| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is 74318368
Identifier: 74318368
GI number: 74318368
Start: 2423985
End: 2424827
Strand: Reverse
Name: 74318368
Synonym: Tbd_2350
Alternate gene names: NA
Gene position: 2424827-2423985 (Counterclockwise)
Preceding gene: 74318369
Following gene: 74318367
Centisome position: 83.33
GC content: 67.26
Gene sequence:
>843_bases ATGCCGACATCCGAGCAGGCGGACGGTGCCGATACCATCGTGTATCGCCGCCATGCCTGGCCGATCCGCCTCATGCACTG GATCAACGTGGTCGCCTTTGCGGTGCTGCTCATGAGCGGGCTGCAGATCTTCAACGCGTTTCCGGCGCTTCACTGGGGCA AATCCTCCTACACCGGCGAGGCCCCGTTGCTGCGCATCGGCGCGCGTCTCGACGCCGACGGTAAGGCGGTCGGGGTGACG CGCATTTTCGGGCGCGATTTCGAGACGACCGGTGTGCTCGGGGTGTCGGCGGGCGCCGACGGGGCGCCGACGGTGCGCGG TTTTCCGGCATGGATCACGCTGCCGGGCGAGCAGTGGCTCGCGATGGCGCGGCGCTGGCATCTGTTCTTCGCCTGGGTGC TCGTCGTCAACGGCCTCCTGTATCTCGGCTACACGCTCGCCAGCGGGCACCTCGCGCGCGATCTCCTGCCGGATCGCGCC GACTGGCGCGGGTTCGGGCAGTCGCTCAAGGACCACCTGCTTTTCCGCCGCCCGGCGGGAGAGGCCGAGCGCCGTTACAA CGTGCTGCAAAAACTCGCCTACCTGGCCGTGATCTTCGTGCTGTTTCCGCTCGTGGTCGTGATGGGCCTGGCCATGTCGC CGGCGCTGAACGCGCTCCTGCCCGGTTGGGTCGACGTCGTGGGCGGACGCCAGTCGGCGCGTACCCTGCACTTCGTGCTG GCCTGGATGCTCGTGGCCTTCGTCTTCATCCACGTCTTCGAGCTCGTCGTCAGCGGCTTCTGGAACAAGCTGCGCGCCAT GGTGACCGGGCGTTATCGACTCGAAGGGGATCGCGATGCGTGA
Upstream 100 bases:
>100_bases CACGAGGCGAGCGCCTGAGCCGCCGCGGTCGCTTGGATTCCGCGCGCCGCCCGCCTATGCTGCACAGGCCAAAGGCGCAG CGAATTGCCGAGGGATTTCA
Downstream 100 bases:
>100_bases ATGCGAAAACGGCCGCCGGCGCTTCCTGCAGCGCGCGCTCGCCGCCGGAAGCGCGCTCGTGCTCGCCGGCTGCGAGCGCC TGTCGCGCAGCGAATGGTTC
Product: hypothetical protein
Products: NA
Alternate protein names: Transmembrane B-Type Cytochrome Protein; Thiosulfate Reductase Cytochrome B Subunit-Like Protein; HupC/HyaC/HydC Family Protein; Cytochrome B/B6 Domain Protein; Transmembrane Cytochrome B-Type Protein
Number of amino acids: Translated: 280; Mature: 279
Protein sequence:
>280_residues MPTSEQADGADTIVYRRHAWPIRLMHWINVVAFAVLLMSGLQIFNAFPALHWGKSSYTGEAPLLRIGARLDADGKAVGVT RIFGRDFETTGVLGVSAGADGAPTVRGFPAWITLPGEQWLAMARRWHLFFAWVLVVNGLLYLGYTLASGHLARDLLPDRA DWRGFGQSLKDHLLFRRPAGEAERRYNVLQKLAYLAVIFVLFPLVVVMGLAMSPALNALLPGWVDVVGGRQSARTLHFVL AWMLVAFVFIHVFELVVSGFWNKLRAMVTGRYRLEGDRDA
Sequences:
>Translated_280_residues MPTSEQADGADTIVYRRHAWPIRLMHWINVVAFAVLLMSGLQIFNAFPALHWGKSSYTGEAPLLRIGARLDADGKAVGVT RIFGRDFETTGVLGVSAGADGAPTVRGFPAWITLPGEQWLAMARRWHLFFAWVLVVNGLLYLGYTLASGHLARDLLPDRA DWRGFGQSLKDHLLFRRPAGEAERRYNVLQKLAYLAVIFVLFPLVVVMGLAMSPALNALLPGWVDVVGGRQSARTLHFVL AWMLVAFVFIHVFELVVSGFWNKLRAMVTGRYRLEGDRDA >Mature_279_residues PTSEQADGADTIVYRRHAWPIRLMHWINVVAFAVLLMSGLQIFNAFPALHWGKSSYTGEAPLLRIGARLDADGKAVGVTR IFGRDFETTGVLGVSAGADGAPTVRGFPAWITLPGEQWLAMARRWHLFFAWVLVVNGLLYLGYTLASGHLARDLLPDRAD WRGFGQSLKDHLLFRRPAGEAERRYNVLQKLAYLAVIFVLFPLVVVMGLAMSPALNALLPGWVDVVGGRQSARTLHFVLA WMLVAFVFIHVFELVVSGFWNKLRAMVTGRYRLEGDRDA
Specific function: Unknown
COG id: COG4117
COG function: function code C; Thiosulfate reductase cytochrome B subunit (membrane anchoring protein)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31202; Mature: 31071
Theoretical pI: Translated: 10.36; Mature: 10.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPTSEQADGADTIVYRRHAWPIRLMHWINVVAFAVLLMSGLQIFNAFPALHWGKSSYTGE CCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCC APLLRIGARLDADGKAVGVTRIFGRDFETTGVLGVSAGADGAPTVRGFPAWITLPGEQWL CCHHHCCCCCCCCCCEEEHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCEEEECCCHHHH AMARRWHLFFAWVLVVNGLLYLGYTLASGHLARDLLPDRADWRGFGQSLKDHLLFRRPAG HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCC EAERRYNVLQKLAYLAVIFVLFPLVVVMGLAMSPALNALLPGWVDVVGGRQSARTLHFVL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCHHHHHHHHHH AWMLVAFVFIHVFELVVSGFWNKLRAMVTGRYRLEGDRDA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCC >Mature Secondary Structure PTSEQADGADTIVYRRHAWPIRLMHWINVVAFAVLLMSGLQIFNAFPALHWGKSSYTGE CCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCC APLLRIGARLDADGKAVGVTRIFGRDFETTGVLGVSAGADGAPTVRGFPAWITLPGEQWL CCHHHCCCCCCCCCCEEEHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCEEEECCCHHHH AMARRWHLFFAWVLVVNGLLYLGYTLASGHLARDLLPDRADWRGFGQSLKDHLLFRRPAG HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCC EAERRYNVLQKLAYLAVIFVLFPLVVVMGLAMSPALNALLPGWVDVVGGRQSARTLHFVL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCHHHHHHHHHH AWMLVAFVFIHVFELVVSGFWNKLRAMVTGRYRLEGDRDA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA