| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is nuoL [H]
Identifier: 74317171
GI number: 74317171
Start: 1206570
End: 1208579
Strand: Direct
Name: nuoL [H]
Synonym: Tbd_1153
Alternate gene names: 74317171
Gene position: 1206570-1208579 (Clockwise)
Preceding gene: 74317170
Following gene: 74317172
Centisome position: 41.47
GC content: 63.33
Gene sequence:
>2010_bases ATGCGGATGGACATGCAGACGCTTTATCTGGTCGTGGCGCTCGCGCCGCTGGTCGGTGCGATCATCGCCGGGCTGTTCGG CAGGCTCGTCGGCCGCGTCGGTGCGCACACCGCGGCGATCGCCGGGGTGGCCGTGTCGTTCATCGCCTCGGTACTCGTGT TCCAGGACGTGCTCGCGGGCAACGTCTACAACGGCACGGTCTACACGTGGATGACGGTCGGCGAGCTACGTTTCGAAGTC GGCTTCCTGATCGATTCGCTGTCGGCGATGATGATGCTGGTGGTGACCTTCGTCTCGCTCATGGTGCACGTCTACACCAT CGGCTACATGCACGACGACCCGGGCTACCAGCGTTTCTTCAGCTACATCTCGCTCTTCACCTTCTCGATGCTCATGCTCG TCATGAGCAACAACTTCCTGCAGCTGTTCTTCGGCTGGGAGGCGGTGGGCCTCGTTTCCTATCTCCTCATCGGCTTCTGG TACACGAAGGAAACCGCGATCTACGCCAACCTCAAGGCGTTCCTCGTCAACCGCGTGGGTGACTTCGGTTTCATCCTCGG CATCGGCCTGGTCCTCGCGTATTTCGGCTCCCTCGATTACGCCACGGTCTTTGCCAAGGCGCCCGCGCTCGCCGACGAGA CGATCACGCTGTGGCCGGACAGTCCGTGGATGCTGATGACCGTCATCGGCATCCTGCTGTTCATCGGTGCGATGGGGAAA TCGGCCCAGTTTCCGCTGCACGTCTGGCTGCCCGATTCGATGGAAGGCCCGACGCCGATTTCGGCGCTGATCCACGCCGC GACGATGGTCACCGCCGGCATCTTCATGGTCGCGCGCATGTCGCCGTTGTACGAACTGTCCGACGTCGCGCTGTCGTTCA TCATGATCATCGGTGCCGTCACCGCGCTGTTCATGGGCCTGCTCGGCATCGTGCAGAATGACATCAAGCGGGTCGTCGCG TATTCGACGCTCTCGCAACTGGGCTACATGACCGTCGCGCTCGGCGCGTCCGCGTATTCGGTCGCGGTGTTCCACCTCAT GACGCACGCCTTCTTCAAGGCCTTGCTGTTCCTCGCCGCAGGCAGCGTCATCATCGCGCTGCACCACAACCAGGACATCC GCTACATGGGCGGACTGAAGAAATACATGCCGATCACCTGGATCACCTCGCTGATCGGGTCGCTCGCGCTGATCGGCACA CCCTTCCTGTCGGGCTTCTATTCCAAGGAAAGCATCATCGAAGCGGTCAGACTCTCGCACCTGCCGACCGCACAGATTGC CTACTGGGCGGTGCTGATCGGCGTGTTCGTCACGGCCTTCTATTCGTTCCGCATGTACTTCCTCGTATTCCACGGCAAGG AGCGTTTCCGCCAGGGTCACGCGCACGGCAACGAGCCCGACGCGCACGACGATCACGGGCATGGCCACGGCGGCACGCCG CACGAAACCCCGTGGGTCGTGACCGGGCCACTGCTGGCGCTCGCGCTGCCGTCGCTGGCGATCGGCTACATGACAATCGA GCCGATGCTGTTCGGCGATTTCTTCGACCGGGCGATCTACGTCTCCGACCGCCACCCCGTGATGGTCGAGCTCAACCAGC ATTTCCATGGGGCGGCCGAAATGGGCCTCCATGCGCTGGCGACACTGCCGTTCTGGCTGGCGGCAGCCGGCGTCGCGCTC GCGGCCGTGTTCTACCTGCGGCGTCCCGACATCCCGGCGGCGCTCGCGCAGCGCTTCGCGCCGATTCACCGCATGCTGCT CAACAAATACTGGTTCGACGAGCTCTACAGCTGGGCGTTTGCCAAGGGCGCGCGCGTCCTCGGCGGCTCGCTGTGGCGAC GCGGCGACCAGGCCTTCATCGACGGCGTCCTCGTCAACGGCTCGGCGCACGTGGTCGAGCGTGTCTCCCGTCTGACCAAG CTTGTCCAGTCCGGCTACATCTACCATTACGCCTTCGCCATGCTGATCGGGGTCGTCGCCCTGGTGACCTGGTTCGCGCG GCTTAACTAA
Upstream 100 bases:
>100_bases TGGCGGCGGCCGAATCCGCGATCGGTCTAGCGATCCTGGTGCTGTTGTTCCGCAACCTGCGCACGATCAACGTCGACGAC CTCGACCAATTGAAAGGCTG
Downstream 100 bases:
>100_bases CAACAACGCCCATGTTCGGACAGTCGATTCTTTCCCTCGTCATCTGGGTCCCGATTCTTGCAGGTGCAGCGGTCCTCGCC ACGGGCTCCGACCGCAACGC
Product: NADH dehydrogenase I subunit L
Products: NA
Alternate protein names: NADH dehydrogenase I subunit L; NDH-1 subunit L [H]
Number of amino acids: Translated: 669; Mature: 669
Protein sequence:
>669_residues MRMDMQTLYLVVALAPLVGAIIAGLFGRLVGRVGAHTAAIAGVAVSFIASVLVFQDVLAGNVYNGTVYTWMTVGELRFEV GFLIDSLSAMMMLVVTFVSLMVHVYTIGYMHDDPGYQRFFSYISLFTFSMLMLVMSNNFLQLFFGWEAVGLVSYLLIGFW YTKETAIYANLKAFLVNRVGDFGFILGIGLVLAYFGSLDYATVFAKAPALADETITLWPDSPWMLMTVIGILLFIGAMGK SAQFPLHVWLPDSMEGPTPISALIHAATMVTAGIFMVARMSPLYELSDVALSFIMIIGAVTALFMGLLGIVQNDIKRVVA YSTLSQLGYMTVALGASAYSVAVFHLMTHAFFKALLFLAAGSVIIALHHNQDIRYMGGLKKYMPITWITSLIGSLALIGT PFLSGFYSKESIIEAVRLSHLPTAQIAYWAVLIGVFVTAFYSFRMYFLVFHGKERFRQGHAHGNEPDAHDDHGHGHGGTP HETPWVVTGPLLALALPSLAIGYMTIEPMLFGDFFDRAIYVSDRHPVMVELNQHFHGAAEMGLHALATLPFWLAAAGVAL AAVFYLRRPDIPAALAQRFAPIHRMLLNKYWFDELYSWAFAKGARVLGGSLWRRGDQAFIDGVLVNGSAHVVERVSRLTK LVQSGYIYHYAFAMLIGVVALVTWFARLN
Sequences:
>Translated_669_residues MRMDMQTLYLVVALAPLVGAIIAGLFGRLVGRVGAHTAAIAGVAVSFIASVLVFQDVLAGNVYNGTVYTWMTVGELRFEV GFLIDSLSAMMMLVVTFVSLMVHVYTIGYMHDDPGYQRFFSYISLFTFSMLMLVMSNNFLQLFFGWEAVGLVSYLLIGFW YTKETAIYANLKAFLVNRVGDFGFILGIGLVLAYFGSLDYATVFAKAPALADETITLWPDSPWMLMTVIGILLFIGAMGK SAQFPLHVWLPDSMEGPTPISALIHAATMVTAGIFMVARMSPLYELSDVALSFIMIIGAVTALFMGLLGIVQNDIKRVVA YSTLSQLGYMTVALGASAYSVAVFHLMTHAFFKALLFLAAGSVIIALHHNQDIRYMGGLKKYMPITWITSLIGSLALIGT PFLSGFYSKESIIEAVRLSHLPTAQIAYWAVLIGVFVTAFYSFRMYFLVFHGKERFRQGHAHGNEPDAHDDHGHGHGGTP HETPWVVTGPLLALALPSLAIGYMTIEPMLFGDFFDRAIYVSDRHPVMVELNQHFHGAAEMGLHALATLPFWLAAAGVAL AAVFYLRRPDIPAALAQRFAPIHRMLLNKYWFDELYSWAFAKGARVLGGSLWRRGDQAFIDGVLVNGSAHVVERVSRLTK LVQSGYIYHYAFAMLIGVVALVTWFARLN >Mature_669_residues MRMDMQTLYLVVALAPLVGAIIAGLFGRLVGRVGAHTAAIAGVAVSFIASVLVFQDVLAGNVYNGTVYTWMTVGELRFEV GFLIDSLSAMMMLVVTFVSLMVHVYTIGYMHDDPGYQRFFSYISLFTFSMLMLVMSNNFLQLFFGWEAVGLVSYLLIGFW YTKETAIYANLKAFLVNRVGDFGFILGIGLVLAYFGSLDYATVFAKAPALADETITLWPDSPWMLMTVIGILLFIGAMGK SAQFPLHVWLPDSMEGPTPISALIHAATMVTAGIFMVARMSPLYELSDVALSFIMIIGAVTALFMGLLGIVQNDIKRVVA YSTLSQLGYMTVALGASAYSVAVFHLMTHAFFKALLFLAAGSVIIALHHNQDIRYMGGLKKYMPITWITSLIGSLALIGT PFLSGFYSKESIIEAVRLSHLPTAQIAYWAVLIGVFVTAFYSFRMYFLVFHGKERFRQGHAHGNEPDAHDDHGHGHGGTP HETPWVVTGPLLALALPSLAIGYMTIEPMLFGDFFDRAIYVSDRHPVMVELNQHFHGAAEMGLHALATLPFWLAAAGVAL AAVFYLRRPDIPAALAQRFAPIHRMLLNKYWFDELYSWAFAKGARVLGGSLWRRGDQAFIDGVLVNGSAHVVERVSRLTK LVQSGYIYHYAFAMLIGVVALVTWFARLN
Specific function: NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocat
COG id: COG1009
COG function: function code CP; NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the complex I subunit 5 family [H]
Homologues:
Organism=Homo sapiens, GI251831117, Length=413, Percent_Identity=42.1307506053269, Blast_Score=308, Evalue=2e-83, Organism=Escherichia coli, GI1788614, Length=672, Percent_Identity=37.0535714285714, Blast_Score=356, Evalue=2e-99, Organism=Escherichia coli, GI1788829, Length=423, Percent_Identity=30.9692671394799, Blast_Score=155, Evalue=6e-39, Organism=Escherichia coli, GI1788827, Length=415, Percent_Identity=30.1204819277108, Blast_Score=133, Evalue=3e-32, Organism=Escherichia coli, GI1788831, Length=355, Percent_Identity=29.0140845070423, Blast_Score=124, Evalue=2e-29, Organism=Escherichia coli, GI2367154, Length=350, Percent_Identity=25.1428571428571, Blast_Score=81, Evalue=2e-16, Organism=Escherichia coli, GI145693160, Length=356, Percent_Identity=25.2808988764045, Blast_Score=72, Evalue=1e-13, Organism=Escherichia coli, GI1788613, Length=329, Percent_Identity=25.8358662613982, Blast_Score=69, Evalue=9e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001750 - InterPro: IPR001516 - InterPro: IPR002128 - InterPro: IPR003945 - InterPro: IPR018393 [H]
Pfam domain/function: PF00361 Oxidored_q1; PF01010 Oxidored_q1_C; PF00662 Oxidored_q1_N [H]
EC number: =1.6.99.5 [H]
Molecular weight: Translated: 73766; Mature: 73766
Theoretical pI: Translated: 7.52; Mature: 7.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.8 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.8 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRMDMQTLYLVVALAPLVGAIIAGLFGRLVGRVGAHTAAIAGVAVSFIASVLVFQDVLAG CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC NVYNGTVYTWMTVGELRFEVGFLIDSLSAMMMLVVTFVSLMVHVYTIGYMHDDPGYQRFF CCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCHHHHHH SYISLFTFSMLMLVMSNNFLQLFFGWEAVGLVSYLLIGFWYTKETAIYANLKAFLVNRVG HHHHHHHHHHHHHHHCCCCEEEHCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCC DFGFILGIGLVLAYFGSLDYATVFAKAPALADETITLWPDSPWMLMTVIGILLFIGAMGK HHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCEEEECCCCCHHHHHHHHHHHHHHCCCC SAQFPLHVWLPDSMEGPTPISALIHAATMVTAGIFMVARMSPLYELSDVALSFIMIIGAV CCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH TALFMGLLGIVQNDIKRVVAYSTLSQLGYMTVALGASAYSVAVFHLMTHAFFKALLFLAA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHC GSVIIALHHNQDIRYMGGLKKYMPITWITSLIGSLALIGTPFLSGFYSKESIIEAVRLSH CCEEEEEECCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHC LPTAQIAYWAVLIGVFVTAFYSFRMYFLVFHGKERFRQGHAHGNEPDAHDDHGHGHGGTP CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCCCCCCCCCCCCCCC HETPWVVTGPLLALALPSLAIGYMTIEPMLFGDFFDRAIYVSDRHPVMVELNQHFHGAAE CCCCEEEEHHHHHHHHHHHHHHHHEEHHHHHHHHHCCEEEECCCCCEEEEECCCCCCHHH MGLHALATLPFWLAAAGVALAAVFYLRRPDIPAALAQRFAPIHRMLLNKYWFDELYSWAF HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH AKGARVLGGSLWRRGDQAFIDGVLVNGSAHVVERVSRLTKLVQSGYIYHYAFAMLIGVVA HCCHHHHHHHHHHCCCHHHHCCEEECCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH LVTWFARLN HHHHHHHCC >Mature Secondary Structure MRMDMQTLYLVVALAPLVGAIIAGLFGRLVGRVGAHTAAIAGVAVSFIASVLVFQDVLAG CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC NVYNGTVYTWMTVGELRFEVGFLIDSLSAMMMLVVTFVSLMVHVYTIGYMHDDPGYQRFF CCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCHHHHHH SYISLFTFSMLMLVMSNNFLQLFFGWEAVGLVSYLLIGFWYTKETAIYANLKAFLVNRVG HHHHHHHHHHHHHHHCCCCEEEHCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCC DFGFILGIGLVLAYFGSLDYATVFAKAPALADETITLWPDSPWMLMTVIGILLFIGAMGK HHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCEEEECCCCCHHHHHHHHHHHHHHCCCC SAQFPLHVWLPDSMEGPTPISALIHAATMVTAGIFMVARMSPLYELSDVALSFIMIIGAV CCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH TALFMGLLGIVQNDIKRVVAYSTLSQLGYMTVALGASAYSVAVFHLMTHAFFKALLFLAA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHC GSVIIALHHNQDIRYMGGLKKYMPITWITSLIGSLALIGTPFLSGFYSKESIIEAVRLSH CCEEEEEECCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHC LPTAQIAYWAVLIGVFVTAFYSFRMYFLVFHGKERFRQGHAHGNEPDAHDDHGHGHGGTP CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCCCCCCCCCCCCCCC HETPWVVTGPLLALALPSLAIGYMTIEPMLFGDFFDRAIYVSDRHPVMVELNQHFHGAAE CCCCEEEEHHHHHHHHHHHHHHHHEEHHHHHHHHHCCEEEECCCCCEEEEECCCCCCHHH MGLHALATLPFWLAAAGVALAAVFYLRRPDIPAALAQRFAPIHRMLLNKYWFDELYSWAF HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH AKGARVLGGSLWRRGDQAFIDGVLVNGSAHVVERVSRLTKLVQSGYIYHYAFAMLIGVVA HCCHHHHHHHHHHCCCHHHHCCEEECCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH LVTWFARLN HHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 10761919 [H]