| Definition | Ralstonia eutropha JMP134 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007347 |
| Length | 3,806,533 |
Click here to switch to the map view.
The map label for this gene is hflX [H]
Identifier: 73541768
GI number: 73541768
Start: 2286917
End: 2288161
Strand: Reverse
Name: hflX [H]
Synonym: Reut_A2080
Alternate gene names: 73541768
Gene position: 2288161-2286917 (Counterclockwise)
Preceding gene: 73541769
Following gene: 73541767
Centisome position: 60.11
GC content: 64.98
Gene sequence:
>1245_bases TTGGATCCCAGAGCTACCTCCAACACCGAACCGTCGCGTGCCATTCTCGTTGGCGTGGATTTCGGCAAGCACGATTTCCA GGAAAGCCTGAGCGAGCTTGCCTTGCTGACCACCACTGCCGGCTCCATGCCGGTGCATACGCTGACCGGCAAACGTTCGC GCCCGGACCCGGCGCTGTTCATCGGCTCGGGCAAGGCCGAAGAGCTGCGGGAAGCGGCGGACGCGCTGGATGCCGATATC GTGGTGTTCAACCATGCCCTGAGCCCGGCACAGCAACGTAACCTCGAACGCTTCTTGCAGCGCCATGTGATTGACCGTAC CGGCCTGATCCTGGACATCTTCGCGCAGCGTGCCCAGAGCCACGTGGGCAAGGTGCAGGTGGAGCTGGCGCAGGTTCAAT ACCAGGCGTCGCGGCTCGTCCGTGCGTGGAGCCACCTGGAGCGGCAGAAGGGCGGTATCGGCATGCGGGGCGGCCCGGGC GAACGCCAGCTCGAACTGGACCGACGCATGCTGGATGACCGGGCCAAGCGGCTGAAGTCCGACCTTGCCCGGCTGCAGCG GCAGCACCGCACGCAGCGGCGCGCCCGCGCGCGCAACGACACCTTGAGCATTTCGCTGGTGGGCTATACCAATGCGGGCA AGTCGACGCTGTTCAATGCGTTGACCAAGGCCGGCGCGTACGCGGCCAACCAGCTTTTCGCGACGCTTGATACGACCTCG CGCCGGATGTTCCTGGACGGGCTTGGCAATGTGGTGCTGTCGGACACGGTCGGCTTCATCCGTGACCTGCCGACGCAACT GGTCGAGGCGTTCCGCGCAACGCTGGACGAAACTGTGCATGCCGACCTGCTGTTGCATGTCGTCGATGCGTCTAGCCCCG TGCGGCATGAGCAGATCGAACAGGTCAACCGTGTGCTGGCGGAAATCGAAGCGTCCGGCATCCCGCAGATCATCGTGATG AACAAGATCGATGCTGCGCCGGAACTGCTCGAGCAGGGCGTGCGTGTGGAGCGTGACGAGGAGGGCGTTCCGACGCGGGT GTTCCTCAGTGCGCGCGAGGGCATTGGCCTGGATGCGTTGCGGCAGTCGATCGTCGAGGTCGCGCAATGGCTTGCGAGCC GTCCGCCCGAGCCGGCACCGTTTGATCCACGGCTGGCGGAGCAGGGGCCGCGCTTGGACGACGAGGAGTTTGAATGGGAT GAGCGCGAGGGTCACGATGATCGCGAAGATCGCCGCCCGTCCTGA
Upstream 100 bases:
>100_bases CCGCTCCCGTCCCGCTGAACCGGGACACGTCCGGCCTTCCGTCCGGCTCATATCCGGACATCTCCCCAAACCGTCTCACT TCGCGCGTAGCGCCCCCCGC
Downstream 100 bases:
>100_bases TCCTTTTCGGCGAGATTCGCGGCCGGATTACGCGCATTGGCCAAAAGTGGCGCAGATGACTGCTAGAATCCCCCTGTTAC AAACTTCCCGGACCCGTGCA
Product: small GTP-binding protein domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 414; Mature: 414
Protein sequence:
>414_residues MDPRATSNTEPSRAILVGVDFGKHDFQESLSELALLTTTAGSMPVHTLTGKRSRPDPALFIGSGKAEELREAADALDADI VVFNHALSPAQQRNLERFLQRHVIDRTGLILDIFAQRAQSHVGKVQVELAQVQYQASRLVRAWSHLERQKGGIGMRGGPG ERQLELDRRMLDDRAKRLKSDLARLQRQHRTQRRARARNDTLSISLVGYTNAGKSTLFNALTKAGAYAANQLFATLDTTS RRMFLDGLGNVVLSDTVGFIRDLPTQLVEAFRATLDETVHADLLLHVVDASSPVRHEQIEQVNRVLAEIEASGIPQIIVM NKIDAAPELLEQGVRVERDEEGVPTRVFLSAREGIGLDALRQSIVEVAQWLASRPPEPAPFDPRLAEQGPRLDDEEFEWD EREGHDDREDRRPS
Sequences:
>Translated_414_residues MDPRATSNTEPSRAILVGVDFGKHDFQESLSELALLTTTAGSMPVHTLTGKRSRPDPALFIGSGKAEELREAADALDADI VVFNHALSPAQQRNLERFLQRHVIDRTGLILDIFAQRAQSHVGKVQVELAQVQYQASRLVRAWSHLERQKGGIGMRGGPG ERQLELDRRMLDDRAKRLKSDLARLQRQHRTQRRARARNDTLSISLVGYTNAGKSTLFNALTKAGAYAANQLFATLDTTS RRMFLDGLGNVVLSDTVGFIRDLPTQLVEAFRATLDETVHADLLLHVVDASSPVRHEQIEQVNRVLAEIEASGIPQIIVM NKIDAAPELLEQGVRVERDEEGVPTRVFLSAREGIGLDALRQSIVEVAQWLASRPPEPAPFDPRLAEQGPRLDDEEFEWD EREGHDDREDRRPS >Mature_414_residues MDPRATSNTEPSRAILVGVDFGKHDFQESLSELALLTTTAGSMPVHTLTGKRSRPDPALFIGSGKAEELREAADALDADI VVFNHALSPAQQRNLERFLQRHVIDRTGLILDIFAQRAQSHVGKVQVELAQVQYQASRLVRAWSHLERQKGGIGMRGGPG ERQLELDRRMLDDRAKRLKSDLARLQRQHRTQRRARARNDTLSISLVGYTNAGKSTLFNALTKAGAYAANQLFATLDTTS RRMFLDGLGNVVLSDTVGFIRDLPTQLVEAFRATLDETVHADLLLHVVDASSPVRHEQIEQVNRVLAEIEASGIPQIIVM NKIDAAPELLEQGVRVERDEEGVPTRVFLSAREGIGLDALRQSIVEVAQWLASRPPEPAPFDPRLAEQGPRLDDEEFEWD EREGHDDREDRRPS
Specific function: Unknown
COG id: COG2262
COG function: function code R; GTPases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 G (guanine nucleotide-binding) domain [H]
Homologues:
Organism=Homo sapiens, GI310133118, Length=202, Percent_Identity=38.1188118811881, Blast_Score=115, Evalue=5e-26, Organism=Homo sapiens, GI310133116, Length=198, Percent_Identity=38.3838383838384, Blast_Score=113, Evalue=3e-25, Organism=Homo sapiens, GI310124269, Length=177, Percent_Identity=38.9830508474576, Blast_Score=113, Evalue=4e-25, Organism=Homo sapiens, GI310124267, Length=177, Percent_Identity=38.9830508474576, Blast_Score=113, Evalue=4e-25, Organism=Homo sapiens, GI310124171, Length=177, Percent_Identity=38.9830508474576, Blast_Score=113, Evalue=4e-25, Organism=Homo sapiens, GI310124169, Length=177, Percent_Identity=38.9830508474576, Blast_Score=113, Evalue=4e-25, Organism=Escherichia coli, GI1790615, Length=406, Percent_Identity=51.2315270935961, Blast_Score=370, Evalue=1e-104, Organism=Caenorhabditis elegans, GI17561038, Length=321, Percent_Identity=28.9719626168224, Blast_Score=115, Evalue=3e-26, Organism=Drosophila melanogaster, GI24650079, Length=321, Percent_Identity=34.2679127725857, Blast_Score=121, Evalue=8e-28,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009022 - InterPro: IPR016496 - InterPro: IPR006073 - InterPro: IPR002917 [H]
Pfam domain/function: PF01926 MMR_HSR1 [H]
EC number: NA
Molecular weight: Translated: 46194; Mature: 46194
Theoretical pI: Translated: 6.00; Mature: 6.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDPRATSNTEPSRAILVGVDFGKHDFQESLSELALLTTTAGSMPVHTLTGKRSRPDPALF CCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCCCEEE IGSGKAEELREAADALDADIVVFNHALSPAQQRNLERFLQRHVIDRTGLILDIFAQRAQS ECCCCHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH HVGKVQVELAQVQYQASRLVRAWSHLERQKGGIGMRGGPGERQLELDRRMLDDRAKRLKS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH DLARLQRQHRTQRRARARNDTLSISLVGYTNAGKSTLFNALTKAGAYAANQLFATLDTTS HHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCH RRMFLDGLGNVVLSDTVGFIRDLPTQLVEAFRATLDETVHADLLLHVVDASSPVRHEQIE HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH QVNRVLAEIEASGIPQIIVMNKIDAAPELLEQGVRVERDEEGVPTRVFLSAREGIGLDAL HHHHHHHHHHHCCCCEEEEECCCCCCHHHHHCCCCCCCCCCCCCCEEEEECCCCCCHHHH RQSIVEVAQWLASRPPEPAPFDPRLAEQGPRLDDEEFEWDEREGHDDREDRRPS HHHHHHHHHHHHCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MDPRATSNTEPSRAILVGVDFGKHDFQESLSELALLTTTAGSMPVHTLTGKRSRPDPALF CCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCCCEEE IGSGKAEELREAADALDADIVVFNHALSPAQQRNLERFLQRHVIDRTGLILDIFAQRAQS ECCCCHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH HVGKVQVELAQVQYQASRLVRAWSHLERQKGGIGMRGGPGERQLELDRRMLDDRAKRLKS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH DLARLQRQHRTQRRARARNDTLSISLVGYTNAGKSTLFNALTKAGAYAANQLFATLDTTS HHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCH RRMFLDGLGNVVLSDTVGFIRDLPTQLVEAFRATLDETVHADLLLHVVDASSPVRHEQIE HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH QVNRVLAEIEASGIPQIIVMNKIDAAPELLEQGVRVERDEEGVPTRVFLSAREGIGLDAL HHHHHHHHHHHCCCCEEEEECCCCCCHHHHHCCCCCCCCCCCCCCEEEEECCCCCCHHHH RQSIVEVAQWLASRPPEPAPFDPRLAEQGPRLDDEEFEWDEREGHDDREDRRPS HHHHHHHHHHHHCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8248183; 7610040; 9278503; 2020545; 3040675 [H]