| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is 74316995
Identifier: 74316995
GI number: 74316995
Start: 1041654
End: 1042331
Strand: Reverse
Name: 74316995
Synonym: Tbd_0977
Alternate gene names: NA
Gene position: 1042331-1041654 (Counterclockwise)
Preceding gene: 74316996
Following gene: 74316994
Centisome position: 35.82
GC content: 70.06
Gene sequence:
>678_bases ATGAAGCGTCTGATCGTGCTTGCCTTCCCGCTTCTGCTCGCGGCCTGCGGCAGCGGAGGCCCGCCGCCGCCCGACTGGAA GACCGATTCGGCCGATCTGGTCGCGCGTTATCAGAAGCACGCGCTGCGCGGCGAAAACACGCTCGCCGAGCGCTACTTCC AGCAGGCCGTCGCCGCGACCGGAGGCGCCGGCCGAGTCCGCGAGACCGCGCGCCTGTGGCTTGTGCGTTGCGCCACCCGT CGCGCGATGCTGATCGACGATTCATGCGCCGAATATGCGGAACTCGCCGCGACCGAGGCCAAGCCCGATGCCGAGGACGC GGCCTACTTCCGCTTCGTCACCCTGCGCTGGCAGGATCTCGATCCGAGCCTGCTGCCCCGGCAGCATCGCGCGCTGCTCC GCGCCGAGGCCGCGCGCCGGCACGAGGCCCTCGCCGCGATCGACCATCCGCTCGCGCGTTTGCTCGACGCGAGCCTGCTG CTCATGCGCGGCGAAGCCGGACCCGCCACGCTGTCGCTCGCGACGGAAACCGCCTCGTCGAACGGCTGGCGCCACCCGCT GTTGACCTATCTCAAACTCGAGCAAGCGCAGGCCGCCAGCCGCGGCGATCACGCAACCGAGGCGCGCCTGGCACGACGCA TTCGTCTCGTCGAGGAAAATATCGCGGCCTCACCCTGA
Upstream 100 bases:
>100_bases TGCGCAGCGAAATCGACGACGCCGTGCGCAAGGCCAACGCGCTCGTCAACGAGATCAACAAGAAGTGGCCGTTTGCGCGC GACCCAGAGGTGAAGCTGCC
Downstream 100 bases:
>100_bases CCGGTTTAACGCCCTGCGGGCTGCTGCGCCGGCCGATGCTCGACGCCATGCGCGTGTCGGTGCACGCGCCGCGGAACCGG CGCCAAAGCCCGGCCCGCGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 225; Mature: 225
Protein sequence:
>225_residues MKRLIVLAFPLLLAACGSGGPPPPDWKTDSADLVARYQKHALRGENTLAERYFQQAVAATGGAGRVRETARLWLVRCATR RAMLIDDSCAEYAELAATEAKPDAEDAAYFRFVTLRWQDLDPSLLPRQHRALLRAEAARRHEALAAIDHPLARLLDASLL LMRGEAGPATLSLATETASSNGWRHPLLTYLKLEQAQAASRGDHATEARLARRIRLVEENIAASP
Sequences:
>Translated_225_residues MKRLIVLAFPLLLAACGSGGPPPPDWKTDSADLVARYQKHALRGENTLAERYFQQAVAATGGAGRVRETARLWLVRCATR RAMLIDDSCAEYAELAATEAKPDAEDAAYFRFVTLRWQDLDPSLLPRQHRALLRAEAARRHEALAAIDHPLARLLDASLL LMRGEAGPATLSLATETASSNGWRHPLLTYLKLEQAQAASRGDHATEARLARRIRLVEENIAASP >Mature_225_residues MKRLIVLAFPLLLAACGSGGPPPPDWKTDSADLVARYQKHALRGENTLAERYFQQAVAATGGAGRVRETARLWLVRCATR RAMLIDDSCAEYAELAATEAKPDAEDAAYFRFVTLRWQDLDPSLLPRQHRALLRAEAARRHEALAAIDHPLARLLDASLL LMRGEAGPATLSLATETASSNGWRHPLLTYLKLEQAQAASRGDHATEARLARRIRLVEENIAASP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24723; Mature: 24723
Theoretical pI: Translated: 8.84; Mature: 8.84
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRLIVLAFPLLLAACGSGGPPPPDWKTDSADLVARYQKHALRGENTLAERYFQQAVAAT CCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHC GGAGRVRETARLWLVRCATRRAMLIDDSCAEYAELAATEAKPDAEDAAYFRFVTLRWQDL CCCHHHHHHHHHHHHHHHHCCCEEECHHHHHHHHHHHHCCCCCCCHHHEEEEEEEEECCC DPSLLPRQHRALLRAEAARRHEALAAIDHPLARLLDASLLLMRGEAGPATLSLATETASS CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCC NGWRHPLLTYLKLEQAQAASRGDHATEARLARRIRLVEENIAASP CCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MKRLIVLAFPLLLAACGSGGPPPPDWKTDSADLVARYQKHALRGENTLAERYFQQAVAAT CCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHC GGAGRVRETARLWLVRCATRRAMLIDDSCAEYAELAATEAKPDAEDAAYFRFVTLRWQDL CCCHHHHHHHHHHHHHHHHCCCEEECHHHHHHHHHHHHCCCCCCCHHHEEEEEEEEECCC DPSLLPRQHRALLRAEAARRHEALAAIDHPLARLLDASLLLMRGEAGPATLSLATETASS CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCC NGWRHPLLTYLKLEQAQAASRGDHATEARLARRIRLVEENIAASP CCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA