Definition Vibrio fischeri ES114 chromosome I, complete genome.
Accession NC_006840
Length 2,897,536

Click here to switch to the map view.

The map label for this gene is 59712625

Identifier: 59712625

GI number: 59712625

Start: 2251266

End: 2251499

Strand: Reverse

Name: 59712625

Synonym: VF_2018

Alternate gene names: NA

Gene position: 2251499-2251266 (Counterclockwise)

Preceding gene: 59712626

Following gene: 59712624

Centisome position: 77.7

GC content: 38.46

Gene sequence:

>234_bases
ATGCCGGAGAAAGATATTGCACGTATTGATGTAACGATGAGTCATCTTGTCGAATTAACGCGTGAGCAAAATACAACATT
AAAAAAGGTTCTTGAAATGCTAACAGAGACTCGTACAAAGCAAGAGTCACATTCTGAGCGCATAGGTAAATTAGAATCAG
ATAAAACATGGTTAGTAAGATTAATACTGGCCGCACTCATCACAGCAATCGTTGCTGCAGTTAAGGCGTTATAA

Upstream 100 bases:

>100_bases
GTGCGGGGTTTTCTACATTTGGAATATAGGATTTTCATCAATATTAACTACTTTACGCGCGCGATACACTGAGCACTAAC
GTTATCACATTGAGTCAATT

Downstream 100 bases:

>100_bases
AATGAATAAATTCAGTAAAACAAGCGCGGCACGTTTAGCTACTTGCCACCCTGATTTAATAAAAGTATTCACTCGCGTTC
TTGAGCTTTGCGACTGCTCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 77; Mature: 76

Protein sequence:

>77_residues
MPEKDIARIDVTMSHLVELTREQNTTLKKVLEMLTETRTKQESHSERIGKLESDKTWLVRLILAALITAIVAAVKAL

Sequences:

>Translated_77_residues
MPEKDIARIDVTMSHLVELTREQNTTLKKVLEMLTETRTKQESHSERIGKLESDKTWLVRLILAALITAIVAAVKAL
>Mature_76_residues
PEKDIARIDVTMSHLVELTREQNTTLKKVLEMLTETRTKQESHSERIGKLESDKTWLVRLILAALITAIVAAVKAL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 8727; Mature: 8596

Theoretical pI: Translated: 9.24; Mature: 9.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPEKDIARIDVTMSHLVELTREQNTTLKKVLEMLTETRTKQESHSERIGKLESDKTWLVR
CCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH
LILAALITAIVAAVKAL
HHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
PEKDIARIDVTMSHLVELTREQNTTLKKVLEMLTETRTKQESHSERIGKLESDKTWLVR
CCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH
LILAALITAIVAAVKAL
HHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA