Definition Thiobacillus denitrificans ATCC 25259 chromosome, complete genome.
Accession NC_007404
Length 2,909,809

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The map label for this gene is 74316227

Identifier: 74316227

GI number: 74316227

Start: 228660

End: 229619

Strand: Direct

Name: 74316227

Synonym: Tbd_0209

Alternate gene names: NA

Gene position: 228660-229619 (Clockwise)

Preceding gene: 74316226

Following gene: 74316228

Centisome position: 7.86

GC content: 66.98

Gene sequence:

>960_bases
ATGTCCCTTATTGACGTTTTCAACGGCGATGCCGACGGCATCTGCGCGCTTCACCAACTGCGCCTCGAGCAACCGGGCCA
ATCCGAGCTCGTGACCGGCCCCAAGCGCGATATCAGTCTGCTCAAGCGCGTGACCGCAGACACGGGCGACCAGATCACCG
TGCTCGATATCGCGCTGTCGAAGAATCGCGAAGCGCTCGACCGGCTGCTCGCCGTCGGGGCCCGCGTGCGCTACTTCGAC
CATCACCAGCCGGGTGACGACCTGCCTCGCCATCCCGGCTTCGAACCGCACATCGACACCGACGCCAACGTCTGCACGAG
CCTCCTGGTCAATGCGTACTTGCACGGCCGACGCCTGCCCTGGGCGGTGGTGGCCGCGTTCGGCGACAACCTGGCGGACG
CGGCACGGCAGGCAGCCGCGCCGCTCGGGCTGGGCGAGGCGCAGTTGCAAAGCCTGCAGTCGCTTGGTGAGTGCCTCAAT
TACAACGGTTACGGCGAGACGCTCGACGACCTCTTTTTCGACCCCGCCGACCTCTACCGCCAGCTGCGGCCCTTCGACGA
CCCTTTGGCCTTCGTCGCCGAATCGACCGCCTACCGGACGCTGAGGACGGGCTTCGACAGCGACATGGCGCAGGCGCGCG
CGGTGGGCGCCGCCGAGGACCGCGCGGCGGGGCGCATCTTCATGCTGCCGGCCGAGAAATGGGCACGACGCATTTCCGGC
GTCTTCGGCAACGCGCTCGCCACCGCGTCGCCCCGACAGGCCCACGCCGTGCTCACGGCCAAGCCAGGCGGCGGCTACGT
CGTCAGCGTGCGCGCGCCGCTTGCGAACAAGACCGGCGCCGACCAGTTGTGTAGCCAGTTCGAGACCGGCGGCGGGCGTA
AAGGCGCGGCCGGCATCAACCACCTTCCCGAGTCGGAACTCGACCGATTCATTGCTGTTTTTTTCCAGATTTACAACTAG

Upstream 100 bases:

>100_bases
TTGCGCTATGCGGGCGTGCATGTGCTTGTCATCGCCGGGCTTGCGTTCATACAATGGCCGCACTTCAGAACCGCCCGACG
AACTCACGCCCAAGGCTCCG

Downstream 100 bases:

>100_bases
CTCGTGCGCCTCCTCCCCACGAGCGTGCGCCCTATTCCATCGGACCTTGGAGCAGCATGGTGAATCAACTGATCGAGCCC
TACGGCGGCACCCTCGTCAA

Product: hypothetical protein

Products: NA

Alternate protein names: DHHA1 Domain Protein

Number of amino acids: Translated: 319; Mature: 318

Protein sequence:

>319_residues
MSLIDVFNGDADGICALHQLRLEQPGQSELVTGPKRDISLLKRVTADTGDQITVLDIALSKNREALDRLLAVGARVRYFD
HHQPGDDLPRHPGFEPHIDTDANVCTSLLVNAYLHGRRLPWAVVAAFGDNLADAARQAAAPLGLGEAQLQSLQSLGECLN
YNGYGETLDDLFFDPADLYRQLRPFDDPLAFVAESTAYRTLRTGFDSDMAQARAVGAAEDRAAGRIFMLPAEKWARRISG
VFGNALATASPRQAHAVLTAKPGGGYVVSVRAPLANKTGADQLCSQFETGGGRKGAAGINHLPESELDRFIAVFFQIYN

Sequences:

>Translated_319_residues
MSLIDVFNGDADGICALHQLRLEQPGQSELVTGPKRDISLLKRVTADTGDQITVLDIALSKNREALDRLLAVGARVRYFD
HHQPGDDLPRHPGFEPHIDTDANVCTSLLVNAYLHGRRLPWAVVAAFGDNLADAARQAAAPLGLGEAQLQSLQSLGECLN
YNGYGETLDDLFFDPADLYRQLRPFDDPLAFVAESTAYRTLRTGFDSDMAQARAVGAAEDRAAGRIFMLPAEKWARRISG
VFGNALATASPRQAHAVLTAKPGGGYVVSVRAPLANKTGADQLCSQFETGGGRKGAAGINHLPESELDRFIAVFFQIYN
>Mature_318_residues
SLIDVFNGDADGICALHQLRLEQPGQSELVTGPKRDISLLKRVTADTGDQITVLDIALSKNREALDRLLAVGARVRYFDH
HQPGDDLPRHPGFEPHIDTDANVCTSLLVNAYLHGRRLPWAVVAAFGDNLADAARQAAAPLGLGEAQLQSLQSLGECLNY
NGYGETLDDLFFDPADLYRQLRPFDDPLAFVAESTAYRTLRTGFDSDMAQARAVGAAEDRAAGRIFMLPAEKWARRISGV
FGNALATASPRQAHAVLTAKPGGGYVVSVRAPLANKTGADQLCSQFETGGGRKGAAGINHLPESELDRFIAVFFQIYN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34487; Mature: 34356

Theoretical pI: Translated: 5.60; Mature: 5.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLIDVFNGDADGICALHQLRLEQPGQSELVTGPKRDISLLKRVTADTGDQITVLDIALS
CCCEECCCCCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEEEEHH
KNREALDRLLAVGARVRYFDHHQPGDDLPRHPGFEPHIDTDANVCTSLLVNAYLHGRRLP
CCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCC
WAVVAAFGDNLADAARQAAAPLGLGEAQLQSLQSLGECLNYNGYGETLDDLFFDPADLYR
HHHHHHHCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHCCCHHHHHH
QLRPFDDPLAFVAESTAYRTLRTGFDSDMAQARAVGAAEDRAAGRIFMLPAEKWARRISG
HHCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCEEEEECHHHHHHHHHH
VFGNALATASPRQAHAVLTAKPGGGYVVSVRAPLANKTGADQLCSQFETGGGRKGAAGIN
HHHHHHHCCCCCCCEEEEEECCCCCEEEEEECCCCCCCCHHHHHHHHHCCCCCCCCCCCC
HLPESELDRFIAVFFQIYN
CCCHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SLIDVFNGDADGICALHQLRLEQPGQSELVTGPKRDISLLKRVTADTGDQITVLDIALS
CCEECCCCCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEEEEHH
KNREALDRLLAVGARVRYFDHHQPGDDLPRHPGFEPHIDTDANVCTSLLVNAYLHGRRLP
CCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCC
WAVVAAFGDNLADAARQAAAPLGLGEAQLQSLQSLGECLNYNGYGETLDDLFFDPADLYR
HHHHHHHCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHCCCHHHHHH
QLRPFDDPLAFVAESTAYRTLRTGFDSDMAQARAVGAAEDRAAGRIFMLPAEKWARRISG
HHCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCEEEEECHHHHHHHHHH
VFGNALATASPRQAHAVLTAKPGGGYVVSVRAPLANKTGADQLCSQFETGGGRKGAAGIN
HHHHHHHCCCCCCCEEEEEECCCCCEEEEEECCCCCCCCHHHHHHHHHCCCCCCCCCCCC
HLPESELDRFIAVFFQIYN
CCCHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA