| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is 66044080
Identifier: 66044080
GI number: 66044080
Start: 933674
End: 934540
Strand: Reverse
Name: 66044080
Synonym: Psyr_0825
Alternate gene names: NA
Gene position: 934540-933674 (Counterclockwise)
Preceding gene: 66044081
Following gene: 66044079
Centisome position: 15.34
GC content: 64.71
Gene sequence:
>867_bases ATGGAATTCATCCGCACCCGCATCGAAACCCAGGTCATCAGCCTTACCGGCCTGGCCCTGGGTCAACTGGATCTGGAGAC CCCCAAGGGCGACCCGGGTCTGTTTGGCCCTCAGGCGGTGTGCTGGAAGGTGCATGGCGATTTCACCAGCATGCTGGTCG GCGGCATCAGCGCATTGATGCTGCAGGCGTTGCACCCGCTGGCACTGGCGGGCATCTGGGACCACTCCAACTTTCGTCAG GACATGCTCGGCCGCCTGCGGCGCACCGGGCAGTTTCTGTCCGGCACCACCTACGGCTCTACGCGGGATGCCAACTGGCT GATCGACAAGGTCCGCAACATTCACCTGAACATTGTCGGCACCGCGCCCGATGGCCGGCCGTATGCCGCCAGCGACCCGG AGTTGCTGACCTGGGTGCATGTAGCCGAAGTCAGCAGCTTTCTCGCAGCGCATGTGCGCTATCTCAACCCGGACATGTCG CTCGCCGATCAGGACGCGTACTACGCGGAAACGGCGCTGGTCGCCGAGCGACTCGGCGCACGCAACGTTCCGCGCTCCCG TCAGGCCATTGCTGACTATCTGGCCGACATACGCGACCAACTGGTGTGTGACGCGCGCAGCCGCGAAGTGCTGCGCCTGC TGCTCGATGCGCCCGCACCCAACTGGCTGGCCAAGCCTTTTGGCGTGTTGATGATGCGCGCCGGTATCGAGCTGCTGCCG GACTGGGCCAGCGACATGCTCGACGTCACGCAAAGCCCCTTCAAGCGCCGGATGATCCGCCTGGGCGTCAACAATACTGC GCCCATTCTGCGCTGGGCCGTGCGCGACGGATCGGCGCAACGAGCCAGACGCCGCATGGGCGTTTGA
Upstream 100 bases:
>100_bases GCGGATGTACCGGCCCTTTCGCAAGCAAGCGAAGGGTCGCACGGTCCGTTACCACAAAAGTCTCTTTGCCGTACTTCCCT CCCAGATGCCCGAGCCCGAC
Downstream 100 bases:
>100_bases ACGTGACATGAAGGTTTTCGGCAAACCGTGACCGGGCGGTTCACGGTTGGAACCTGCCTGCCTATCTGTGCCACCATGAG CACTCAATAACAATGAGGAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 288; Mature: 288
Protein sequence:
>288_residues MEFIRTRIETQVISLTGLALGQLDLETPKGDPGLFGPQAVCWKVHGDFTSMLVGGISALMLQALHPLALAGIWDHSNFRQ DMLGRLRRTGQFLSGTTYGSTRDANWLIDKVRNIHLNIVGTAPDGRPYAASDPELLTWVHVAEVSSFLAAHVRYLNPDMS LADQDAYYAETALVAERLGARNVPRSRQAIADYLADIRDQLVCDARSREVLRLLLDAPAPNWLAKPFGVLMMRAGIELLP DWASDMLDVTQSPFKRRMIRLGVNNTAPILRWAVRDGSAQRARRRMGV
Sequences:
>Translated_288_residues MEFIRTRIETQVISLTGLALGQLDLETPKGDPGLFGPQAVCWKVHGDFTSMLVGGISALMLQALHPLALAGIWDHSNFRQ DMLGRLRRTGQFLSGTTYGSTRDANWLIDKVRNIHLNIVGTAPDGRPYAASDPELLTWVHVAEVSSFLAAHVRYLNPDMS LADQDAYYAETALVAERLGARNVPRSRQAIADYLADIRDQLVCDARSREVLRLLLDAPAPNWLAKPFGVLMMRAGIELLP DWASDMLDVTQSPFKRRMIRLGVNNTAPILRWAVRDGSAQRARRRMGV >Mature_288_residues MEFIRTRIETQVISLTGLALGQLDLETPKGDPGLFGPQAVCWKVHGDFTSMLVGGISALMLQALHPLALAGIWDHSNFRQ DMLGRLRRTGQFLSGTTYGSTRDANWLIDKVRNIHLNIVGTAPDGRPYAASDPELLTWVHVAEVSSFLAAHVRYLNPDMS LADQDAYYAETALVAERLGARNVPRSRQAIADYLADIRDQLVCDARSREVLRLLLDAPAPNWLAKPFGVLMMRAGIELLP DWASDMLDVTQSPFKRRMIRLGVNNTAPILRWAVRDGSAQRARRRMGV
Specific function: Unknown
COG id: COG3662
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32041; Mature: 32041
Theoretical pI: Translated: 9.10; Mature: 9.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEFIRTRIETQVISLTGLALGQLDLETPKGDPGLFGPQAVCWKVHGDFTSMLVGGISALM CHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHH LQALHPLALAGIWDHSNFRQDMLGRLRRTGQFLSGTTYGSTRDANWLIDKVRNIHLNIVG HHHHHHHHHHHCCCCCHHHHHHHHHHHHCCHHHCCCCCCCCCCHHHHHHHHCEEEEEEEE TAPDGRPYAASDPELLTWVHVAEVSSFLAAHVRYLNPDMSLADQDAYYAETALVAERLGA ECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCC RNVPRSRQAIADYLADIRDQLVCDARSREVLRLLLDAPAPNWLAKPFGVLMMRAGIELLP CCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCHHHCC DWASDMLDVTQSPFKRRMIRLGVNNTAPILRWAVRDGSAQRARRRMGV HHHHHHHHHHHCHHHHHHHHHCCCCCCHHHHHHHCCCCHHHHHHHCCC >Mature Secondary Structure MEFIRTRIETQVISLTGLALGQLDLETPKGDPGLFGPQAVCWKVHGDFTSMLVGGISALM CHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHH LQALHPLALAGIWDHSNFRQDMLGRLRRTGQFLSGTTYGSTRDANWLIDKVRNIHLNIVG HHHHHHHHHHHCCCCCHHHHHHHHHHHHCCHHHCCCCCCCCCCHHHHHHHHCEEEEEEEE TAPDGRPYAASDPELLTWVHVAEVSSFLAAHVRYLNPDMSLADQDAYYAETALVAERLGA ECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCC RNVPRSRQAIADYLADIRDQLVCDARSREVLRLLLDAPAPNWLAKPFGVLMMRAGIELLP CCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCHHHCC DWASDMLDVTQSPFKRRMIRLGVNNTAPILRWAVRDGSAQRARRRMGV HHHHHHHHHHHCHHHHHHHHHCCCCCCHHHHHHHCCCCHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA