| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is nemA [C]
Identifier: 66044264
GI number: 66044264
Start: 1145082
End: 1146185
Strand: Direct
Name: nemA [C]
Synonym: Psyr_1011
Alternate gene names: 66044264
Gene position: 1145082-1146185 (Clockwise)
Preceding gene: 66044263
Following gene: 66044269
Centisome position: 18.79
GC content: 62.68
Gene sequence:
>1104_bases ATGTCGGCAGAAGCCTTGTTCACGCCTTTCCGTCTGGGCAGCCTGGAGCTGTCCTCGCGTGTGGTCATGGCCCCCATGAC CCGCTCGTTCTCGCCAGGGCACGTGCCCAACTCGAAGGTCGTCGAGTACTACCGGCGGCGCGCTGCTGCAGGCGTCGGGC TGATTATCACCGAAGGTACGACGGTCAATCACAAGGCCTCCAACGGTTATCCGAACGTCCCGCAGTTTTTCGGCGAAGCG CCGCTGGCCGGCTGGCGCAAGGTGGTCGAGGCGGTGCATGCGGAGGGCGGCAAGATTGTTCCGCAACTCTGGCACGTCGG CGCAGTTCGCCGTCCTGGCACCGAGCCGGACGGCAGCGTGCCTGCCTACGGGCCGATGGAGAAGGTCAAGGACGGTCAGG TGCTGGTGCATGGCATGAGCAAGCAGGACATCGACGAGGTCGTAGCGGCCTTTGCCCAGGCTGCCGCCGATGCCAGGGCG ATTGGCATGGACGGTGTCGAAATTCATGGGGCTCACGGTTACCTGGTCGATCAGTTCTTTTGGGAGGGCAGCAATCAGCG TAGCGACGAGTACGGCGGCAGCCTCGCCAACCGCTCACGGTTTGCCCTCGAACTGATCAAGGCCGTGCGCGGCGCAGTAG GCCCGGACTACCCGATCATTTTCCGTTTCTCACAATGGAAACAGCAGGATTACACCGCGCGCCTGGTGCAAACGCCCGAG GCGCTGGGCGAGTTCCTGCAGCCTCTGGCTGATGCAGGTGTGGATATCTTTCATTGCTCTACCCGGCGTTTCTGGGAGCC TGAGTTTGAAGGCTCCGACCTGAACCTGGCGGGCTGGACGCGCAAGCTGACCGGCAAACCGACCATTACTGTCGGCAGCG TCGGACTGGACGGCGAGTTCCTGCAATTCATGGTCAACACCGACAAGGTCGCTCAACCGGCCAGCCTGGAAAATCTGCTG AAGCGACTGGGCAACGACGAGTTCGATCTGGTGGCGGTGGGGCGCGCGCTGCTGGTCGATCCTGATTGGGCACTGAAAGT GCGCGAGGGGCGCGAGCAGGATATCCTGCCCTTCAGTCGAGACGCACTGACGACACTGGTCTGA
Upstream 100 bases:
>100_bases CTGAACTCAAATCAGCCAGATCAATAGTACTGGGCCGCCGCTGACGCCCGGCGATATTCTGCGCGCCTGATGGCAATCGA CCATTTCACAGGAGTTGCGC
Downstream 100 bases:
>100_bases TTTTCTTGCTGGCTACCGACCTGATCTCTTTGACGCTTGCAGCGTTCTGGCTCGGGCAGGCCTCGCGCAATTGACGCTCG AACTGATCGATGACCGCTGT
Product: NADH:flavin oxidoreductase/NADH oxidase
Products: NADP; Cytotoxic compound [C]
Alternate protein names: NA
Number of amino acids: Translated: 367; Mature: 366
Protein sequence:
>367_residues MSAEALFTPFRLGSLELSSRVVMAPMTRSFSPGHVPNSKVVEYYRRRAAAGVGLIITEGTTVNHKASNGYPNVPQFFGEA PLAGWRKVVEAVHAEGGKIVPQLWHVGAVRRPGTEPDGSVPAYGPMEKVKDGQVLVHGMSKQDIDEVVAAFAQAAADARA IGMDGVEIHGAHGYLVDQFFWEGSNQRSDEYGGSLANRSRFALELIKAVRGAVGPDYPIIFRFSQWKQQDYTARLVQTPE ALGEFLQPLADAGVDIFHCSTRRFWEPEFEGSDLNLAGWTRKLTGKPTITVGSVGLDGEFLQFMVNTDKVAQPASLENLL KRLGNDEFDLVAVGRALLVDPDWALKVREGREQDILPFSRDALTTLV
Sequences:
>Translated_367_residues MSAEALFTPFRLGSLELSSRVVMAPMTRSFSPGHVPNSKVVEYYRRRAAAGVGLIITEGTTVNHKASNGYPNVPQFFGEA PLAGWRKVVEAVHAEGGKIVPQLWHVGAVRRPGTEPDGSVPAYGPMEKVKDGQVLVHGMSKQDIDEVVAAFAQAAADARA IGMDGVEIHGAHGYLVDQFFWEGSNQRSDEYGGSLANRSRFALELIKAVRGAVGPDYPIIFRFSQWKQQDYTARLVQTPE ALGEFLQPLADAGVDIFHCSTRRFWEPEFEGSDLNLAGWTRKLTGKPTITVGSVGLDGEFLQFMVNTDKVAQPASLENLL KRLGNDEFDLVAVGRALLVDPDWALKVREGREQDILPFSRDALTTLV >Mature_366_residues SAEALFTPFRLGSLELSSRVVMAPMTRSFSPGHVPNSKVVEYYRRRAAAGVGLIITEGTTVNHKASNGYPNVPQFFGEAP LAGWRKVVEAVHAEGGKIVPQLWHVGAVRRPGTEPDGSVPAYGPMEKVKDGQVLVHGMSKQDIDEVVAAFAQAAADARAI GMDGVEIHGAHGYLVDQFFWEGSNQRSDEYGGSLANRSRFALELIKAVRGAVGPDYPIIFRFSQWKQQDYTARLVQTPEA LGEFLQPLADAGVDIFHCSTRRFWEPEFEGSDLNLAGWTRKLTGKPTITVGSVGLDGEFLQFMVNTDKVAQPASLENLLK RLGNDEFDLVAVGRALLVDPDWALKVREGREQDILPFSRDALTTLV
Specific function: Reduces a range of alternative electron acceptors [H]
COG id: COG1902
COG function: function code C; NADH:flavin oxidoreductases, Old Yellow Enzyme family
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: In the N-terminal section; belongs to the NADH:flavin oxidoreductase/NADH oxidase family [H]
Homologues:
Organism=Escherichia coli, GI1787939, Length=377, Percent_Identity=31.5649867374005, Blast_Score=162, Evalue=4e-41, Organism=Escherichia coli, GI1789463, Length=363, Percent_Identity=29.4765840220386, Blast_Score=139, Evalue=4e-34, Organism=Caenorhabditis elegans, GI17566914, Length=199, Percent_Identity=30.6532663316583, Blast_Score=76, Evalue=2e-14, Organism=Caenorhabditis elegans, GI17565138, Length=209, Percent_Identity=30.1435406698565, Blast_Score=76, Evalue=3e-14, Organism=Caenorhabditis elegans, GI17559804, Length=191, Percent_Identity=30.3664921465969, Blast_Score=75, Evalue=6e-14, Organism=Caenorhabditis elegans, GI72001454, Length=68, Percent_Identity=50, Blast_Score=75, Evalue=7e-14, Organism=Caenorhabditis elegans, GI17564188, Length=223, Percent_Identity=27.8026905829596, Blast_Score=74, Evalue=1e-13, Organism=Caenorhabditis elegans, GI17559802, Length=74, Percent_Identity=44.5945945945946, Blast_Score=74, Evalue=2e-13, Organism=Caenorhabditis elegans, GI17540738, Length=212, Percent_Identity=27.3584905660377, Blast_Score=70, Evalue=1e-12, Organism=Saccharomyces cerevisiae, GI6321973, Length=224, Percent_Identity=39.7321428571429, Blast_Score=147, Evalue=3e-36, Organism=Saccharomyces cerevisiae, GI6325086, Length=375, Percent_Identity=31.2, Blast_Score=145, Evalue=9e-36,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR013027 - InterPro: IPR016040 - InterPro: IPR001155 - InterPro: IPR001327 - InterPro: IPR000103 [H]
Pfam domain/function: PF00724 Oxidored_FMN; PF00070 Pyr_redox; PF07992 Pyr_redox_2 [H]
EC number: 1.-.-.- [C]
Molecular weight: Translated: 40195; Mature: 40064
Theoretical pI: Translated: 5.90; Mature: 5.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAEALFTPFRLGSLELSSRVVMAPMTRSFSPGHVPNSKVVEYYRRRAAAGVGLIITEGT CCCCCEECCCCCCCEECCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEECCC TVNHKASNGYPNVPQFFGEAPLAGWRKVVEAVHAEGGKIVPQLWHVGAVRRPGTEPDGSV EECCCCCCCCCCCHHHHCCCCHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCCCCCC PAYGPMEKVKDGQVLVHGMSKQDIDEVVAAFAQAAADARAIGMDGVEIHGAHGYLVDQFF CCCCCHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHH WEGSNQRSDEYGGSLANRSRFALELIKAVRGAVGPDYPIIFRFSQWKQQDYTARLVQTPE HCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEHHHCCCCHHHHHHCCHH ALGEFLQPLADAGVDIFHCSTRRFWEPEFEGSDLNLAGWTRKLTGKPTITVGSVGLDGEF HHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCEECCCEEECCCCCEEEEECCCCCHHH LQFMVNTDKVAQPASLENLLKRLGNDEFDLVAVGRALLVDPDWALKVREGREQDILPFSR HHHEECCCCCCCCCCHHHHHHHHCCCCEEEEEECCEEEECCCCEEEECCCCCCCCCCCCH DALTTLV HHHHHCC >Mature Secondary Structure SAEALFTPFRLGSLELSSRVVMAPMTRSFSPGHVPNSKVVEYYRRRAAAGVGLIITEGT CCCCEECCCCCCCEECCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEECCC TVNHKASNGYPNVPQFFGEAPLAGWRKVVEAVHAEGGKIVPQLWHVGAVRRPGTEPDGSV EECCCCCCCCCCCHHHHCCCCHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCCCCCC PAYGPMEKVKDGQVLVHGMSKQDIDEVVAAFAQAAADARAIGMDGVEIHGAHGYLVDQFF CCCCCHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHH WEGSNQRSDEYGGSLANRSRFALELIKAVRGAVGPDYPIIFRFSQWKQQDYTARLVQTPE HCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEHHHCCCCHHHHHHCCHH ALGEFLQPLADAGVDIFHCSTRRFWEPEFEGSDLNLAGWTRKLTGKPTITVGSVGLDGEF HHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCEECCCEEECCCCCEEEEECCCCCHHH LQFMVNTDKVAQPASLENLLKRLGNDEFDLVAVGRALLVDPDWALKVREGREQDILPFSR HHHEECCCCCCCCCCHHHHHHHHCCCCEEEEEECCEEEECCCCEEEECCCCCCCCCCCCH DALTTLV HHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: FMN. [C]
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NADPH; N-ethylmaleimide [C]
Specific reaction: NADPH + N-ethylmaleimide = NADP + Cytotoxic compound [C]
General reaction: Reduction [C]
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8357835 [H]