Definition Pseudomonas syringae pv. syringae B728a, complete genome.
Accession NC_007005
Length 6,093,698

Click here to switch to the map view.

The map label for this gene is ypeB [C]

Identifier: 66044374

GI number: 66044374

Start: 1272250

End: 1272489

Strand: Reverse

Name: ypeB [C]

Synonym: Psyr_1123

Alternate gene names: 66044374

Gene position: 1272489-1272250 (Counterclockwise)

Preceding gene: 66044376

Following gene: 66044370

Centisome position: 20.88

GC content: 55.83

Gene sequence:

>240_bases
ATGAACCCGGAAAAACTCAAGTTGCTGGTGACACAGGAAATGCCGTTCGGCAAATACAAGGGCCGGCTGATCGCTGATTT
ACCAGGGCATTACCTGAACTGGTTCGCCCGCGAAGGCTTTCCCAAAGGAGAGTTGGGCGGCTTGTTGGCGCTGATGCAGG
AAATCGATCACAACGGCCTTGGCGCGCTATTGGACCCGTTGCGCACGCGTCCACGTCAGTCGTTCAAGGACAAGGGGTAA

Upstream 100 bases:

>100_bases
CACATTTGCCCGTTCGTGACTTCTGCATGATCTGCGGTTTGGCCTGCATGCAGAATGCACGTATCGTACAAGCTGAGACA
GAAACGCAGGCTTATCGCGA

Downstream 100 bases:

>100_bases
AAACGAAGAGAAGGTCCGGGGAGAAAAAAACGGTGCTCCGGACCAGGGAGCACCGAAAAGCCATACAACCAACAACAACT
TCCTTGTCGGAATCAGCCGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 79; Mature: 79

Protein sequence:

>79_residues
MNPEKLKLLVTQEMPFGKYKGRLIADLPGHYLNWFAREGFPKGELGGLLALMQEIDHNGLGALLDPLRTRPRQSFKDKG

Sequences:

>Translated_79_residues
MNPEKLKLLVTQEMPFGKYKGRLIADLPGHYLNWFAREGFPKGELGGLLALMQEIDHNGLGALLDPLRTRPRQSFKDKG
>Mature_79_residues
MNPEKLKLLVTQEMPFGKYKGRLIADLPGHYLNWFAREGFPKGELGGLLALMQEIDHNGLGALLDPLRTRPRQSFKDKG

Specific function: Unknown

COG id: COG3530

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87082098, Length=72, Percent_Identity=48.6111111111111, Blast_Score=61, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 8935; Mature: 8935

Theoretical pI: Translated: 10.05; Mature: 10.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNPEKLKLLVTQEMPFGKYKGRLIADLPGHYLNWFAREGFPKGELGGLLALMQEIDHNGL
CCCCCEEEEECCCCCCCCCCCEEEECCCCHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCC
GALLDPLRTRPRQSFKDKG
HHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MNPEKLKLLVTQEMPFGKYKGRLIADLPGHYLNWFAREGFPKGELGGLLALMQEIDHNGL
CCCCCEEEEECCCCCCCCCCCEEEECCCCHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCC
GALLDPLRTRPRQSFKDKG
HHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA