| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
Click here to switch to the map view.
The map label for this gene is nuoK
Identifier: 74317170
GI number: 74317170
Start: 1206265
End: 1206570
Strand: Direct
Name: nuoK
Synonym: Tbd_1152
Alternate gene names: 74317170
Gene position: 1206265-1206570 (Clockwise)
Preceding gene: 74317169
Following gene: 74317171
Centisome position: 41.46
GC content: 54.9
Gene sequence:
>306_bases GTGATTTCCTTATCGCATTTTCTGGTGCTCGGAGGCGTCCTGTTCGCCATCGCCGTGCTGGGTATTTTTCTCAACCGCAA GAACGTCATCGTTCTCCTGATGGCGATCGAACTCATGCTGCTTGCGGTGAACATGAATTTCATCGCGTTTTCGCACTACC TCGGTGACGTCCACGGCCAGGTATTCGTCTTTTTCATCCTGACCGTGGCGGCGGCCGAATCCGCGATCGGTCTAGCGATC CTGGTGCTGTTGTTCCGCAACCTGCGCACGATCAACGTCGACGACCTCGACCAATTGAAAGGCTGA
Upstream 100 bases:
>100_bases CGCAGCAGGTGAAGGTCAAGCGTAACGACCGGTTGCGCATCATCAAGATGCCGGCCGAGAAAAAAGCCACGGCCGGCGCG CCGGCAGGGGGAGGGGACGC
Downstream 100 bases:
>100_bases TGCGGATGGACATGCAGACGCTTTATCTGGTCGTGGCGCTCGCGCCGCTGGTCGGTGCGATCATCGCCGGGCTGTTCGGC AGGCTCGTCGGCCGCGTCGG
Product: NADH dehydrogenase subunit K
Products: NA
Alternate protein names: NADH dehydrogenase I subunit K; NDH-1 subunit K
Number of amino acids: Translated: 101; Mature: 101
Protein sequence:
>101_residues MISLSHFLVLGGVLFAIAVLGIFLNRKNVIVLLMAIELMLLAVNMNFIAFSHYLGDVHGQVFVFFILTVAAAESAIGLAI LVLLFRNLRTINVDDLDQLKG
Sequences:
>Translated_101_residues MISLSHFLVLGGVLFAIAVLGIFLNRKNVIVLLMAIELMLLAVNMNFIAFSHYLGDVHGQVFVFFILTVAAAESAIGLAI LVLLFRNLRTINVDDLDQLKG >Mature_101_residues MISLSHFLVLGGVLFAIAVLGIFLNRKNVIVLLMAIELMLLAVNMNFIAFSHYLGDVHGQVFVFFILTVAAAESAIGLAI LVLLFRNLRTINVDDLDQLKG
Specific function: NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocat
COG id: COG0713
COG function: function code C; NADH:ubiquinone oxidoreductase subunit 11 or 4L (chain K)
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the complex I subunit 4L family
Homologues:
Organism=Escherichia coli, GI1788615, Length=101, Percent_Identity=34.6534653465347, Blast_Score=72, Evalue=8e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NUOK_THIDA (Q3SJP7)
Other databases:
- EMBL: CP000116 - RefSeq: YP_314910.1 - STRING: Q3SJP7 - GeneID: 3673224 - GenomeReviews: CP000116_GR - KEGG: tbd:Tbd_1152 - NMPDR: fig|292415.3.peg.1152 - eggNOG: COG0713 - HOGENOM: HBG673066 - OMA: VLMSIEL - ProtClustDB: PRK05715 - BioCyc: TDEN292415:TBD_1152-MONOMER - GO: GO:0006810 - HAMAP: MF_01456 - InterPro: IPR001133
Pfam domain/function: PF00420 Oxidored_q2
EC number: =1.6.99.5
Molecular weight: Translated: 11072; Mature: 11072
Theoretical pI: Translated: 6.80; Mature: 6.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
HASH(0x1bf97150)-; HASH(0x1b2f3f4c)-; HASH(0x1b160414)-;
Cys/Met content:
0.0 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MISLSHFLVLGGVLFAIAVLGIFLNRKNVIVLLMAIELMLLAVNMNFIAFSHYLGDVHGQ CCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VFVFFILTVAAAESAIGLAILVLLFRNLRTINVDDLDQLKG HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCH >Mature Secondary Structure MISLSHFLVLGGVLFAIAVLGIFLNRKNVIVLLMAIELMLLAVNMNFIAFSHYLGDVHGQ CCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VFVFFILTVAAAESAIGLAILVLLFRNLRTINVDDLDQLKG HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCH
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA