| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is mtaD [H]
Identifier: 74316965
GI number: 74316965
Start: 1007134
End: 1008459
Strand: Reverse
Name: mtaD [H]
Synonym: Tbd_0947
Alternate gene names: 74316965
Gene position: 1008459-1007134 (Counterclockwise)
Preceding gene: 74316985
Following gene: 74316964
Centisome position: 34.66
GC content: 70.14
Gene sequence:
>1326_bases ATGAAAGCCTCCGCCGACCTTCTTCTCCTGCCGCAGTGGGTGGTCCCTGTCGACCCGGAAGGGGTGCTGACCGACCACGC CGTCGTCGTCGCGGACGGACGCATCGTCGACGTTCTGCCGGCCGAGGTGGCGCGCGCCCGCTACGCCGCTGCCAAGACGG TCGCGCTGCCGGGCGAGGCCCTGATCCCGGGCCTGGTCAACCTGCATGGCCACGCCGCGATGTCGCTGTTTCGCGGCTTC GCCGACGACCGCCCGCTGATGGCCTGGCTGACCGGGCACATCTGGCCGGCCGAGAAGAAGCACGTCTCCGAGACCTTCGT GCGCGATGGCACCCTGCTCGCGGCGGCCGAGATGCTCGCCGGCGGCATCACCACCTGCAACGACATGTACTTCTTCCCGC GGGCGGCGAGCGAAGCCTTCCTGCAGGCCGGCATGCGCGCGGTCGTCGGCATGATCGTGCTCGAATTCCCGACCGCCTAC GCCGCGGACGCCGACGGCTATCTGTCCAAGGGGCTCGCGCTGCGCGACGAATTCAGGGGCGAGCCGCTGCTCGGCTTCGC CTTCGCGCCGCACGCGCCGTACACGGTCTCGGACACAAGCTTCAGCCGTATCCACACCTTGGCCGACCAGCTCGGCCTGC CGATCCACACCCACATCCACGAAACCCGGGACGAGATCGCCGACAGCCTCAAGGAGCATGGCGTGCGTCCGCTCGAGCGG CTCGCCCGGCTCGGCCTGCTCGGGCCGAACTTCATCGGCGTGCACGCCGTGCACATGACCGAGGCCGAAACGGAGTTGCT GGCCGAGCACGGCTGCCACATCGCCCATTGCCCGACTTCCAACCTCAAGCTCGCATCGGGCGTCGCGCCCGTGGCCGAGT TCGCGCGCGCCGGCGTCGGCGTCGGCCTCGGTACCGATGGCGCCGCGAGCAGCAACCGCCTCGACCTCTTCGCCGAAATG CGGCTGGCCGCGCTGCTCGCCAAGGGCATGAGCGGCGACGCCGCCGCGCTGCCCGCGGCCGCGGCGCTGAAAGCGGCCAC GCTCGACGGCGCACGCGCGCTCAACCTCGATAGCGAGATCGGCAGCATCGCTGCCGGCAAGCGGGCCGACCTCGTCGCCG TGAACCTGCACGGCGTATCGCGGCAGCCCGTGTTTGACCCGGCTTCGCACCTGGTTTACGTTGCGGGGCGCGAAGACGTC ACCCACGTCTGGGTCGACGGCAAGCCCAAACTCAGGGAACGCAGCCTGGTCGGGCTCGACGCCGACGACCTCGCCGCCCG CGCCGTCTACTGGCGCACCAAACTCACCGCAGAAGGACAGTCATGA
Upstream 100 bases:
>100_bases CCGGCTTTATACCCAAGCTTCAAAGAGGGCGATTTTAGCATGGCCGCCTGCCCCGCCCGCCTTTGCCAAACGGCAGGCAA ACAGTGAGAATGCGGCCACC
Downstream 100 bases:
>100_bases GCAACGTCGACGCTGCCGAAATCGCCAAGTTTTCCGAGCTTGCCCACCGCTGGTGGGACCCGAACTCCGAATTCAAGCCG CTGCACGAAATCAACCCGCT
Product: N-ethylammeline chlorohydrolase
Products: NA
Alternate protein names: MTA/SAH deaminase [H]
Number of amino acids: Translated: 441; Mature: 441
Protein sequence:
>441_residues MKASADLLLLPQWVVPVDPEGVLTDHAVVVADGRIVDVLPAEVARARYAAAKTVALPGEALIPGLVNLHGHAAMSLFRGF ADDRPLMAWLTGHIWPAEKKHVSETFVRDGTLLAAAEMLAGGITTCNDMYFFPRAASEAFLQAGMRAVVGMIVLEFPTAY AADADGYLSKGLALRDEFRGEPLLGFAFAPHAPYTVSDTSFSRIHTLADQLGLPIHTHIHETRDEIADSLKEHGVRPLER LARLGLLGPNFIGVHAVHMTEAETELLAEHGCHIAHCPTSNLKLASGVAPVAEFARAGVGVGLGTDGAASSNRLDLFAEM RLAALLAKGMSGDAAALPAAAALKAATLDGARALNLDSEIGSIAAGKRADLVAVNLHGVSRQPVFDPASHLVYVAGREDV THVWVDGKPKLRERSLVGLDADDLAARAVYWRTKLTAEGQS
Sequences:
>Translated_441_residues MKASADLLLLPQWVVPVDPEGVLTDHAVVVADGRIVDVLPAEVARARYAAAKTVALPGEALIPGLVNLHGHAAMSLFRGF ADDRPLMAWLTGHIWPAEKKHVSETFVRDGTLLAAAEMLAGGITTCNDMYFFPRAASEAFLQAGMRAVVGMIVLEFPTAY AADADGYLSKGLALRDEFRGEPLLGFAFAPHAPYTVSDTSFSRIHTLADQLGLPIHTHIHETRDEIADSLKEHGVRPLER LARLGLLGPNFIGVHAVHMTEAETELLAEHGCHIAHCPTSNLKLASGVAPVAEFARAGVGVGLGTDGAASSNRLDLFAEM RLAALLAKGMSGDAAALPAAAALKAATLDGARALNLDSEIGSIAAGKRADLVAVNLHGVSRQPVFDPASHLVYVAGREDV THVWVDGKPKLRERSLVGLDADDLAARAVYWRTKLTAEGQS >Mature_441_residues MKASADLLLLPQWVVPVDPEGVLTDHAVVVADGRIVDVLPAEVARARYAAAKTVALPGEALIPGLVNLHGHAAMSLFRGF ADDRPLMAWLTGHIWPAEKKHVSETFVRDGTLLAAAEMLAGGITTCNDMYFFPRAASEAFLQAGMRAVVGMIVLEFPTAY AADADGYLSKGLALRDEFRGEPLLGFAFAPHAPYTVSDTSFSRIHTLADQLGLPIHTHIHETRDEIADSLKEHGVRPLER LARLGLLGPNFIGVHAVHMTEAETELLAEHGCHIAHCPTSNLKLASGVAPVAEFARAGVGVGLGTDGAASSNRLDLFAEM RLAALLAKGMSGDAAALPAAAALKAATLDGARALNLDSEIGSIAAGKRADLVAVNLHGVSRQPVFDPASHLVYVAGREDV THVWVDGKPKLRERSLVGLDADDLAARAVYWRTKLTAEGQS
Specific function: Catalyzes the deamination of 5-methylthioadenosine and S-adenosyl-L-homocysteine into 5-methylthioinosine and S-inosyl-L- homocysteine, respectively. Is also able to deaminate adenosine [H]
COG id: COG0402
COG function: function code FR; Cytosine deaminase and related metal-dependent hydrolases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the MTA/SAH deaminase family [H]
Homologues:
Organism=Homo sapiens, GI4758426, Length=392, Percent_Identity=27.8061224489796, Blast_Score=132, Evalue=6e-31, Organism=Escherichia coli, GI1789249, Length=347, Percent_Identity=28.8184438040346, Blast_Score=120, Evalue=2e-28, Organism=Escherichia coli, GI87082177, Length=404, Percent_Identity=25, Blast_Score=83, Evalue=4e-17, Organism=Caenorhabditis elegans, GI17540282, Length=394, Percent_Identity=23.3502538071066, Blast_Score=93, Evalue=3e-19, Organism=Saccharomyces cerevisiae, GI6319963, Length=370, Percent_Identity=23.7837837837838, Blast_Score=107, Evalue=5e-24, Organism=Drosophila melanogaster, GI24643849, Length=380, Percent_Identity=29.7368421052632, Blast_Score=125, Evalue=4e-29,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006680 - InterPro: IPR011059 [H]
Pfam domain/function: PF01979 Amidohydro_1 [H]
EC number: =3.5.4.28 [H]
Molecular weight: Translated: 46707; Mature: 46707
Theoretical pI: Translated: 6.20; Mature: 6.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKASADLLLLPQWVVPVDPEGVLTDHAVVVADGRIVDVLPAEVARARYAAAKTVALPGEA CCCCCCEEEECCEECCCCCCCCEECCEEEEECCEEEEECCHHHHHHHHHHHHEEECCCHH LIPGLVNLHGHAAMSLFRGFADDRPLMAWLTGHIWPAEKKHVSETFVRDGTLLAAAEMLA HCCHHHHCCHHHHHHHHHHCCCCCCHHHHHHCCCCCCCHHHHHHHHHCCCHHHHHHHHHH GGITTCNDMYFFPRAASEAFLQAGMRAVVGMIVLEFPTAYAADADGYLSKGLALRDEFRG CCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCCHHHHHCC EPLLGFAFAPHAPYTVSDTSFSRIHTLADQLGLPIHTHIHETRDEIADSLKEHGVRPLER CCEEEEEECCCCCEEECCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCHHHH LARLGLLGPNFIGVHAVHMTEAETELLAEHGCHIAHCPTSNLKLASGVAPVAEFARAGVG HHHHCCCCCCCEEEEEEEECHHHHHHHHHCCCEEEECCCCCCCHHCCCHHHHHHHHCCCC VGLGTDGAASSNRLDLFAEMRLAALLAKGMSGDAAALPAAAALKAATLDGARALNLDSEI CCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHCCHHHHHHHHHCCCCEEECCCHHH GSIAAGKRADLVAVNLHGVSRQPVFDPASHLVYVAGREDVTHVWVDGKPKLRERSLVGLD HHHCCCCCCCEEEEEECCCCCCCCCCCCCCEEEEECCCCEEEEEECCCCCCCCCCEECCC ADDLAARAVYWRTKLTAEGQS HHHHHHHHHEEEEEEECCCCC >Mature Secondary Structure MKASADLLLLPQWVVPVDPEGVLTDHAVVVADGRIVDVLPAEVARARYAAAKTVALPGEA CCCCCCEEEECCEECCCCCCCCEECCEEEEECCEEEEECCHHHHHHHHHHHHEEECCCHH LIPGLVNLHGHAAMSLFRGFADDRPLMAWLTGHIWPAEKKHVSETFVRDGTLLAAAEMLA HCCHHHHCCHHHHHHHHHHCCCCCCHHHHHHCCCCCCCHHHHHHHHHCCCHHHHHHHHHH GGITTCNDMYFFPRAASEAFLQAGMRAVVGMIVLEFPTAYAADADGYLSKGLALRDEFRG CCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCCHHHHHCC EPLLGFAFAPHAPYTVSDTSFSRIHTLADQLGLPIHTHIHETRDEIADSLKEHGVRPLER CCEEEEEECCCCCEEECCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCHHHH LARLGLLGPNFIGVHAVHMTEAETELLAEHGCHIAHCPTSNLKLASGVAPVAEFARAGVG HHHHCCCCCCCEEEEEEEECHHHHHHHHHCCCEEEECCCCCCCHHCCCHHHHHHHHCCCC VGLGTDGAASSNRLDLFAEMRLAALLAKGMSGDAAALPAAAALKAATLDGARALNLDSEI CCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHCCHHHHHHHHHCCCCEEECCCHHH GSIAAGKRADLVAVNLHGVSRQPVFDPASHLVYVAGREDVTHVWVDGKPKLRERSLVGLD HHHCCCCCCCEEEEEECCCCCCCCCCCCCCEEEEECCCCEEEEEECCCCCCCCCCEECCC ADDLAARAVYWRTKLTAEGQS HHHHHHHHHEEEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA