| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
Click here to switch to the map view.
The map label for this gene is pgi [H]
Identifier: 66044081
GI number: 66044081
Start: 934924
End: 936588
Strand: Reverse
Name: pgi [H]
Synonym: Psyr_0826
Alternate gene names: 66044081
Gene position: 936588-934924 (Counterclockwise)
Preceding gene: 66044082
Following gene: 66044080
Centisome position: 15.37
GC content: 61.02
Gene sequence:
>1665_bases ATGGCGTACTACCGCACTCCTTCCGATGTGACCGCTCTGCCCGCCTGGCAAGCGTTGAACAAACACCGCCAGGCCATGCA GAACTTCAGCATGCGCGAAGCGTTCAACACCGACCCGCAGCGCTTCAGCCAATTCACCCTCAGCAGCGCCGGTCTGTTTC TCGATTATTCCAAAAACCTGATCACCACCGAGACCCGCGACCTGTTGGTCAGCCTGGCGGGCGAAGTGGGCCTCAAGGAC GCGATCAAGGCTCAGTATGATGGCGAGCTGGTCAACTCATCCGAAGGCCGCCCTGCCCTGCACACCGCTCTGCGCCGCCC GGTCGGCGACAAGTTGAAAGTCAACGGCGTCGATGTGATGCCGGACGTACACCGCGTCCTCAATCAGATGACCGAACTGG TCGGCCGCATCCATGACGGCCTGTGGCGCGGTTATACCGAAAAACCGATCACCGACGTGGTGAACATCGGCATCGGCGGC TCGTTCCTCGGCCCGGAGCTGGTCTCCGAAGCGCTGGTGGCCTACGCGCACAAAGGTGTCCGCTGCCATTACCTGGCCAA CATCGACGGCAGCGAGTTCCATGAGCTGTCGATGAAGATTCGTGCCGAGACCACGCTGTTCATCGTCTCGTCGAAATCCT TCAATACGCTGGAAACCCTGAAAAACGCGCAGGCTGCACGCGCCTGGTACCTGGCGCAGGGCGGCTCGGAAGTCGAACTG CATCGCCACTTCATCGCGGTGTCCAGCAACAACGCGGCGGCCGTGGCCTTCGGCATCCGTGAAGAAAACATCTTCCCTAT GTGGGACTGGGTCGGCGGTCGCTATTCGCTGTGGTCGGCCATCGGTCTGCCTATCGCGCTGGCCATCGGCATGTCCAACT TCAAGGAACTGCTGTCCGGTGCCTACACCATGGACCAGCATTTCCAGAGCGCACCGTTCGAACAGAACATGCCGGTATTA CTGGGCTTGCTGGGCGTCTGGTACGGCAATTTCTGGAACGCACAAAGCCACGCGATCCTGCCGTACGACCACTACCTGCG CAACATCACCAAGCACTTGCAACAACTGGACATGGAATCCAACGGCAAGAGCGTCCGTCAGGACGGTACGCCGACCTCGA CCGACACCGGACCGGTGATCTGGGGCGGCGTGGGTGCCAACGGTCAGCACGCTTACCACCAGTTGCTGCACCAGGGCACG CAGATGATTCCGGCCGACTTCATTGTGCCGATCGTCAGCTTCAACCCGGTTGCCGACCATCACCAGTGGCTGTACGCCAA CTGTCTGTCGCAGAGCCAGGCACTGATGATGGGCAAGACCCGCGCAGAAGCCGAAGCAGAACTGCGCGAGAAGGGTATGG ACGAGCAAGAGGTGCAGAAGCTGGCACCGCACAAGGTCATCCCTGGCAACCGTCCGAGCAACACGCTGGTGGTCGAGCGC ATCAGCCCGCGTCGTCTTGGCGCGCTGGTGGCCATGTATGAACACAAGGTGTTCGTGCAGAGCGTGATCTGGGGCACCAA CGCCTTTGACCAATGGGGTGTGGAGCTGGGCAAGGAAATGGGCAAGGCGGTGTACCAGCGTCTGACCGGCGGCACCGAAG AGCAGGCTGACGATGCATCGACCCAAGGCCTGATCAACTACTTCCGCGGCCGTCACCGCGGCTGA
Upstream 100 bases:
>100_bases GTACGCGAAGGGTAGTCTGCGATGTGTAGCCCGTGAGAAAGCTTGCGACCTCGCTCCAAGAATATCCAAAGACAGAACCA GTTAAAGGAAACCCGCAGCG
Downstream 100 bases:
>100_bases TTGTTTCCCTCTCGTTCCCACGCTCTGCGCTCAGCGTTACGCAGAAGTCTTGATGAGTAGGGGAAACGGGGCTTTTGTAG GAGCGACCGGGGCGGCGATC
Product: glucose-6-phosphate isomerase
Products: NA
Alternate protein names: GPI; Phosphoglucose isomerase; PGI; Phosphohexose isomerase; PHI [H]
Number of amino acids: Translated: 554; Mature: 553
Protein sequence:
>554_residues MAYYRTPSDVTALPAWQALNKHRQAMQNFSMREAFNTDPQRFSQFTLSSAGLFLDYSKNLITTETRDLLVSLAGEVGLKD AIKAQYDGELVNSSEGRPALHTALRRPVGDKLKVNGVDVMPDVHRVLNQMTELVGRIHDGLWRGYTEKPITDVVNIGIGG SFLGPELVSEALVAYAHKGVRCHYLANIDGSEFHELSMKIRAETTLFIVSSKSFNTLETLKNAQAARAWYLAQGGSEVEL HRHFIAVSSNNAAAVAFGIREENIFPMWDWVGGRYSLWSAIGLPIALAIGMSNFKELLSGAYTMDQHFQSAPFEQNMPVL LGLLGVWYGNFWNAQSHAILPYDHYLRNITKHLQQLDMESNGKSVRQDGTPTSTDTGPVIWGGVGANGQHAYHQLLHQGT QMIPADFIVPIVSFNPVADHHQWLYANCLSQSQALMMGKTRAEAEAELREKGMDEQEVQKLAPHKVIPGNRPSNTLVVER ISPRRLGALVAMYEHKVFVQSVIWGTNAFDQWGVELGKEMGKAVYQRLTGGTEEQADDASTQGLINYFRGRHRG
Sequences:
>Translated_554_residues MAYYRTPSDVTALPAWQALNKHRQAMQNFSMREAFNTDPQRFSQFTLSSAGLFLDYSKNLITTETRDLLVSLAGEVGLKD AIKAQYDGELVNSSEGRPALHTALRRPVGDKLKVNGVDVMPDVHRVLNQMTELVGRIHDGLWRGYTEKPITDVVNIGIGG SFLGPELVSEALVAYAHKGVRCHYLANIDGSEFHELSMKIRAETTLFIVSSKSFNTLETLKNAQAARAWYLAQGGSEVEL HRHFIAVSSNNAAAVAFGIREENIFPMWDWVGGRYSLWSAIGLPIALAIGMSNFKELLSGAYTMDQHFQSAPFEQNMPVL LGLLGVWYGNFWNAQSHAILPYDHYLRNITKHLQQLDMESNGKSVRQDGTPTSTDTGPVIWGGVGANGQHAYHQLLHQGT QMIPADFIVPIVSFNPVADHHQWLYANCLSQSQALMMGKTRAEAEAELREKGMDEQEVQKLAPHKVIPGNRPSNTLVVER ISPRRLGALVAMYEHKVFVQSVIWGTNAFDQWGVELGKEMGKAVYQRLTGGTEEQADDASTQGLINYFRGRHRG >Mature_553_residues AYYRTPSDVTALPAWQALNKHRQAMQNFSMREAFNTDPQRFSQFTLSSAGLFLDYSKNLITTETRDLLVSLAGEVGLKDA IKAQYDGELVNSSEGRPALHTALRRPVGDKLKVNGVDVMPDVHRVLNQMTELVGRIHDGLWRGYTEKPITDVVNIGIGGS FLGPELVSEALVAYAHKGVRCHYLANIDGSEFHELSMKIRAETTLFIVSSKSFNTLETLKNAQAARAWYLAQGGSEVELH RHFIAVSSNNAAAVAFGIREENIFPMWDWVGGRYSLWSAIGLPIALAIGMSNFKELLSGAYTMDQHFQSAPFEQNMPVLL GLLGVWYGNFWNAQSHAILPYDHYLRNITKHLQQLDMESNGKSVRQDGTPTSTDTGPVIWGGVGANGQHAYHQLLHQGTQ MIPADFIVPIVSFNPVADHHQWLYANCLSQSQALMMGKTRAEAEAELREKGMDEQEVQKLAPHKVIPGNRPSNTLVVERI SPRRLGALVAMYEHKVFVQSVIWGTNAFDQWGVELGKEMGKAVYQRLTGGTEEQADDASTQGLINYFRGRHRG
Specific function: Involved in glycolysis and in gluconeogenesis. [C]
COG id: COG0166
COG function: function code G; Glucose-6-phosphate isomerase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the GPI family [H]
Homologues:
Organism=Homo sapiens, GI18201905, Length=547, Percent_Identity=47.1663619744059, Blast_Score=551, Evalue=1e-157, Organism=Homo sapiens, GI296080693, Length=547, Percent_Identity=43.6928702010969, Blast_Score=498, Evalue=1e-141, Organism=Escherichia coli, GI1790457, Length=541, Percent_Identity=48.7985212569316, Blast_Score=550, Evalue=1e-158, Organism=Caenorhabditis elegans, GI71996708, Length=538, Percent_Identity=48.6988847583643, Blast_Score=546, Evalue=1e-155, Organism=Caenorhabditis elegans, GI71996703, Length=538, Percent_Identity=48.6988847583643, Blast_Score=545, Evalue=1e-155, Organism=Saccharomyces cerevisiae, GI6319673, Length=549, Percent_Identity=44.08014571949, Blast_Score=473, Evalue=1e-134, Organism=Drosophila melanogaster, GI24651916, Length=544, Percent_Identity=49.2647058823529, Blast_Score=551, Evalue=1e-157, Organism=Drosophila melanogaster, GI24651914, Length=544, Percent_Identity=49.2647058823529, Blast_Score=551, Evalue=1e-157, Organism=Drosophila melanogaster, GI17737445, Length=544, Percent_Identity=49.2647058823529, Blast_Score=551, Evalue=1e-157,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001672 - InterPro: IPR023096 - InterPro: IPR018189 [H]
Pfam domain/function: PF00342 PGI [H]
EC number: =5.3.1.9 [H]
Molecular weight: Translated: 61638; Mature: 61506
Theoretical pI: Translated: 6.90; Mature: 6.90
Prosite motif: PS00765 P_GLUCOSE_ISOMERASE_1 ; PS00174 P_GLUCOSE_ISOMERASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAYYRTPSDVTALPAWQALNKHRQAMQNFSMREAFNTDPQRFSQFTLSSAGLFLDYSKNL CCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHCCCCHHHHHHHHHHCCCEEEEECCCE ITTETRDLLVSLAGEVGLKDAIKAQYDGELVNSSEGRPALHTALRRPVGDKLKVNGVDVM ECHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCCCEEECCEECC PDVHRVLNQMTELVGRIHDGLWRGYTEKPITDVVNIGIGGSFLGPELVSEALVAYAHKGV HHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCC RCHYLANIDGSEFHELSMKIRAETTLFIVSSKSFNTLETLKNAQAARAWYLAQGGSEVEL EEEEEECCCCCHHHHHHEEEEEEEEEEEEECCCCHHHHHHHHHHHHHHHHEECCCCEEEE HRHFIAVSSNNAAAVAFGIREENIFPMWDWVGGRYSLWSAIGLPIALAIGMSNFKELLSG EEEEEEEECCCCEEEEEECCCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH AYTMDQHFQSAPFEQNMPVLLGLLGVWYGNFWNAQSHAILPYDHYLRNITKHLQQLDMES HHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCCEECCHHHHHHHHHHHHHHHCCCC NGKSVRQDGTPTSTDTGPVIWGGVGANGQHAYHQLLHQGTQMIPADFIVPIVSFNPVADH CCCCCCCCCCCCCCCCCCEEECCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCHH HQWLYANCLSQSQALMMGKTRAEAEAELREKGMDEQEVQKLAPHKVIPGNRPSNTLVVER HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCCCCEEEEC ISPRRLGALVAMYEHKVFVQSVIWGTNAFDQWGVELGKEMGKAVYQRLTGGTEEQADDAS CCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCHH TQGLINYFRGRHRG HHHHHHHHHCCCCC >Mature Secondary Structure AYYRTPSDVTALPAWQALNKHRQAMQNFSMREAFNTDPQRFSQFTLSSAGLFLDYSKNL CCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHCCCCHHHHHHHHHHCCCEEEEECCCE ITTETRDLLVSLAGEVGLKDAIKAQYDGELVNSSEGRPALHTALRRPVGDKLKVNGVDVM ECHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCCCEEECCEECC PDVHRVLNQMTELVGRIHDGLWRGYTEKPITDVVNIGIGGSFLGPELVSEALVAYAHKGV HHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCC RCHYLANIDGSEFHELSMKIRAETTLFIVSSKSFNTLETLKNAQAARAWYLAQGGSEVEL EEEEEECCCCCHHHHHHEEEEEEEEEEEEECCCCHHHHHHHHHHHHHHHHEECCCCEEEE HRHFIAVSSNNAAAVAFGIREENIFPMWDWVGGRYSLWSAIGLPIALAIGMSNFKELLSG EEEEEEEECCCCEEEEEECCCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH AYTMDQHFQSAPFEQNMPVLLGLLGVWYGNFWNAQSHAILPYDHYLRNITKHLQQLDMES HHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCCEECCHHHHHHHHHHHHHHHCCCC NGKSVRQDGTPTSTDTGPVIWGGVGANGQHAYHQLLHQGTQMIPADFIVPIVSFNPVADH CCCCCCCCCCCCCCCCCCEEECCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCHH HQWLYANCLSQSQALMMGKTRAEAEAELREKGMDEQEVQKLAPHKVIPGNRPSNTLVVER HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCCCCEEEEC ISPRRLGALVAMYEHKVFVQSVIWGTNAFDQWGVELGKEMGKAVYQRLTGGTEEQADDAS CCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCHH TQGLINYFRGRHRG HHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA