| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
Click here to switch to the map view.
The map label for this gene is mocC [H]
Identifier: 66046502
GI number: 66046502
Start: 3919748
End: 3920653
Strand: Reverse
Name: mocC [H]
Synonym: Psyr_3273
Alternate gene names: 66046502
Gene position: 3920653-3919748 (Counterclockwise)
Preceding gene: 66046503
Following gene: 66046501
Centisome position: 64.34
GC content: 60.49
Gene sequence:
>906_bases ATGCCCGTTTCGACTTCCACACCCAGAATCCGCATCGGCATCAATCCGATCTCCTGGAGCAACGATGATTTGCCGGCCCT TGGCGGAGAAACCCCGTTGAGCACGGCGCTCAGCGAAGGCAAAGCCATTGGTTACGAGGGCTTCGAGCTCAACGGCAAGT TTCCGAAAGATGCCAAGGGTGTCGGCGATGTATTGCGGCCCCATGATCTGGCGTTGGTGTCCGGCTGGTACTCCAGCCGT CTGGCGCGGCGTTCGGTGGCCGAGGAAATCGAAGCCATCACCCCACATGTGCAGCTGCTCGCCGAAAATGGCGCTTCGGT GCTGGTGTATGGCGAAGTGGCCGACTCGATTCAGGGGCAGCGTATCCCGCTGGTCGAACGACCGCGTTTTCACACCGATG CCGCCTGGCATGAGTACGCCGAAAAACTCACCGAGCTGGCACGTTTTACCCTGTCCCGCGGCGTGCGTCTGGCGTATCAC CACCACATGGGCGCTTATGTCGAGTCGCCGCAGGATATCGACCGGCTGATGGCACTGACCGGTGAGGAAGTCGGCCTGCT GTTCGATTCCGGGCATTGCTACATGGGCGGTGGCGAACCTCTTCAGGTGTTGAGCAAGCACATCCAGCGTATCTGTCATG TGCATTTCAAGGACGTGCGCAAGCCGGTGGTGCAACTGGCGCGCAACAATCTGTGGAGCTTTCCCGACTGCATCATCAAC GGCACCTTCACGGTGCCGGGCGATGGCGACATCGACTTCTCGGCGCTGCTCAAGGTGTTGCTGCAGGCCGATTACCGCGG CTGGCTGGTGGTCGAGGCCGAACAGGACCCAGCGGTAGCGCCGAGCTATGTGTACGCCAAAAAGGGCTATGACACGTTGC GCCAACTGCTGGCCGATGCACGCTAA
Upstream 100 bases:
>100_bases TTCAACTGGTTGATCGAGTCCTGGCGCGAAAGCCGCGCCTGATTGGTTCCGGATTTCGACGCCACAACAACGTCGCGATA ACAACAAAAAAGGTGCAGCC
Downstream 100 bases:
>100_bases GGAGGAATGAAACATGAATCTGCTGACCAAGAGCAAATCCACTGGCCGCGACGTCGTAGCGCTGGCCCCCGGTTCGCTGG AATACGTGAACTTCGCCGCC
Product: AP endonuclease
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 301; Mature: 300
Protein sequence:
>301_residues MPVSTSTPRIRIGINPISWSNDDLPALGGETPLSTALSEGKAIGYEGFELNGKFPKDAKGVGDVLRPHDLALVSGWYSSR LARRSVAEEIEAITPHVQLLAENGASVLVYGEVADSIQGQRIPLVERPRFHTDAAWHEYAEKLTELARFTLSRGVRLAYH HHMGAYVESPQDIDRLMALTGEEVGLLFDSGHCYMGGGEPLQVLSKHIQRICHVHFKDVRKPVVQLARNNLWSFPDCIIN GTFTVPGDGDIDFSALLKVLLQADYRGWLVVEAEQDPAVAPSYVYAKKGYDTLRQLLADAR
Sequences:
>Translated_301_residues MPVSTSTPRIRIGINPISWSNDDLPALGGETPLSTALSEGKAIGYEGFELNGKFPKDAKGVGDVLRPHDLALVSGWYSSR LARRSVAEEIEAITPHVQLLAENGASVLVYGEVADSIQGQRIPLVERPRFHTDAAWHEYAEKLTELARFTLSRGVRLAYH HHMGAYVESPQDIDRLMALTGEEVGLLFDSGHCYMGGGEPLQVLSKHIQRICHVHFKDVRKPVVQLARNNLWSFPDCIIN GTFTVPGDGDIDFSALLKVLLQADYRGWLVVEAEQDPAVAPSYVYAKKGYDTLRQLLADAR >Mature_300_residues PVSTSTPRIRIGINPISWSNDDLPALGGETPLSTALSEGKAIGYEGFELNGKFPKDAKGVGDVLRPHDLALVSGWYSSRL ARRSVAEEIEAITPHVQLLAENGASVLVYGEVADSIQGQRIPLVERPRFHTDAAWHEYAEKLTELARFTLSRGVRLAYHH HMGAYVESPQDIDRLMALTGEEVGLLFDSGHCYMGGGEPLQVLSKHIQRICHVHFKDVRKPVVQLARNNLWSFPDCIING TFTVPGDGDIDFSALLKVLLQADYRGWLVVEAEQDPAVAPSYVYAKKGYDTLRQLLADAR
Specific function: Involved in rhizopine (L-3-O-methyl-scyllo-inosamine) catabolism [H]
COG id: COG1082
COG function: function code G; Sugar phosphate isomerases/epimerases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the iolE/mocC family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013022 - InterPro: IPR012307 [H]
Pfam domain/function: PF01261 AP_endonuc_2 [H]
EC number: NA
Molecular weight: Translated: 33241; Mature: 33110
Theoretical pI: Translated: 6.13; Mature: 6.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPVSTSTPRIRIGINPISWSNDDLPALGGETPLSTALSEGKAIGYEGFELNGKFPKDAKG CCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCHHHHHHCCCEECCCCEEECCCCCCCCCC VGDVLRPHDLALVSGWYSSRLARRSVAEEIEAITPHVQLLAENGASVLVYGEVADSIQGQ HHHHCCCCHHHEEHHHHHHHHHHHHHHHHHHHHCHHHHHHCCCCCEEEEECCHHHCCCCC RIPLVERPRFHTDAAWHEYAEKLTELARFTLSRGVRLAYHHHMGAYVESPQDIDRLMALT CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEHHCCCCCCCHHHHHHHHHHC GEEVGLLFDSGHCYMGGGEPLQVLSKHIQRICHVHFKDVRKPVVQLARNNLWSFPDCIIN CCCEEEEEECCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHEE GTFTVPGDGDIDFSALLKVLLQADYRGWLVVEAEQDPAVAPSYVYAKKGYDTLRQLLADA CCEECCCCCCCCHHHHHHHHHHCCCCCEEEEECCCCCCCCCCHHHHHCCHHHHHHHHHCC R C >Mature Secondary Structure PVSTSTPRIRIGINPISWSNDDLPALGGETPLSTALSEGKAIGYEGFELNGKFPKDAKG CCCCCCCEEEEECCCCCCCCCCCCCCCCCCCHHHHHHCCCEECCCCEEECCCCCCCCCC VGDVLRPHDLALVSGWYSSRLARRSVAEEIEAITPHVQLLAENGASVLVYGEVADSIQGQ HHHHCCCCHHHEEHHHHHHHHHHHHHHHHHHHHCHHHHHHCCCCCEEEEECCHHHCCCCC RIPLVERPRFHTDAAWHEYAEKLTELARFTLSRGVRLAYHHHMGAYVESPQDIDRLMALT CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEHHCCCCCCCHHHHHHHHHHC GEEVGLLFDSGHCYMGGGEPLQVLSKHIQRICHVHFKDVRKPVVQLARNNLWSFPDCIIN CCCEEEEEECCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHEE GTFTVPGDGDIDFSALLKVLLQADYRGWLVVEAEQDPAVAPSYVYAKKGYDTLRQLLADA CCEECCCCCCCCHHHHHHHHHHCCCCCEEEEECCCCCCCCCCHHHHHCCHHHHHHHHHCC R C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7845353 [H]