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The map label for this gene is rbn [C]

Identifier: 74316985

GI number: 74316985

Start: 1029122

End: 1030024

Strand: Reverse

Name: rbn [C]

Synonym: Tbd_0967

Alternate gene names: 74316985

Gene position: 1030024-1029122 (Counterclockwise)

Preceding gene: 74316986

Following gene: 74316965

Centisome position: 35.4

GC content: 65.89

Gene sequence:

>903_bases
ATGCTGAGTGTTCGCAGTCTGTTCGTCCTCGCCCGCAAGGTGGTGTCCGCCTACATCGCGGACTACGCACCGAGCATGGG
CGCCGCCATCGCCTATTACAGCGCGTTCTCGCTCGCCCCGCTTCTGGTGATCGTGATCGCGGTCGCCGGCGCCGTGTTCG
GCCGCGATGCCATCCAGGGTCAGATCGTCGCGCAGATCGGCGGACTGATCGGGCAGGAGGGCGCCATCCTCGTGGAACGT
CTCGTGCGCAGCGCGAGCGACACGGAAAAAGGGCTGGTCGCCGGCCTCGTCAGCGGCGGCGTCCTGGCACTCGGTGCGAC
GACCGTCTTTGCCGAACTGCAGCGCGCGCTCGATCGCATCTGGAAGGTGCCGAAATCCGAGAGGCCATCGGGCATCTGGG
CGCTGCTGCGCGCACGCCTGCTGTCCTTCGGCCTGATCCTGGGCCTCGCCTTCCTGCTCATGGTGTCGCTGATCGTAAGC
ACGGCGATCGCGGTGTTCGGCCGATGGACCGGCGCGCTCATGCCGGGATGGGAAGTCGTGCTGCAGTGCGTCAACATGGC
GATATCGCTGTCGATCACGACCCTGCTTTTCGCGATGATCTTCAAGCTCATGCCGTCCGCCGACGTCGCATGGCGCGACG
TGTGGATAGGCGCGGCGGTGACCGCGGTCCTCTTCGAGCTCGGAAAGCTGCTGATCGGGCTCTACCTCGGCAAAAGCGCG
CTCTCCGAATCCTTCGCCGCGGCCGGCTCGCTGGTGGTGCTGCTGGCCTGGGTCTACTATGCCTCGCAGATCTTCCTGCT
CGGTGCCGAGTTCACGAAGGTATACGCCGACGAACACGGTTCGCTGAAGCACGGGCAGAGCGCCTCAAGGGCCGCCGCGC
CGGTCGTCGCCGCAAAAGGCTAA

Upstream 100 bases:

>100_bases
ACGCAAGCGGCGCGCTTCGTGACACGCGTGCCGCGGCGCCTTTGCTATACCAAGAGCTCTCGCCGCGGGGGCCTCCCGGC
GGCAACGAAGGAGCCGTGCA

Downstream 100 bases:

>100_bases
GCGGGCGGTCGCACGCCAAAAAAGGCCGGCTGATGGATGCCGGTCTTTCAGGAAAATCTTCCGGTGAAAAGCGCCGCGCG
ACCCGCGCTACTTCCCGCTT

Product: ribonuclease BN

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 300; Mature: 300

Protein sequence:

>300_residues
MLSVRSLFVLARKVVSAYIADYAPSMGAAIAYYSAFSLAPLLVIVIAVAGAVFGRDAIQGQIVAQIGGLIGQEGAILVER
LVRSASDTEKGLVAGLVSGGVLALGATTVFAELQRALDRIWKVPKSERPSGIWALLRARLLSFGLILGLAFLLMVSLIVS
TAIAVFGRWTGALMPGWEVVLQCVNMAISLSITTLLFAMIFKLMPSADVAWRDVWIGAAVTAVLFELGKLLIGLYLGKSA
LSESFAAAGSLVVLLAWVYYASQIFLLGAEFTKVYADEHGSLKHGQSASRAAAPVVAAKG

Sequences:

>Translated_300_residues
MLSVRSLFVLARKVVSAYIADYAPSMGAAIAYYSAFSLAPLLVIVIAVAGAVFGRDAIQGQIVAQIGGLIGQEGAILVER
LVRSASDTEKGLVAGLVSGGVLALGATTVFAELQRALDRIWKVPKSERPSGIWALLRARLLSFGLILGLAFLLMVSLIVS
TAIAVFGRWTGALMPGWEVVLQCVNMAISLSITTLLFAMIFKLMPSADVAWRDVWIGAAVTAVLFELGKLLIGLYLGKSA
LSESFAAAGSLVVLLAWVYYASQIFLLGAEFTKVYADEHGSLKHGQSASRAAAPVVAAKG
>Mature_300_residues
MLSVRSLFVLARKVVSAYIADYAPSMGAAIAYYSAFSLAPLLVIVIAVAGAVFGRDAIQGQIVAQIGGLIGQEGAILVER
LVRSASDTEKGLVAGLVSGGVLALGATTVFAELQRALDRIWKVPKSERPSGIWALLRARLLSFGLILGLAFLLMVSLIVS
TAIAVFGRWTGALMPGWEVVLQCVNMAISLSITTLLFAMIFKLMPSADVAWRDVWIGAAVTAVLFELGKLLIGLYLGKSA
LSESFAAAGSLVVLLAWVYYASQIFLLGAEFTKVYADEHGSLKHGQSASRAAAPVVAAKG

Specific function: 3' To 5' Exoribonuclease Necessary For 3'Maturation Of tRNA Molecules. [C]

COG id: COG1295

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0761 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017039
- InterPro:   IPR004664 [H]

Pfam domain/function: PF03631 Ribonuclease_BN [H]

EC number: 3.1.-.- [C]

Molecular weight: Translated: 31575; Mature: 31575

Theoretical pI: Translated: 9.88; Mature: 9.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSVRSLFVLARKVVSAYIADYAPSMGAAIAYYSAFSLAPLLVIVIAVAGAVFGRDAIQG
CCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QIVAQIGGLIGQEGAILVERLVRSASDTEKGLVAGLVSGGVLALGATTVFAELQRALDRI
HHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
WKVPKSERPSGIWALLRARLLSFGLILGLAFLLMVSLIVSTAIAVFGRWTGALMPGWEVV
HCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH
LQCVNMAISLSITTLLFAMIFKLMPSADVAWRDVWIGAAVTAVLFELGKLLIGLYLGKSA
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LSESFAAAGSLVVLLAWVYYASQIFLLGAEFTKVYADEHGSLKHGQSASRAAAPVVAAKG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHCCCCCCCC
>Mature Secondary Structure
MLSVRSLFVLARKVVSAYIADYAPSMGAAIAYYSAFSLAPLLVIVIAVAGAVFGRDAIQG
CCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QIVAQIGGLIGQEGAILVERLVRSASDTEKGLVAGLVSGGVLALGATTVFAELQRALDRI
HHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
WKVPKSERPSGIWALLRARLLSFGLILGLAFLLMVSLIVSTAIAVFGRWTGALMPGWEVV
HCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH
LQCVNMAISLSITTLLFAMIFKLMPSADVAWRDVWIGAAVTAVLFELGKLLIGLYLGKSA
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LSESFAAAGSLVVLLAWVYYASQIFLLGAEFTKVYADEHGSLKHGQSASRAAAPVVAAKG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA