLAYFLSHLPEEIPVCCIGVGSNLIVRDRGL PGVVIRLPPRGFGEITIDGDAVHAGAAALDKRVAEAAAAASISGLEFYFGIPGTIGGALRMNAGANGSETRDVLVEARAL SRRGERMTFDNFAMAFDYRSSGIDPSVIFTGAMFRGRIAEPQAIRARMNEVQAHRETVQPIREKTGGSTFKNPPGQSAWK LIDAAGMRGHRVGGAQVSDMHCNFLINTGEATARDIETLGESVRERVKRHSGVDLQWEIKRIGLG >Mature_304_residues TFPDIVPELKSRMPDLRGRLLANESLAPLTWFRVGGPAQALFTPADEDDLAYFLSHLPEEIPVCCIGVGSNLIVRDRGLP GVVIRLPPRGFGEITIDGDAVHAGAAALDKRVAEAAAAASISGLEFYFGIPGTIGGALRMNAGANGSETRDVLVEARALS RRGERMTFDNFAMAFDYRSSGIDPSVIFTGAMFRGRIAEPQAIRARMNEVQAHRETVQPIREKTGGSTFKNPPGQSAWKL IDAAGMRGHRVGGAQVSDMHCNFLINTGEATARDIETLGESVRERVKRHSGVDLQWEIKRIGLG
Specific function: Cell wall formation
COG id: COG0812
COG function: function code M; UDP-N-acetylmuramate dehydrogenase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 FAD-binding PCMH-type domain
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): MURB_NITWN (Q3STS5)
Other databases:
- EMBL: CP000115 - RefSeq: YP_317668.1 - ProteinModelPortal: Q3STS5 - SMR: Q3STS5 - STRING: Q3STS5 - GeneID: 3677013 - GenomeReviews: CP000115_GR - KEGG: nwi:Nwi_1054 - NMPDR: fig|323098.3.peg.1756 - eggNOG: COG0812 - HOGENOM: HBG686573 - OMA: SKKHAGF - ProtClustDB: PRK13905 - BioCyc: NWIN323098:NWI_1054-MONOMER - GO: GO:0005737 - HAMAP: MF_00037 - InterPro: IPR016169 - InterPro: IPR016166 - InterPro: IPR016167 - InterPro: IPR003170 - InterPro: IPR011601 - InterPro: IPR006094 - Gene3D: G3DSA:3.30.465.10 - Gene3D: G3DSA:3.30.43.10 - Gene3D: G3DSA:3.90.78.10 - PANTHER: PTHR21071 - TIGRFAMs: TIGR00179
Pfam domain/function: PF01565 FAD_binding_4; PF02873 MurB_C; SSF56176 FAD-binding_2; SSF56194 MurB_C
EC number: =1.1.1.158
Molecular weight: Translated: 32966; Mature: 32835
Theoretical pI: Translated: 7.13; Mature: 7.13
Prosite motif: PS51387 FAD_PCMH
Important sites: ACT_SITE 179-179 ACT_SITE 228-228 ACT_SITE 298-298
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTFPDIVPELKSRMPDLRGRLLANESLAPLTWFRVGGPAQALFTPADEDDLAYFLSHLPE CCCHHHHHHHHHHCHHHHHHHHCCCCCCCEEEEECCCCCCEEECCCCCHHHHHHHHHCCH EIPVCCIGVGSNLIVRDRGLPGVVIRLPPRGFGEITIDGDAVHAGAAALDKRVAEAAAAA HCCEEEEECCCCEEEEECCCCEEEEECCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHH SISGLEFYFGIPGTIGGALRMNAGANGSETRDVLVEARALSRRGERMTFDNFAMAFDYRS HCCCEEEEEECCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHCCCCCEECCEEEEEECCC SGIDPSVIFTGAMFRGRIAEPQAIRARMNEVQAHRETVQPIREKTGGSTFKNPPGQSAWK CCCCHHEEEECHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHH LIDAAGMRGHRVGGAQVSDMHCNFLINTGEATARDIETLGESVRERVKRHSGVDLQWEIK HHHHCCCCCCCCCCCEEECEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEE RIGLG EECCC >Mature Secondary Structure TFPDIVPELKSRMPDLRGRLLANESLAPLTWFRVGGPAQALFTPADEDDLAYFLSHLPE CCHHHHHHHHHHCHHHHHHHHCCCCCCCEEEEECCCCCCEEECCCCCHHHHHHHHHCCH EIPVCCIGVGSNLIVRDRGLPGVVIRLPPRGFGEITIDGDAVHAGAAALDKRVAEAAAAA HCCEEEEECCCCEEEEECCCCEEEEECCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHH SISGLEFYFGIPGTIGGALRMNAGANGSETRDVLVEARALSRRGERMTFDNFAMAFDYRS HCCCEEEEEECCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHCCCCCEECCEEEEEECCC SGIDPSVIFTGAMFRGRIAEPQAIRARMNEVQAHRETVQPIREKTGGSTFKNPPGQSAWK CCCCHHEEEECHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHH LIDAAGMRGHRVGGAQVSDMHCNFLINTGEATARDIETLGESVRERVKRHSGVDLQWEIK HHHHCCCCCCCCCCCEEECEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEE RIGLG EECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA