| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is 74317285
Identifier: 74317285
GI number: 74317285
Start: 1331079
End: 1331612
Strand: Direct
Name: 74317285
Synonym: Tbd_1267
Alternate gene names: NA
Gene position: 1331079-1331612 (Clockwise)
Preceding gene: 74317284
Following gene: 74317286
Centisome position: 45.74
GC content: 67.04
Gene sequence:
>534_bases ATGGCGACGATTCGATTCCTTCGCCAGGCCGGGATGCTTGCGCTGGCATTCAGCCTGTTTGCAGGCAGTCCCGCAGCCGC CCAGAACAACGCCGAATACCGCGTCAAGGCCGGGTTTCTGTACAACTTCATCGCGTTCACCGAGTGGCCGGCAGGCGTCG GGAGCCGGCTCACGCTCTGCGTCCACGGTGGCCACCCCTTTAACGGCGAACTGCACGCGCTAGAGGGCAAGACGGTCAAC GGCCGCACGCTTTCGCTCCGCCACACCGAAGGACTTCATCAGCTGAAAGGTTGCCAGGTCGTGTTCGTTGCACGCGCGGC GATCGACAGCTTGCCGCGCGTTGTCGACGCGCTGCGCGGCGAGCCCGTGCTGATCGTGGCCGATAGTCCCGGCGCGCTCG ACGCCGGCGCCGGCATCAATCTGCTGCTGCGGCAGGACCGCGTCGCGTTCGAGGTGAATCTGGGCGCGACGCGCGCTGCG CGGCTCGGCCTGAGTTCGAAGCTGCTGCGGCTCGCGAGCGAGGTGCGGCGATGA
Upstream 100 bases:
>100_bases GACTACGCCCAGCCCGGCTCGGCGTTCAACTGGCAGAACGTTTTCGAGCAGGACGGGCGGAGTGCACGGCTGAAGGCCGT GTACCGATTCTGAGCGGACG
Downstream 100 bases:
>100_bases GCCCCGAGGGAACGTCGACGACGCTGCGGGCGCGGCTGCGGCGCACGAGCCTGATCACGCTCGCGGTCGCCCTCGGCATC GTCGCCGTGATCATCATGGC
Product: putative transmembrane protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 177; Mature: 176
Protein sequence:
>177_residues MATIRFLRQAGMLALAFSLFAGSPAAAQNNAEYRVKAGFLYNFIAFTEWPAGVGSRLTLCVHGGHPFNGELHALEGKTVN GRTLSLRHTEGLHQLKGCQVVFVARAAIDSLPRVVDALRGEPVLIVADSPGALDAGAGINLLLRQDRVAFEVNLGATRAA RLGLSSKLLRLASEVRR
Sequences:
>Translated_177_residues MATIRFLRQAGMLALAFSLFAGSPAAAQNNAEYRVKAGFLYNFIAFTEWPAGVGSRLTLCVHGGHPFNGELHALEGKTVN GRTLSLRHTEGLHQLKGCQVVFVARAAIDSLPRVVDALRGEPVLIVADSPGALDAGAGINLLLRQDRVAFEVNLGATRAA RLGLSSKLLRLASEVRR >Mature_176_residues ATIRFLRQAGMLALAFSLFAGSPAAAQNNAEYRVKAGFLYNFIAFTEWPAGVGSRLTLCVHGGHPFNGELHALEGKTVNG RTLSLRHTEGLHQLKGCQVVFVARAAIDSLPRVVDALRGEPVLIVADSPGALDAGAGINLLLRQDRVAFEVNLGATRAAR LGLSSKLLRLASEVRR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18914; Mature: 18783
Theoretical pI: Translated: 10.81; Mature: 10.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATIRFLRQAGMLALAFSLFAGSPAAAQNNAEYRVKAGFLYNFIAFTEWPAGVGSRLTLC CHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCEEEEECCEEEHHHHCCCCCCCCCEEEEE VHGGHPFNGELHALEGKTVNGRTLSLRHTEGLHQLKGCQVVFVARAAIDSLPRVVDALRG EECCCCCCCCEEEECCCEECCEEEEEECCCCHHHHCCCEEEEEEHHHHHHHHHHHHHHCC EPVLIVADSPGALDAGAGINLLLRQDRVAFEVNLGATRAARLGLSSKLLRLASEVRR CCEEEEECCCCCCCCCCCEEEEEECCCEEEEEECCCCHHHHCCHHHHHHHHHHHHCC >Mature Secondary Structure ATIRFLRQAGMLALAFSLFAGSPAAAQNNAEYRVKAGFLYNFIAFTEWPAGVGSRLTLC HHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCEEEEECCEEEHHHHCCCCCCCCCEEEEE VHGGHPFNGELHALEGKTVNGRTLSLRHTEGLHQLKGCQVVFVARAAIDSLPRVVDALRG EECCCCCCCCEEEECCCEECCEEEEEECCCCHHHHCCCEEEEEEHHHHHHHHHHHHHHCC EPVLIVADSPGALDAGAGINLLLRQDRVAFEVNLGATRAARLGLSSKLLRLASEVRR CCEEEEECCCCCCCCCCCEEEEEECCCEEEEEECCCCHHHHCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA