| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is hflK [H]
Identifier: 74316621
GI number: 74316621
Start: 631538
End: 632725
Strand: Direct
Name: hflK [H]
Synonym: Tbd_0603
Alternate gene names: 74316621
Gene position: 631538-632725 (Clockwise)
Preceding gene: 74316620
Following gene: 74316622
Centisome position: 21.7
GC content: 65.57
Gene sequence:
>1188_bases ATGGCCTGGAACGACCCGCAATGGGGCAACAAGGGCAACCGCAACAACAGCGGTCCGCCCGATCTGGACGAGCTTTGGCG GCGCCTGAACCAGCGCCTCGGCGGCATGTTCGGCAACCGCTCGCCGCGCGGAGGCGGGGGCGGCGACGGCCTGCCTTCCA ACATGCCGGGGGGCGGCAACTTCGTCGGACTGCTCATCGGCGCGCTGGTGATGATCTGGATCGCGAGCGGGTTCTACATC GTCGACACCGGCCAGCGCGGCGTCGTCCTCCGCTTCGGCAAGTACGTCGAGACGACCGACCCGGGACCGCGCTGGCATCT GCCGTGGCCGATCGAATCGCGCGAGATGGTCAACGTCGACCAGGTGCGTACGGTCGAGATCGGCTATCGCAACAACGTCC GCAGCAAGGTGCTCAAGGAGTCGCTGATGCTGACCGACGACGAGAACATCATCGATCTGCAGTTCGCGGTGCAGTACATT CTCAAGGACCCGCAGGATTTCCTCTTCATCAACCGCGCCCCCGAAGACACGGTGCTGCAGGTTGCGGAAACCGCGATGCG CGAAATCGTCGGCAAGAACAAGATGGACTACGTGCTGTACGAAGGCCGGGCGGACATCGCCGCGCGCGCCAAGCTGCTGA TGCAGCAGATACTCGACCGCTACAAGACCGGCATCAGCATCAGCCAGGTGACGCTGCAGAACATCCAGCCGCCCGAGCAG GTGCAGGCCGCGTTCGACGACGCCGTCAAAGCGGGCCAGGACCGCGAGCGCCTGAAGAACGAAGCCGAGGCGTATTCGAA CGACGTCGTTCCGCGCGCCCGCGGCCTTGCCTCGCGCCTCAAGGAGGAAGCCGAAGGCTACAAGCTCGCGGTAATCGCCA ACGCCCAGGGTGAGGCGAGCCGCTTCGCGCAGATACTCGACGAATACCAGAAGGCGCCGCAAGTGACGCGCCAGCGGCTC TACCTCGACACCATGCAGACCGTCATGAACAACAGCAGCAAAGTGCTCGTCGACCAGAAGGGCGGCAACAGCCTGTTGTA TCTGCCGCTCGACAAGTTGCAGCAGATTGTCGGCCAGCCCGGCAGTGCGCTGCCCGAAGCCTTGGGATCGCCGACCGCGG CGCCGCCCGCGGCGGCTGCGCGTACGCGCGACAGCCTGGGCGGACGTGACCGGGAGGAGCGGCCATGA
Upstream 100 bases:
>100_bases TTTACGCGATGCCCTGTCAGAAACGCTGCTCGCGGCACGCGAAACGGGTGCATCGGAAACGCCTTCTTCCCCATCCACAG TTCACTCTGCATAACAACAT
Downstream 100 bases:
>100_bases GCAGGAATATTGGTACGCTGCTGATCGCGCTGGTCGTGGCGCTGGTGATCCTGAGCGGAAGCATGTACACGGTCGACCAG CGGCAGAACGCGCTGGTGTT
Product: HflK
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 395; Mature: 394
Protein sequence:
>395_residues MAWNDPQWGNKGNRNNSGPPDLDELWRRLNQRLGGMFGNRSPRGGGGGDGLPSNMPGGGNFVGLLIGALVMIWIASGFYI VDTGQRGVVLRFGKYVETTDPGPRWHLPWPIESREMVNVDQVRTVEIGYRNNVRSKVLKESLMLTDDENIIDLQFAVQYI LKDPQDFLFINRAPEDTVLQVAETAMREIVGKNKMDYVLYEGRADIAARAKLLMQQILDRYKTGISISQVTLQNIQPPEQ VQAAFDDAVKAGQDRERLKNEAEAYSNDVVPRARGLASRLKEEAEGYKLAVIANAQGEASRFAQILDEYQKAPQVTRQRL YLDTMQTVMNNSSKVLVDQKGGNSLLYLPLDKLQQIVGQPGSALPEALGSPTAAPPAAAARTRDSLGGRDREERP
Sequences:
>Translated_395_residues MAWNDPQWGNKGNRNNSGPPDLDELWRRLNQRLGGMFGNRSPRGGGGGDGLPSNMPGGGNFVGLLIGALVMIWIASGFYI VDTGQRGVVLRFGKYVETTDPGPRWHLPWPIESREMVNVDQVRTVEIGYRNNVRSKVLKESLMLTDDENIIDLQFAVQYI LKDPQDFLFINRAPEDTVLQVAETAMREIVGKNKMDYVLYEGRADIAARAKLLMQQILDRYKTGISISQVTLQNIQPPEQ VQAAFDDAVKAGQDRERLKNEAEAYSNDVVPRARGLASRLKEEAEGYKLAVIANAQGEASRFAQILDEYQKAPQVTRQRL YLDTMQTVMNNSSKVLVDQKGGNSLLYLPLDKLQQIVGQPGSALPEALGSPTAAPPAAAARTRDSLGGRDREERP >Mature_394_residues AWNDPQWGNKGNRNNSGPPDLDELWRRLNQRLGGMFGNRSPRGGGGGDGLPSNMPGGGNFVGLLIGALVMIWIASGFYIV DTGQRGVVLRFGKYVETTDPGPRWHLPWPIESREMVNVDQVRTVEIGYRNNVRSKVLKESLMLTDDENIIDLQFAVQYIL KDPQDFLFINRAPEDTVLQVAETAMREIVGKNKMDYVLYEGRADIAARAKLLMQQILDRYKTGISISQVTLQNIQPPEQV QAAFDDAVKAGQDRERLKNEAEAYSNDVVPRARGLASRLKEEAEGYKLAVIANAQGEASRFAQILDEYQKAPQVTRQRLY LDTMQTVMNNSSKVLVDQKGGNSLLYLPLDKLQQIVGQPGSALPEALGSPTAAPPAAAARTRDSLGGRDREERP
Specific function: HflC and HflK could encode or regulate a protease [H]
COG id: COG0330
COG function: function code O; Membrane protease subunits, stomatin/prohibitin homologs
Gene ontology:
Cell location: Membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the band 7/mec-2 family. HflK subfamily [H]
Homologues:
Organism=Escherichia coli, GI1790616, Length=397, Percent_Identity=38.7909319899244, Blast_Score=233, Evalue=1e-62,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001107 - InterPro: IPR010201 - InterPro: IPR020980 - InterPro: IPR001972 [H]
Pfam domain/function: PF01145 Band_7; PF12221 HflK_N [H]
EC number: NA
Molecular weight: Translated: 43793; Mature: 43662
Theoretical pI: Translated: 6.18; Mature: 6.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAWNDPQWGNKGNRNNSGPPDLDELWRRLNQRLGGMFGNRSPRGGGGGDGLPSNMPGGGN CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC FVGLLIGALVMIWIASGFYIVDTGQRGVVLRFGKYVETTDPGPRWHLPWPIESREMVNVD HHHHHHHHHHHHHHHCCCEEEECCCCCEEEEECCEEECCCCCCCCCCCCCCCCCCCCCCC QVRTVEIGYRNNVRSKVLKESLMLTDDENIIDLQFAVQYILKDPQDFLFINRAPEDTVLQ CEEEEEECCCCCHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHCCCCEEEEECCCCHHHHH VAETAMREIVGKNKMDYVLYEGRADIAARAKLLMQQILDRYKTGISISQVTLQNIQPPEQ HHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCHHH VQAAFDDAVKAGQDRERLKNEAEAYSNDVVPRARGLASRLKEEAEGYKLAVIANAQGEAS HHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCEEEEEEECCCCCHH RFAQILDEYQKAPQVTRQRLYLDTMQTVMNNSSKVLVDQKGGNSLLYLPLDKLQQIVGQP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCEEEEECHHHHHHHHCCC GSALPEALGSPTAAPPAAAARTRDSLGGRDREERP CCHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure AWNDPQWGNKGNRNNSGPPDLDELWRRLNQRLGGMFGNRSPRGGGGGDGLPSNMPGGGN CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC FVGLLIGALVMIWIASGFYIVDTGQRGVVLRFGKYVETTDPGPRWHLPWPIESREMVNVD HHHHHHHHHHHHHHHCCCEEEECCCCCEEEEECCEEECCCCCCCCCCCCCCCCCCCCCCC QVRTVEIGYRNNVRSKVLKESLMLTDDENIIDLQFAVQYILKDPQDFLFINRAPEDTVLQ CEEEEEECCCCCHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHCCCCEEEEECCCCHHHHH VAETAMREIVGKNKMDYVLYEGRADIAARAKLLMQQILDRYKTGISISQVTLQNIQPPEQ HHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCHHH VQAAFDDAVKAGQDRERLKNEAEAYSNDVVPRARGLASRLKEEAEGYKLAVIANAQGEAS HHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCEEEEEEECCCCCHH RFAQILDEYQKAPQVTRQRLYLDTMQTVMNNSSKVLVDQKGGNSLLYLPLDKLQQIVGQP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCEEEEECHHHHHHHHCCC GSALPEALGSPTAAPPAAAARTRDSLGGRDREERP CCHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: Hydrolase; Acting on peptide bonds (Peptidases) [C]
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 10952301 [H]