Definition Thiobacillus denitrificans ATCC 25259 chromosome, complete genome.
Accession NC_007404
Length 2,909,809

Click here to switch to the map view.

The map label for this gene is 74318030

Identifier: 74318030

GI number: 74318030

Start: 2101036

End: 2103177

Strand: Direct

Name: 74318030

Synonym: Tbd_2012

Alternate gene names: NA

Gene position: 2101036-2103177 (Clockwise)

Preceding gene: 74318029

Following gene: 74318031

Centisome position: 72.21

GC content: 64.99

Gene sequence:

>2142_bases
ATGACTACGCACGACGCCGTTAGGGGGCTGGTCGCGCAGCCCCGTGCGCGCAACAAGCGCTTCAACAAACTGTGTGCTGG
GACAGTGCTTGCCTCGGCAAGCCTGATTTCGGCGGCCGCCCTGGCAAGCAGCGCGCCGGCGCCCCGCGGCGGTTCGGGCG
AAGTCACCCTGATCCACACCGGCGACATCCATGGCCATCTCGTGCCGCGGCCCAATTTGCGCAGTGACGCTCTCGGCTAC
CGAGGCGTCAGCATGGAAGGCGGCGTAGCGCGCATGTATACCGTCATCAAGGCACTGCGGGCCCTGGCGACAAAGGACGG
GGTCGACCGTTCGCTTCTGATCAACACCGGGGATACCCTGCAAGGCTCGGGCGAGGCGCTGTTCAGCCGGGGCCAGGCCA
TGATCGATGTGCTGAATGCGTTCGGCTTTGTGGCCCACGCGCCCGGCAACTGGGACTTCCTGTACGGCACGGGCCGCTTC
GAGGAAACCTTCAAGGGTTCCGCGACCGCGCCGCCGCTGGCGAACTGGAACGCGCTCGCGTCCAACCTCTATTACGCCAA
CCAGTTCGACGACACCGCCCTATGCGGCGCGAAGGCCACGGATCCCGCGACCGGTGTGCCGCGCCCGCTCAGACGCGTCC
TGCCGACACACAGCATCAGGCAGGTCGGCAAGGTGAAGGTCGGCATCCTCGGCATGACGACGGCGCGGGCGATCGCGGCC
GTCGGGACAAGCGTCACGCAGAACTACCTGTTCACCGACGCCAAGGCCGAAGTGCCCTGCCTGGTCGATAAGCTGCGTAC
GGTCGACAAGGTGGACGTGGTCGTGATGATTTCCGAACTCGAGATGGCGCGCGACATCGAGATCGCCGAGACCCTCGCTC
CCAGCCCTGATGTGATCCTGAATTCGGACATGCACGAACGCACCACCGCGCCGATCGTCGTCGACCACGCCGACGGCCGC
AACACCTTGATCGTGGAGGAGGGTCAGGACGGCACCGCGGTTGGAAACCTCAAGCTTCGGGTCAAGAACGGCAGAGTCGC
GGACTGGAGCTTCAAACAGATCATCGTGGCGGAGGGAATCCCGGAGGACAAGACCATTGCCGCCAAGGTCGCCAAGGCGC
GCGCGCCCTTCGTGGCGGGAAGCTTCGTGCCGGGCCAGAAAGTCACGGTGGGCGGCAACACCACTGAACTCCTGCGTCCC
GTGGACGAGACCATCGCCTTCACCGAAGTCGACCTGCACCGCTCAAATTTCGTCGATGAGGACATGCCGGGGGTGGTCGA
AGGCTCCTCCCATAACCTGATCGCGGATGCCATGGCCGCCGTATCCGGGGCCGAAAGCGCCTCGGTCCGGGGTTTCCGCT
ACGGCACCCACGTTCCCGCAGGCTGGCCCATCACCATGGAGGACATCTACCATTACGTGCCCATCGCGGCCAAGCTGGGG
CGAACCACCAAGGCATGCGGCGCCGACCTCAAGTTCGCTATCGAGCAGTCCACTCAAGGTACCTTCGCCTCAGATCCCAG
CCTGTGGGCGGGAGGCTGGATGTTCGGCTACAACGGCGTGAGCTTTGACCTCGACGCCTGCGACGGACTCCTGGGTACGA
CGCCAGCGCCGATCAACGGACCGACCCTCGCGTTCCCGACCCGGCCCTGGGGCACCAACCGCGGCAGCAACATCAAGGTG
AATGGCCTGCCGCTCAAGGAGATGGACATCTACGACGGCCGCGCGACCATAGACGGTGCGCCCAACCCGACTTACCAGCA
ATGTCTGAGCGCAGAGGGTGGTCCGGCCTACGAAGGCTACCGGGTTGCCGGCTACTGGTATGCCGACGACAAAACCACGA
TCAACAACTGTAACCCCTGCCGCGGCCGCCAGGTCCAGGTCGTCAAGACCGACGGGTCGATCGTCCAGGTCGCAGGCCCG
GGCGCATCCGCCACGCTGCCGCCGAGCGAGCAGCTCATGGACATCACCGAAGCCGTCGTCAAGTATCTGCGTGAAAACCT
CGGGGGAACGGTGACTGCGGCCAACCTGCCGAGCCACCGCCTCACCGTGAAGCGGCTGCCGACGATCAGCCCAGCTGGCT
ACAACTTCAAGATGATCCAACCGTTGAAGGGCGCCTCAACGGCAACCTGCCCGACGCTGTAA

Upstream 100 bases:

>100_bases
TACCACGCCTGCGGCATAAACGGAATAAACGGGATTTGAGCCCCGTCCTTACGATGTGAGCCCTGTGCCTAGGGTTCGAC
ATCCGAGGGAGGAGAACCCG

Downstream 100 bases:

>100_bases
AAAAGCGTTGCCTCGCACGCCGAATCCGGCCCGGCGCAAGCCGGGATTTTCTTTTGATGTGCAACCGGCGTCAACGCGAG
GCGTCAATCGTCTGTCATAC

Product: putative esterase

Products: NA

Alternate protein names: Sulfate Thiol Esterase SoxB; 5-Nucleotidase Domain-Containing Protein; 5-Nucleotidase; Sulfur Oxidation B Protein; Sulfur Oxidation Protein SoxB; Twin-Arginine Translocation Pathway Signal; 5-Nucleotidase/2' 3'-Cyclic Phosphodiesterase; Ser/Thr Protein Phosphatase Family Protein; Periplasmic 5-Nucleotidase; 5`-Nucleotidase Family Protein; Esterase; Sulfur Oxidation Protein; 5-Nucleotidase C- Domain Protein; Sulfur Oxidation Protein Sulfate Thiol Esterase; Mn-Dependent Hydrolase; 5-Nucleotidase Soxb Homolog; 5-Nucleotidase-Like Protein; Sulfate Thiol Esterase; 5-Nucleotidase-Like; Nucleotidase; Sulfate Thiol Esterase Soxb; Metallophosphoesterase; Protein UshA (Two S-Layer Domains

Number of amino acids: Translated: 713; Mature: 712

Protein sequence:

>713_residues
MTTHDAVRGLVAQPRARNKRFNKLCAGTVLASASLISAAALASSAPAPRGGSGEVTLIHTGDIHGHLVPRPNLRSDALGY
RGVSMEGGVARMYTVIKALRALATKDGVDRSLLINTGDTLQGSGEALFSRGQAMIDVLNAFGFVAHAPGNWDFLYGTGRF
EETFKGSATAPPLANWNALASNLYYANQFDDTALCGAKATDPATGVPRPLRRVLPTHSIRQVGKVKVGILGMTTARAIAA
VGTSVTQNYLFTDAKAEVPCLVDKLRTVDKVDVVVMISELEMARDIEIAETLAPSPDVILNSDMHERTTAPIVVDHADGR
NTLIVEEGQDGTAVGNLKLRVKNGRVADWSFKQIIVAEGIPEDKTIAAKVAKARAPFVAGSFVPGQKVTVGGNTTELLRP
VDETIAFTEVDLHRSNFVDEDMPGVVEGSSHNLIADAMAAVSGAESASVRGFRYGTHVPAGWPITMEDIYHYVPIAAKLG
RTTKACGADLKFAIEQSTQGTFASDPSLWAGGWMFGYNGVSFDLDACDGLLGTTPAPINGPTLAFPTRPWGTNRGSNIKV
NGLPLKEMDIYDGRATIDGAPNPTYQQCLSAEGGPAYEGYRVAGYWYADDKTTINNCNPCRGRQVQVVKTDGSIVQVAGP
GASATLPPSEQLMDITEAVVKYLRENLGGTVTAANLPSHRLTVKRLPTISPAGYNFKMIQPLKGASTATCPTL

Sequences:

>Translated_713_residues
MTTHDAVRGLVAQPRARNKRFNKLCAGTVLASASLISAAALASSAPAPRGGSGEVTLIHTGDIHGHLVPRPNLRSDALGY
RGVSMEGGVARMYTVIKALRALATKDGVDRSLLINTGDTLQGSGEALFSRGQAMIDVLNAFGFVAHAPGNWDFLYGTGRF
EETFKGSATAPPLANWNALASNLYYANQFDDTALCGAKATDPATGVPRPLRRVLPTHSIRQVGKVKVGILGMTTARAIAA
VGTSVTQNYLFTDAKAEVPCLVDKLRTVDKVDVVVMISELEMARDIEIAETLAPSPDVILNSDMHERTTAPIVVDHADGR
NTLIVEEGQDGTAVGNLKLRVKNGRVADWSFKQIIVAEGIPEDKTIAAKVAKARAPFVAGSFVPGQKVTVGGNTTELLRP
VDETIAFTEVDLHRSNFVDEDMPGVVEGSSHNLIADAMAAVSGAESASVRGFRYGTHVPAGWPITMEDIYHYVPIAAKLG
RTTKACGADLKFAIEQSTQGTFASDPSLWAGGWMFGYNGVSFDLDACDGLLGTTPAPINGPTLAFPTRPWGTNRGSNIKV
NGLPLKEMDIYDGRATIDGAPNPTYQQCLSAEGGPAYEGYRVAGYWYADDKTTINNCNPCRGRQVQVVKTDGSIVQVAGP
GASATLPPSEQLMDITEAVVKYLRENLGGTVTAANLPSHRLTVKRLPTISPAGYNFKMIQPLKGASTATCPTL
>Mature_712_residues
TTHDAVRGLVAQPRARNKRFNKLCAGTVLASASLISAAALASSAPAPRGGSGEVTLIHTGDIHGHLVPRPNLRSDALGYR
GVSMEGGVARMYTVIKALRALATKDGVDRSLLINTGDTLQGSGEALFSRGQAMIDVLNAFGFVAHAPGNWDFLYGTGRFE
ETFKGSATAPPLANWNALASNLYYANQFDDTALCGAKATDPATGVPRPLRRVLPTHSIRQVGKVKVGILGMTTARAIAAV
GTSVTQNYLFTDAKAEVPCLVDKLRTVDKVDVVVMISELEMARDIEIAETLAPSPDVILNSDMHERTTAPIVVDHADGRN
TLIVEEGQDGTAVGNLKLRVKNGRVADWSFKQIIVAEGIPEDKTIAAKVAKARAPFVAGSFVPGQKVTVGGNTTELLRPV
DETIAFTEVDLHRSNFVDEDMPGVVEGSSHNLIADAMAAVSGAESASVRGFRYGTHVPAGWPITMEDIYHYVPIAAKLGR
TTKACGADLKFAIEQSTQGTFASDPSLWAGGWMFGYNGVSFDLDACDGLLGTTPAPINGPTLAFPTRPWGTNRGSNIKVN
GLPLKEMDIYDGRATIDGAPNPTYQQCLSAEGGPAYEGYRVAGYWYADDKTTINNCNPCRGRQVQVVKTDGSIVQVAGPG
ASATLPPSEQLMDITEAVVKYLRENLGGTVTAANLPSHRLTVKRLPTISPAGYNFKMIQPLKGASTATCPTL

Specific function: Unknown

COG id: COG0737

COG function: function code F; 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI4505467, Length=373, Percent_Identity=25.7372654155496, Blast_Score=69, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 75634; Mature: 75502

Theoretical pI: Translated: 7.15; Mature: 7.15

Prosite motif: PS00785 5_NUCLEOTIDASE_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTHDAVRGLVAQPRARNKRFNKLCAGTVLASASLISAAALASSAPAPRGGSGEVTLIHT
CCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEE
GDIHGHLVPRPNLRSDALGYRGVSMEGGVARMYTVIKALRALATKDGVDRSLLINTGDTL
CCCCEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCC
QGSGEALFSRGQAMIDVLNAFGFVAHAPGNWDFLYGTGRFEETFKGSATAPPLANWNALA
CCCCHHHHHCCHHHHHHHHHHCEEEECCCCEEEEEECCCCHHHCCCCCCCCCCCCHHHHH
SNLYYANQFDDTALCGAKATDPATGVPRPLRRVLPTHSIRQVGKVKVGILGMTTARAIAA
HCCEEECCCCCCCCCCCCCCCCCCCCCHHHHHHCCCHHHHHHCCEEEEEEEHHHHHHHHH
VGTSVTQNYLFTDAKAEVPCLVDKLRTVDKVDVVVMISELEMARDIEIAETLAPSPDVIL
HHHHHHHCEEEECCCCCCHHHHHHHHCCCCCEEEEEEEHHHHHHCCHHHHHCCCCCCEEE
NSDMHERTTAPIVVDHADGRNTLIVEEGQDGTAVGNLKLRVKNGRVADWSFKQIIVAEGI
CCCCCCCCCCCEEEECCCCCEEEEEECCCCCCEEEEEEEEEECCEEECCCCEEEEEECCC
PEDKTIAAKVAKARAPFVAGSFVPGQKVTVGGNTTELLRPVDETIAFTEVDLHRSNFVDE
CCCHHHHHHHHHHCCCEEECCCCCCCEEEECCCHHHHHHHHHHHEEEEEEECHHHCCCCC
DMPGVVEGSSHNLIADAMAAVSGAESASVRGFRYGTHVPAGWPITMEDIYHYVPIAAKLG
CCCCCEECCCCCHHHHHHHHHCCCCCCCCCEEECCCCCCCCCCEEHHHHHHHHHHHHHHC
RTTKACGADLKFAIEQSTQGTFASDPSLWAGGWMFGYNGVSFDLDACDGLLGTTPAPING
CCHHHCCCCEEEEEECCCCCCCCCCCCCEECCEEECCCCCEEEHHHHCCCCCCCCCCCCC
PTLAFPTRPWGTNRGSNIKVNGLPLKEMDIYDGRATIDGAPNPTYQQCLSAEGGPAYEGY
CEEECCCCCCCCCCCCEEEECCCCCCCEEECCCCEEECCCCCHHHHHHHCCCCCCCCCCE
RVAGYWYADDKTTINNCNPCRGRQVQVVKTDGSIVQVAGPGASATLPPSEQLMDITEAVV
EEEEEEECCCCCCCCCCCCCCCCEEEEEECCCCEEEEECCCCCCCCCCHHHHHHHHHHHH
KYLRENLGGTVTAANLPSHRLTVKRLPTISPAGYNFKMIQPLKGASTATCPTL
HHHHHHCCCEEEEECCCCCCEEHHHCCCCCCCCCCEEEECCCCCCCCCCCCCC
>Mature Secondary Structure 
TTHDAVRGLVAQPRARNKRFNKLCAGTVLASASLISAAALASSAPAPRGGSGEVTLIHT
CCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEE
GDIHGHLVPRPNLRSDALGYRGVSMEGGVARMYTVIKALRALATKDGVDRSLLINTGDTL
CCCCEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCC
QGSGEALFSRGQAMIDVLNAFGFVAHAPGNWDFLYGTGRFEETFKGSATAPPLANWNALA
CCCCHHHHHCCHHHHHHHHHHCEEEECCCCEEEEEECCCCHHHCCCCCCCCCCCCHHHHH
SNLYYANQFDDTALCGAKATDPATGVPRPLRRVLPTHSIRQVGKVKVGILGMTTARAIAA
HCCEEECCCCCCCCCCCCCCCCCCCCCHHHHHHCCCHHHHHHCCEEEEEEEHHHHHHHHH
VGTSVTQNYLFTDAKAEVPCLVDKLRTVDKVDVVVMISELEMARDIEIAETLAPSPDVIL
HHHHHHHCEEEECCCCCCHHHHHHHHCCCCCEEEEEEEHHHHHHCCHHHHHCCCCCCEEE
NSDMHERTTAPIVVDHADGRNTLIVEEGQDGTAVGNLKLRVKNGRVADWSFKQIIVAEGI
CCCCCCCCCCCEEEECCCCCEEEEEECCCCCCEEEEEEEEEECCEEECCCCEEEEEECCC
PEDKTIAAKVAKARAPFVAGSFVPGQKVTVGGNTTELLRPVDETIAFTEVDLHRSNFVDE
CCCHHHHHHHHHHCCCEEECCCCCCCEEEECCCHHHHHHHHHHHEEEEEEECHHHCCCCC
DMPGVVEGSSHNLIADAMAAVSGAESASVRGFRYGTHVPAGWPITMEDIYHYVPIAAKLG
CCCCCEECCCCCHHHHHHHHHCCCCCCCCCEEECCCCCCCCCCEEHHHHHHHHHHHHHHC
RTTKACGADLKFAIEQSTQGTFASDPSLWAGGWMFGYNGVSFDLDACDGLLGTTPAPING
CCHHHCCCCEEEEEECCCCCCCCCCCCCEECCEEECCCCCEEEHHHHCCCCCCCCCCCCC
PTLAFPTRPWGTNRGSNIKVNGLPLKEMDIYDGRATIDGAPNPTYQQCLSAEGGPAYEGY
CEEECCCCCCCCCCCCEEEECCCCCCCEEECCCCEEECCCCCHHHHHHHCCCCCCCCCCE
RVAGYWYADDKTTINNCNPCRGRQVQVVKTDGSIVQVAGPGASATLPPSEQLMDITEAVV
EEEEEEECCCCCCCCCCCCCCCCEEEEEECCCCEEEEECCCCCCCCCCHHHHHHHHHHHH
KYLRENLGGTVTAANLPSHRLTVKRLPTISPAGYNFKMIQPLKGASTATCPTL
HHHHHHCCCEEEEECCCCCCEEHHHCCCCCCCCCCEEEECCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA