Definition Thiobacillus denitrificans ATCC 25259 chromosome, complete genome.
Accession NC_007404
Length 2,909,809

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The map label for this gene is 74318135

Identifier: 74318135

GI number: 74318135

Start: 2205947

End: 2206453

Strand: Reverse

Name: 74318135

Synonym: Tbd_2117

Alternate gene names: NA

Gene position: 2206453-2205947 (Counterclockwise)

Preceding gene: 74318136

Following gene: 74318134

Centisome position: 75.83

GC content: 59.96

Gene sequence:

>507_bases
ATGCGCCAACTGTTTCTTGCTTTCGTCCTGCTACTGGCGGCGCCTGCCTGGGCCGAGACGCGCGATCCGGCGAGCCATTT
CTTCCAGGCCAAGTTCGGCGATTTCCAGGCCGAACTCGATGCTGCGCGGGAGCAGGGCAAGAAAGGCATCTTTCTGTTCT
TCGAGATGGACGAATGCCCATTCTGCGAGCGCATGAGAACGACGATCCTCAATCAGAGCGACGTGCAGGACGCCTACCGC
GCGCAATTTCTCGTCTATTCGATCGACGTGAACGGCGACACGTCGATGACCGACTTCAAGGGCAAGGCGACGACCGAAAA
GGATTTCGCGTTCGCGCACCGCGTGCGCGCGACGCCGACCCTGCTGTTCTTCGACCTCGATGGCAAACTTATCGCCCGTC
ACACGGGGCCGACCAAGGATAAAGCCGAGTTCCTGTTGCTCGCGCGTTACGTCGTCGACGGGGCCTACGCGAACCAGCCG
TTCACTCGCTACAAACAGGGCAAATGA

Upstream 100 bases:

>100_bases
AAAATGGTCGCGCAGCAGGTCGGTGCCGTCACGCGCGAAGCGGTGGAAAGCTATCTCAAGGGCAAAGGGGCCCGGCCCGC
AAAATAATCGGGAGATGTCC

Downstream 100 bases:

>100_bases
AGCGCGCGGCCTGGGTCGCGTTGTTGAGCGTCCTGCCGCTGACGGCGGTCGCTGAACCGCTGACGCTCGAGGCCGCGCTC
GCTGCCGCCGCGGCACCGCA

Product: hypothetical protein

Products: NA

Alternate protein names: Thioredoxin-Like Protein; Thioredoxin SoxW Protein

Number of amino acids: Translated: 168; Mature: 168

Protein sequence:

>168_residues
MRQLFLAFVLLLAAPAWAETRDPASHFFQAKFGDFQAELDAAREQGKKGIFLFFEMDECPFCERMRTTILNQSDVQDAYR
AQFLVYSIDVNGDTSMTDFKGKATTEKDFAFAHRVRATPTLLFFDLDGKLIARHTGPTKDKAEFLLLARYVVDGAYANQP
FTRYKQGK

Sequences:

>Translated_168_residues
MRQLFLAFVLLLAAPAWAETRDPASHFFQAKFGDFQAELDAAREQGKKGIFLFFEMDECPFCERMRTTILNQSDVQDAYR
AQFLVYSIDVNGDTSMTDFKGKATTEKDFAFAHRVRATPTLLFFDLDGKLIARHTGPTKDKAEFLLLARYVVDGAYANQP
FTRYKQGK
>Mature_168_residues
MRQLFLAFVLLLAAPAWAETRDPASHFFQAKFGDFQAELDAAREQGKKGIFLFFEMDECPFCERMRTTILNQSDVQDAYR
AQFLVYSIDVNGDTSMTDFKGKATTEKDFAFAHRVRATPTLLFFDLDGKLIARHTGPTKDKAEFLLLARYVVDGAYANQP
FTRYKQGK

Specific function: Unknown

COG id: COG2143

COG function: function code O; Thioredoxin-related protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19187; Mature: 19187

Theoretical pI: Translated: 7.50; Mature: 7.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRQLFLAFVLLLAAPAWAETRDPASHFFQAKFGDFQAELDAAREQGKKGIFLFFEMDECP
CHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHCCCCCEEEEEECCCCC
FCERMRTTILNQSDVQDAYRAQFLVYSIDVNGDTSMTDFKGKATTEKDFAFAHRVRATPT
HHHHHHHHHCCCHHHHHHHHEEEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHCCCCE
LLFFDLDGKLIARHTGPTKDKAEFLLLARYVVDGAYANQPFTRYKQGK
EEEEECCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MRQLFLAFVLLLAAPAWAETRDPASHFFQAKFGDFQAELDAAREQGKKGIFLFFEMDECP
CHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHCCCCCEEEEEECCCCC
FCERMRTTILNQSDVQDAYRAQFLVYSIDVNGDTSMTDFKGKATTEKDFAFAHRVRATPT
HHHHHHHHHCCCHHHHHHHHEEEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHCCCCE
LLFFDLDGKLIARHTGPTKDKAEFLLLARYVVDGAYANQPFTRYKQGK
EEEEECCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA