| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is 74317299
Identifier: 74317299
GI number: 74317299
Start: 1347466
End: 1348752
Strand: Reverse
Name: 74317299
Synonym: Tbd_1281
Alternate gene names: NA
Gene position: 1348752-1347466 (Counterclockwise)
Preceding gene: 74317300
Following gene: 74317297
Centisome position: 46.35
GC content: 66.98
Gene sequence:
>1287_bases ATGACAGCTTCGCAGGCCGCAACGACACGACGGGAAGACGCACGCGTCTTCTGGGCCGACGCCTACCTTGCCGTGCGCCA GCGCAGCAAGGCGCTCTGCGCGCCGCTCGCCGCCGAGGACTACGTGATCCAGACCGCCCCCGAGGCGAGCCCCGCAAAAT GGCATCTCGCACACGTGAGCTGGTTCTTCGAGACCTTTCTGCTGCGCGACTATCTTGCCGGTTACCGCGACTTCCATCCG CGCTTCGGCTATCTCTTCAATTCGTATTACGAGCAGGTCGGCGAATTCCATCCTCGTGCGCACCGCGGCTTCCTGTCGCG TCCGAGCGTCGAGGAAATCCTTCGCTATCGTGCCCACGTCGACGAAGCGATGCTCAAACTCATGCAAGGCGCCGGCGGCG CCGTCTGGCCCGAAATCGAGAAGCGCCTCGCGATCGGCCTCAATCACGAGCAACAGCATCAGGAACTGCTGTTGACCGAT CTCAAGCTCAATCTCTACGCCAATCCGCTGCGCCCGGCGTACCGCGACGACCTGCCCGCCGTGCCCGGCGGGCTCGCGCC GGACCTCGGCTGGCAGTCTTTTCCGGGCGGCGTGCACGAGATGGGCGCGCGCGGCGACGGTTTCGCCTACGACAACGAAA TGCCGCGCCACCGCAGCTATGTCGAGCCCTTCCACCTGGCGACGCGCCTCGTCACCAACGGCGAGTATCTCGGTTTCATC GACGACGGCGGCTACGTCAATCCCGCGCTTTGGCTCGCCGACGGCTGGGCCACGCTCAAGCGTCTCGGCTGGAGCGGCCC GCTCTACTGGGAGCGGGTCGACGGCGTGTGGCAGCAATACACGCTCGGCGGCGTGCGCCGGCTCGACCCCGAGCAGCCGC TCTGTCACGTCAGCTACTACGAGGCGGAGGCCTACGCGACCTGGGCCGGCAAGCGGCTGCCGACCGAAGTCGAATGGGAA ATCGGTGCAGCGGGCCTTCCGGTGCGCGGCAATCTGCGCGACGCCGGCCACTTCCATCCCGTCGTCGCGCCGACCGGCGG CGGCCTGCTGCAGATGTTCGGCGACGTCTGGGAGCACACGGGCTCGGCCTACCTGCCTTATCCCGGCTTTCGCACCGCGC CCGGCGCCCTCGGCGAATACAACGGCAAGTTCATGTGCGGTCAGATGGTCCTGCGCGGCGGTTCGTGCGTGACCCCGGCC GACCACATCCGCGCGAGCTACCGCAACTTCTTCTATCCGCACGAACGCTGGCAGTTCCAGGGCATCCGGCTCGCCGACGA CGCGTAG
Upstream 100 bases:
>100_bases GCCACCTATGATCGGAGGGGCAGCGTCGCGGCCGAGCCAAGCCGCATTCTCCACGCGCCCGCCCCCTTCCCACGAACCCT CGAACCCCTCAGGAGGCGCG
Downstream 100 bases:
>100_bases CCGGCGCGGCTCAGCGCGTCGCCGCCGCAACCGCCGCGACCGCGGTGTCGAGTTGCTCGCGAGTGAGGTAGAAGTGCGGC GAGAAACGCACGCCGCCGCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 428; Mature: 427
Protein sequence:
>428_residues MTASQAATTRREDARVFWADAYLAVRQRSKALCAPLAAEDYVIQTAPEASPAKWHLAHVSWFFETFLLRDYLAGYRDFHP RFGYLFNSYYEQVGEFHPRAHRGFLSRPSVEEILRYRAHVDEAMLKLMQGAGGAVWPEIEKRLAIGLNHEQQHQELLLTD LKLNLYANPLRPAYRDDLPAVPGGLAPDLGWQSFPGGVHEMGARGDGFAYDNEMPRHRSYVEPFHLATRLVTNGEYLGFI DDGGYVNPALWLADGWATLKRLGWSGPLYWERVDGVWQQYTLGGVRRLDPEQPLCHVSYYEAEAYATWAGKRLPTEVEWE IGAAGLPVRGNLRDAGHFHPVVAPTGGGLLQMFGDVWEHTGSAYLPYPGFRTAPGALGEYNGKFMCGQMVLRGGSCVTPA DHIRASYRNFFYPHERWQFQGIRLADDA
Sequences:
>Translated_428_residues MTASQAATTRREDARVFWADAYLAVRQRSKALCAPLAAEDYVIQTAPEASPAKWHLAHVSWFFETFLLRDYLAGYRDFHP RFGYLFNSYYEQVGEFHPRAHRGFLSRPSVEEILRYRAHVDEAMLKLMQGAGGAVWPEIEKRLAIGLNHEQQHQELLLTD LKLNLYANPLRPAYRDDLPAVPGGLAPDLGWQSFPGGVHEMGARGDGFAYDNEMPRHRSYVEPFHLATRLVTNGEYLGFI DDGGYVNPALWLADGWATLKRLGWSGPLYWERVDGVWQQYTLGGVRRLDPEQPLCHVSYYEAEAYATWAGKRLPTEVEWE IGAAGLPVRGNLRDAGHFHPVVAPTGGGLLQMFGDVWEHTGSAYLPYPGFRTAPGALGEYNGKFMCGQMVLRGGSCVTPA DHIRASYRNFFYPHERWQFQGIRLADDA >Mature_427_residues TASQAATTRREDARVFWADAYLAVRQRSKALCAPLAAEDYVIQTAPEASPAKWHLAHVSWFFETFLLRDYLAGYRDFHPR FGYLFNSYYEQVGEFHPRAHRGFLSRPSVEEILRYRAHVDEAMLKLMQGAGGAVWPEIEKRLAIGLNHEQQHQELLLTDL KLNLYANPLRPAYRDDLPAVPGGLAPDLGWQSFPGGVHEMGARGDGFAYDNEMPRHRSYVEPFHLATRLVTNGEYLGFID DGGYVNPALWLADGWATLKRLGWSGPLYWERVDGVWQQYTLGGVRRLDPEQPLCHVSYYEAEAYATWAGKRLPTEVEWEI GAAGLPVRGNLRDAGHFHPVVAPTGGGLLQMFGDVWEHTGSAYLPYPGFRTAPGALGEYNGKFMCGQMVLRGGSCVTPAD HIRASYRNFFYPHERWQFQGIRLADDA
Specific function: Unknown
COG id: COG1262
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI257470975, Length=267, Percent_Identity=27.3408239700375, Blast_Score=71, Evalue=2e-12, Organism=Homo sapiens, GI38202250, Length=279, Percent_Identity=26.1648745519713, Blast_Score=71, Evalue=2e-12, Organism=Homo sapiens, GI257470977, Length=209, Percent_Identity=28.2296650717703, Blast_Score=70, Evalue=4e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 48338; Mature: 48207
Theoretical pI: Translated: 6.56; Mature: 6.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTASQAATTRREDARVFWADAYLAVRQRSKALCAPLAAEDYVIQTAPEASPAKWHLAHVS CCCCHHHHCCCCCCEEEEHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCEEEHHHHH WFFETFLLRDYLAGYRDFHPRFGYLFNSYYEQVGEFHPRAHRGFLSRPSVEEILRYRAHV HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHCCCCCCCCHHHHHHHHHHH DEAMLKLMQGAGGAVWPEIEKRLAIGLNHEQQHQELLLTDLKLNLYANPLRPAYRDDLPA HHHHHHHHHCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHEEEEEEECCCCCHHHCCCCC VPGGLAPDLGWQSFPGGVHEMGARGDGFAYDNEMPRHRSYVEPFHLATRLVTNGEYLGFI CCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCHHHHCCHHHHHHHHEECCCEEEEE DDGGYVNPALWLADGWATLKRLGWSGPLYWERVDGVWQQYTLGGVRRLDPEQPLCHVSYY CCCCEECCEEEEECCHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEE EAEAYATWAGKRLPTEVEWEIGAAGLPVRGNLRDAGHFHPVVAPTGGGLLQMFGDVWEHT EHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCEEECCCCHHHHHHHHHHHHC GSAYLPYPGFRTAPGALGEYNGKFMCGQMVLRGGSCVTPADHIRASYRNFFYPHERWQFQ CCEECCCCCCCCCCCCCCCCCCCEEEHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCEEEC GIRLADDA CEEECCCC >Mature Secondary Structure TASQAATTRREDARVFWADAYLAVRQRSKALCAPLAAEDYVIQTAPEASPAKWHLAHVS CCCHHHHCCCCCCEEEEHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCEEEHHHHH WFFETFLLRDYLAGYRDFHPRFGYLFNSYYEQVGEFHPRAHRGFLSRPSVEEILRYRAHV HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHCCCCCCCCHHHHHHHHHHH DEAMLKLMQGAGGAVWPEIEKRLAIGLNHEQQHQELLLTDLKLNLYANPLRPAYRDDLPA HHHHHHHHHCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHEEEEEEECCCCCHHHCCCCC VPGGLAPDLGWQSFPGGVHEMGARGDGFAYDNEMPRHRSYVEPFHLATRLVTNGEYLGFI CCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCHHHHCCHHHHHHHHEECCCEEEEE DDGGYVNPALWLADGWATLKRLGWSGPLYWERVDGVWQQYTLGGVRRLDPEQPLCHVSYY CCCCEECCEEEEECCHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEE EAEAYATWAGKRLPTEVEWEIGAAGLPVRGNLRDAGHFHPVVAPTGGGLLQMFGDVWEHT EHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCEEECCCCHHHHHHHHHHHHC GSAYLPYPGFRTAPGALGEYNGKFMCGQMVLRGGSCVTPADHIRASYRNFFYPHERWQFQ CCEECCCCCCCCCCCCCCCCCCCEEEHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCEEEC GIRLADDA CEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA