Definition Thiobacillus denitrificans ATCC 25259 chromosome, complete genome.
Accession NC_007404
Length 2,909,809

Click here to switch to the map view.

The map label for this gene is 74318398

Identifier: 74318398

GI number: 74318398

Start: 2453816

End: 2454538

Strand: Reverse

Name: 74318398

Synonym: Tbd_2380

Alternate gene names: NA

Gene position: 2454538-2453816 (Counterclockwise)

Preceding gene: 74318399

Following gene: 74318397

Centisome position: 84.35

GC content: 66.25

Gene sequence:

>723_bases
ATGGCCGCCGCCGCGGCGATTCTGCTCGCGGCCTATTTCATCCGCGGCATCACCGGTTTCGGTTCGGGGTTGATCGCGGT
GCCGCTGCTGGCCTTGTTCATGCCGTTGCAGTTCGTCGTCCCCCTCGTGCTCCTGCTCGATTTCACGGCCTCGCTCGTGC
TCGGCGGGGTGCACTTCAAACGCGTGCGCTGGGACGAGATCGGTATCCTGATTCCGTTCAGCGTCGTCGGCGTCGCGTTC
GGAACGGGTCTGCTGGTGAACCTGCCGCAGGCCCCTATGCTGATCGGGCTGGCATTGTTCGTCCTCGTTTTTGGGCTGCG
CAGCCTGCTGAACCTGCACGGCGACAAGCCCGTGTCCCGGCTCTGGGCGATTCCGGCCTCGCTGACGGGCGGCACCGTCG
GCGGTCTTTTTGGTACGGGCGGCCCGCCCTATGTGATTTACCTGGCCCATCGCATCCGCGACAAGGGCGAGTCGCGTGCC
ACGCTATCGGCGTTGTTCTTCATCGAGGGCTTGACGCGCATCGGCAGCTTCCTGATAGTGGGGCTGCTGTTGACCCCGGC
GGTGTGGTCGGCCTATGCCGTCGCACTGCCGCTCGTGCTCGCCGCACTTTATCTCGGCGGACGCGCGCACGTGGGGCTTG
CGCCGGCGCAGATGACGCGCCTGGTCGGCCTCCTGCTCCTGGTGTCGAGCATCTCGCTGCTCGTCAAGGCAGCCGCCGCA
TGA

Upstream 100 bases:

>100_bases
CCTGGGTGAAGGTTTCGGTGACCAAGTTCGCGATTGTCCCCGGCATCAAGGAACTCGGTATCACGATCGAACGCGGCGCG
CGTCCTTGAGTTTCGAACAC

Downstream 100 bases:

>100_bases
ATGACGCGATGAACGATTCCGCAGCTTTGCACTTCCAGTCGATCGCCTTCACCGGCCTCGCGCCGGGGCCGCGGCTCATC
GTGCTCGGCGCCGTGCACGG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 240; Mature: 239

Protein sequence:

>240_residues
MAAAAAILLAAYFIRGITGFGSGLIAVPLLALFMPLQFVVPLVLLLDFTASLVLGGVHFKRVRWDEIGILIPFSVVGVAF
GTGLLVNLPQAPMLIGLALFVLVFGLRSLLNLHGDKPVSRLWAIPASLTGGTVGGLFGTGGPPYVIYLAHRIRDKGESRA
TLSALFFIEGLTRIGSFLIVGLLLTPAVWSAYAVALPLVLAALYLGGRAHVGLAPAQMTRLVGLLLLVSSISLLVKAAAA

Sequences:

>Translated_240_residues
MAAAAAILLAAYFIRGITGFGSGLIAVPLLALFMPLQFVVPLVLLLDFTASLVLGGVHFKRVRWDEIGILIPFSVVGVAF
GTGLLVNLPQAPMLIGLALFVLVFGLRSLLNLHGDKPVSRLWAIPASLTGGTVGGLFGTGGPPYVIYLAHRIRDKGESRA
TLSALFFIEGLTRIGSFLIVGLLLTPAVWSAYAVALPLVLAALYLGGRAHVGLAPAQMTRLVGLLLLVSSISLLVKAAAA
>Mature_239_residues
AAAAAILLAAYFIRGITGFGSGLIAVPLLALFMPLQFVVPLVLLLDFTASLVLGGVHFKRVRWDEIGILIPFSVVGVAFG
TGLLVNLPQAPMLIGLALFVLVFGLRSLLNLHGDKPVSRLWAIPASLTGGTVGGLFGTGGPPYVIYLAHRIRDKGESRAT
LSALFFIEGLTRIGSFLIVGLLLTPAVWSAYAVALPLVLAALYLGGRAHVGLAPAQMTRLVGLLLLVSSISLLVKAAAA

Specific function: Unknown

COG id: COG0730

COG function: function code R; Predicted permeases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25046; Mature: 24914

Theoretical pI: Translated: 10.95; Mature: 10.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAAAAAILLAAYFIRGITGFGSGLIAVPLLALFMPLQFVVPLVLLLDFTASLVLGGVHFK
CHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH
RVRWDEIGILIPFSVVGVAFGTGLLVNLPQAPMLIGLALFVLVFGLRSLLNLHGDKPVSR
HEEHHHCCEEHHHHHHHHHHHCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH
LWAIPASLTGGTVGGLFGTGGPPYVIYLAHRIRDKGESRATLSALFFIEGLTRIGSFLIV
HHHCCCCCCCCCCCCCCCCCCCCCEEHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH
GLLLTPAVWSAYAVALPLVLAALYLGGRAHVGLAPAQMTRLVGLLLLVSSISLLVKAAAA
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
AAAAAILLAAYFIRGITGFGSGLIAVPLLALFMPLQFVVPLVLLLDFTASLVLGGVHFK
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH
RVRWDEIGILIPFSVVGVAFGTGLLVNLPQAPMLIGLALFVLVFGLRSLLNLHGDKPVSR
HEEHHHCCEEHHHHHHHHHHHCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH
LWAIPASLTGGTVGGLFGTGGPPYVIYLAHRIRDKGESRATLSALFFIEGLTRIGSFLIV
HHHCCCCCCCCCCCCCCCCCCCCCEEHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH
GLLLTPAVWSAYAVALPLVLAALYLGGRAHVGLAPAQMTRLVGLLLLVSSISLLVKAAAA
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA