Definition Thiobacillus denitrificans ATCC 25259 chromosome, complete genome.
Accession NC_007404
Length 2,909,809

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The map label for this gene is 74316570

Identifier: 74316570

GI number: 74316570

Start: 579518

End: 581194

Strand: Reverse

Name: 74316570

Synonym: Tbd_0552

Alternate gene names: NA

Gene position: 581194-579518 (Counterclockwise)

Preceding gene: 74316571

Following gene: 74316569

Centisome position: 19.97

GC content: 67.68

Gene sequence:

>1677_bases
ATGAGCTCTTTGGCCACCAGATTTACCGCGCAGCTTTCCCGCCTGGTGCCCACCGGTAAGCGCGCCGACGACCCTCTGAA
CGACCTCAAATCGGCGGCCCGCTGGCTCGACGGCCTGCCGGTCGGCGACGCCTTCAAGTGCCAGGACGCCGTCTGCCGCA
CGCTCAAGCGCTCCAATGAAGACCCCGAGAGCTTCACGCGCGCACGCCTCGAGATATTCATGCTGCTCGACGAACGCTCG
CGCGATCTGCAGGACACGCTCGTGCGCCAGTACCTGCGCAACCCTCGCATGTCGCGGCAGATGGAAAGCCAGCTCTGGCA
CGCGATCTACGGGCTTTCCTGGGAACTCGCGCGCGGTTATCACAGCTTCGTGCTCCACCTTTCGCGCGACCCGGGCGGGC
GCCACGCGGACGTGATCCCGCGCATCACCCTGCGCGCGGTGCGTGCGTTCGGCCAGCTGCTGAAGTGCCGGTCGATGCGT
TACCTCGCGGCCGGCGAAAAGCTGTGGCTACGCCTGCACAATCTCTACCGCATCGCCGAGAGCGGGGGCTTTCAGCGCAG
CGCGCAACGTGCCTATCCCGACGAGAATTCCGACTGCAGCTGCGAGACCGCGTACGTGCACATCCTGATGCTGAATCTCG
CCAACTCGGGAACGCTCTACCCCCGGCAGATCAACATGCTCGACCGCTGGCTCTGCAACTGGCACGGCATGCTTCAGCTC
GAAACGCACCTCGACCCCGATCGCCACACCTTCGTGATCGACCTCGCGGCCGACGAGGGGCCACGCCGGCTGCGCAAACC
TGACCTCGCGAAACCCCTGCGTTTCTGGGAAACGGAGCGTCTGCTGCAGCGCGTGAACGAGATCTTCGGCGACCTGTTGC
GCGGCGGCGCGCCGCGGCAGGCCGGCCTCGGCGACGCGCGTACCGCCGAAAGCCTCGAACTGCTCGACTACCTGCGCCAA
CAGTGGGCTCCGCTCGCCAGGCGCGAGCAGCGGCGAGCGCCGCGCGAAGCGGTCAAGCGGCTGGTCGACGTCGCGCACGG
ACTGAGCACCGTCGTCGCCCAGATCAAGCTCAGCAACGCGCCTGCGCGCGTGTCCCCGTACGGAACCGGGCTCGACTACA
ACGAGGCCGACGACGTGCACGTCTACGGCTTCGTCACCGAGCGCACCCGCGACCGCGCGTCGATCCTGAAAAACCGTGCG
GTCCCCTCCCCCGACGTCGAGCGCTGGGTGATCCACGACGAAAGCGAGTGCGGCCTGGGCGCGCGCGTCGAGTCGCGCGA
CAAGGACTGGCTCCGCGTGGGCGCCCTGATCGGGGTTAGGCCGCACGACCGCGACGACTGGCAGCTCGGCGTCGTCCGCC
GCCTGGCGCGCGAGGGCGACGAAACCAGCTCCGTCGGCATCGAAATCCTGCCGGGCAGGCCGGAATTGACCATGCTTGTC
GACCTGTCGACACCCGCCTATACGGTCAAAGGCGTCGACGATGGCGCGGGCATGCTGCCGCACGCCTGCCTCCGGCTCGA
CACGTCCCCGCCCAGCCTCGTCCTCGATCCGATCCTCTTCGCCCCGGGCAAGATGCTGGAAGTGCACGGTTCCGCCGAGC
GAACACACCTCATCCTCGGCAATCCGATCGACCGCTCCGAAGGCTGGATGCGGGTCGGCATCGACCCCCTGGACTGA

Upstream 100 bases:

>100_bases
GGCCTGGGTGCAAAGCCGGCTGAGCTGAACAAAGAGACTGGCACAAAGCTTGCTGGATAGACCGGTACCTTGATGTGGTC
CCGACCGGATTTGCCTACCC

Downstream 100 bases:

>100_bases
CACAGGCCGGCTTCCCGGCCGGCCGCGCCGCGGATGCCGGCGCCCACGTGCGCCGGTTTCACTTTGATTGCCTCTCTGGC
ACAATCGTCGAAAGTCCGAC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 558; Mature: 557

Protein sequence:

>558_residues
MSSLATRFTAQLSRLVPTGKRADDPLNDLKSAARWLDGLPVGDAFKCQDAVCRTLKRSNEDPESFTRARLEIFMLLDERS
RDLQDTLVRQYLRNPRMSRQMESQLWHAIYGLSWELARGYHSFVLHLSRDPGGRHADVIPRITLRAVRAFGQLLKCRSMR
YLAAGEKLWLRLHNLYRIAESGGFQRSAQRAYPDENSDCSCETAYVHILMLNLANSGTLYPRQINMLDRWLCNWHGMLQL
ETHLDPDRHTFVIDLAADEGPRRLRKPDLAKPLRFWETERLLQRVNEIFGDLLRGGAPRQAGLGDARTAESLELLDYLRQ
QWAPLARREQRRAPREAVKRLVDVAHGLSTVVAQIKLSNAPARVSPYGTGLDYNEADDVHVYGFVTERTRDRASILKNRA
VPSPDVERWVIHDESECGLGARVESRDKDWLRVGALIGVRPHDRDDWQLGVVRRLAREGDETSSVGIEILPGRPELTMLV
DLSTPAYTVKGVDDGAGMLPHACLRLDTSPPSLVLDPILFAPGKMLEVHGSAERTHLILGNPIDRSEGWMRVGIDPLD

Sequences:

>Translated_558_residues
MSSLATRFTAQLSRLVPTGKRADDPLNDLKSAARWLDGLPVGDAFKCQDAVCRTLKRSNEDPESFTRARLEIFMLLDERS
RDLQDTLVRQYLRNPRMSRQMESQLWHAIYGLSWELARGYHSFVLHLSRDPGGRHADVIPRITLRAVRAFGQLLKCRSMR
YLAAGEKLWLRLHNLYRIAESGGFQRSAQRAYPDENSDCSCETAYVHILMLNLANSGTLYPRQINMLDRWLCNWHGMLQL
ETHLDPDRHTFVIDLAADEGPRRLRKPDLAKPLRFWETERLLQRVNEIFGDLLRGGAPRQAGLGDARTAESLELLDYLRQ
QWAPLARREQRRAPREAVKRLVDVAHGLSTVVAQIKLSNAPARVSPYGTGLDYNEADDVHVYGFVTERTRDRASILKNRA
VPSPDVERWVIHDESECGLGARVESRDKDWLRVGALIGVRPHDRDDWQLGVVRRLAREGDETSSVGIEILPGRPELTMLV
DLSTPAYTVKGVDDGAGMLPHACLRLDTSPPSLVLDPILFAPGKMLEVHGSAERTHLILGNPIDRSEGWMRVGIDPLD
>Mature_557_residues
SSLATRFTAQLSRLVPTGKRADDPLNDLKSAARWLDGLPVGDAFKCQDAVCRTLKRSNEDPESFTRARLEIFMLLDERSR
DLQDTLVRQYLRNPRMSRQMESQLWHAIYGLSWELARGYHSFVLHLSRDPGGRHADVIPRITLRAVRAFGQLLKCRSMRY
LAAGEKLWLRLHNLYRIAESGGFQRSAQRAYPDENSDCSCETAYVHILMLNLANSGTLYPRQINMLDRWLCNWHGMLQLE
THLDPDRHTFVIDLAADEGPRRLRKPDLAKPLRFWETERLLQRVNEIFGDLLRGGAPRQAGLGDARTAESLELLDYLRQQ
WAPLARREQRRAPREAVKRLVDVAHGLSTVVAQIKLSNAPARVSPYGTGLDYNEADDVHVYGFVTERTRDRASILKNRAV
PSPDVERWVIHDESECGLGARVESRDKDWLRVGALIGVRPHDRDDWQLGVVRRLAREGDETSSVGIEILPGRPELTMLVD
LSTPAYTVKGVDDGAGMLPHACLRLDTSPPSLVLDPILFAPGKMLEVHGSAERTHLILGNPIDRSEGWMRVGIDPLD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 63223; Mature: 63092

Theoretical pI: Translated: 8.05; Mature: 8.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSLATRFTAQLSRLVPTGKRADDPLNDLKSAARWLDGLPVGDAFKCQDAVCRTLKRSNE
CCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCC
DPESFTRARLEIFMLLDERSRDLQDTLVRQYLRNPRMSRQMESQLWHAIYGLSWELARGY
CHHHHHHHHHHHEEEECCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCHHHHHCC
HSFVLHLSRDPGGRHADVIPRITLRAVRAFGQLLKCRSMRYLAAGEKLWLRLHNLYRIAE
EEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
SGGFQRSAQRAYPDENSDCSCETAYVHILMLNLANSGTLYPRQINMLDRWLCNWHGMLQL
CCCCCHHHHHCCCCCCCCCCHHHHEEEEEEEEECCCCCCCHHHHHHHHHHHHCCCCEEEE
ETHLDPDRHTFVIDLAADEGPRRLRKPDLAKPLRFWETERLLQRVNEIFGDLLRGGAPRQ
EECCCCCCCEEEEEEECCCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
AGLGDARTAESLELLDYLRQQWAPLARREQRRAPREAVKRLVDVAHGLSTVVAQIKLSNA
CCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCC
PARVSPYGTGLDYNEADDVHVYGFVTERTRDRASILKNRAVPSPDVERWVIHDESECGLG
CCCCCCCCCCCCCCCCCCEEEEEEEEHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCC
ARVESRDKDWLRVGALIGVRPHDRDDWQLGVVRRLAREGDETSSVGIEILPGRPELTMLV
CCCCCCCCHHHHHHHEEECCCCCCCCHHHHHHHHHHHCCCCCCCCCEEEECCCCCEEEEE
DLSTPAYTVKGVDDGAGMLPHACLRLDTSPPSLVLDPILFAPGKMLEVHGSAERTHLILG
EECCCCEEEECCCCCCCHHHHHHEEECCCCCCHHHHHHHHCCCCEEEECCCCCCEEEEEC
NPIDRSEGWMRVGIDPLD
CCCCCCCCEEEECCCCCC
>Mature Secondary Structure 
SSLATRFTAQLSRLVPTGKRADDPLNDLKSAARWLDGLPVGDAFKCQDAVCRTLKRSNE
CHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCC
DPESFTRARLEIFMLLDERSRDLQDTLVRQYLRNPRMSRQMESQLWHAIYGLSWELARGY
CHHHHHHHHHHHEEEECCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCHHHHHCC
HSFVLHLSRDPGGRHADVIPRITLRAVRAFGQLLKCRSMRYLAAGEKLWLRLHNLYRIAE
EEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
SGGFQRSAQRAYPDENSDCSCETAYVHILMLNLANSGTLYPRQINMLDRWLCNWHGMLQL
CCCCCHHHHHCCCCCCCCCCHHHHEEEEEEEEECCCCCCCHHHHHHHHHHHHCCCCEEEE
ETHLDPDRHTFVIDLAADEGPRRLRKPDLAKPLRFWETERLLQRVNEIFGDLLRGGAPRQ
EECCCCCCCEEEEEEECCCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
AGLGDARTAESLELLDYLRQQWAPLARREQRRAPREAVKRLVDVAHGLSTVVAQIKLSNA
CCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCC
PARVSPYGTGLDYNEADDVHVYGFVTERTRDRASILKNRAVPSPDVERWVIHDESECGLG
CCCCCCCCCCCCCCCCCCEEEEEEEEHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCC
ARVESRDKDWLRVGALIGVRPHDRDDWQLGVVRRLAREGDETSSVGIEILPGRPELTMLV
CCCCCCCCHHHHHHHEEECCCCCCCCHHHHHHHHHHHCCCCCCCCCEEEECCCCCEEEEE
DLSTPAYTVKGVDDGAGMLPHACLRLDTSPPSLVLDPILFAPGKMLEVHGSAERTHLILG
EECCCCEEEECCCCCCCHHHHHHEEECCCCCCHHHHHHHHCCCCEEEECCCCCCEEEEEC
NPIDRSEGWMRVGIDPLD
CCCCCCCCEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA