| Definition | Thermus thermophilus HB8 chromosome, complete genome. |
|---|---|
| Accession | NC_006461 |
| Length | 1,849,742 |
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The map label for this gene is erpA [H]
Identifier: 55981604
GI number: 55981604
Start: 1550036
End: 1550416
Strand: Reverse
Name: erpA [H]
Synonym: TTHA1635
Alternate gene names: 55981604
Gene position: 1550416-1550036 (Counterclockwise)
Preceding gene: 55981611
Following gene: 55981603
Centisome position: 83.82
GC content: 66.93
Gene sequence:
>381_bases ATGGTGGAAACCCAAGAGGCGGTCATCCGCATCACCCCCCTGGCGGCGGAGAAGGCCAAGGAGATCCTTGCCCGCTACGG CAAGGAGCACGCGGCCATCCGCGTCTACATCAAGTCCGGCGGCTGCTCGGGCTTCCAGTACGGCATGGCCGTGGACGAAA GGGAGCTTCCGGGGGACACCTTCGTGGAGATGCACGGGGTGCGCCTGGTGGTGGACCGGATGTCCCTGCCCTACCTCGTG GGCTCGGAGATTGACTGGGTGGAAAGCCTCATGGGCGGGGGCTTTACCGTCCATAACCCCAATGCGGCCAGCACCTGCGG CTGCGGCCACTCCTTCCGCACCAAGGACCAGGAGGGGGCCCCCCGCACCTGCGGGCACTGA
Upstream 100 bases:
>100_bases CCTGCACCGCCCGTAGCTCCATGGGTCCATCCTACCTCTGGAAGCTCCCTCACCTTCTCCTACCCCTTCCGTGCTAGCCT TAGGGGTAAGGAGGTTCGGC
Downstream 100 bases:
>100_bases GCGTCCGCTTCGCCACGTGGGAGGCTCGTCGGGGCTTCTATAGGCTTTCGCCGCGGTGGGCCACTCAGGGGGCAAAGGGG CCTGGCTTCAGGCCCCTTTA
Product: iron-sulfur cluster biosynthesis protein IscA
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 126; Mature: 126
Protein sequence:
>126_residues MVETQEAVIRITPLAAEKAKEILARYGKEHAAIRVYIKSGGCSGFQYGMAVDERELPGDTFVEMHGVRLVVDRMSLPYLV GSEIDWVESLMGGGFTVHNPNAASTCGCGHSFRTKDQEGAPRTCGH
Sequences:
>Translated_126_residues MVETQEAVIRITPLAAEKAKEILARYGKEHAAIRVYIKSGGCSGFQYGMAVDERELPGDTFVEMHGVRLVVDRMSLPYLV GSEIDWVESLMGGGFTVHNPNAASTCGCGHSFRTKDQEGAPRTCGH >Mature_126_residues MVETQEAVIRITPLAAEKAKEILARYGKEHAAIRVYIKSGGCSGFQYGMAVDERELPGDTFVEMHGVRLVVDRMSLPYLV GSEIDWVESLMGGGFTVHNPNAASTCGCGHSFRTKDQEGAPRTCGH
Specific function: Required for insertion of 4Fe-4S clusters for at least ispG [H]
COG id: COG0316
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the hesB/iscA family [H]
Homologues:
Organism=Homo sapiens, GI52426768, Length=106, Percent_Identity=33.9622641509434, Blast_Score=77, Evalue=3e-15, Organism=Homo sapiens, GI160420328, Length=114, Percent_Identity=37.719298245614, Blast_Score=75, Evalue=9e-15, Organism=Escherichia coli, GI1786351, Length=104, Percent_Identity=51.9230769230769, Blast_Score=111, Evalue=1e-26, Organism=Escherichia coli, GI1788877, Length=104, Percent_Identity=36.5384615384615, Blast_Score=75, Evalue=2e-15, Organism=Escherichia coli, GI1787974, Length=104, Percent_Identity=32.6923076923077, Blast_Score=68, Evalue=2e-13, Organism=Caenorhabditis elegans, GI71998452, Length=118, Percent_Identity=36.4406779661017, Blast_Score=72, Evalue=5e-14, Organism=Caenorhabditis elegans, GI25146411, Length=109, Percent_Identity=31.1926605504587, Blast_Score=66, Evalue=5e-12, Organism=Caenorhabditis elegans, GI193209025, Length=109, Percent_Identity=31.1926605504587, Blast_Score=66, Evalue=6e-12, Organism=Saccharomyces cerevisiae, GI6323001, Length=106, Percent_Identity=36.7924528301887, Blast_Score=81, Evalue=5e-17, Organism=Drosophila melanogaster, GI24642263, Length=106, Percent_Identity=32.0754716981132, Blast_Score=70, Evalue=5e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000361 - InterPro: IPR016092 - InterPro: IPR017870 - InterPro: IPR023063 [H]
Pfam domain/function: PF01521 Fe-S_biosyn [H]
EC number: NA
Molecular weight: Translated: 13701; Mature: 13701
Theoretical pI: Translated: 6.34; Mature: 6.34
Prosite motif: PS01152 HESB
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.2 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 7.1 %Cys+Met (Translated Protein) 3.2 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 7.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVETQEAVIRITPLAAEKAKEILARYGKEHAAIRVYIKSGGCSGFQYGMAVDERELPGDT CCCCCCEEEEECCCCHHHHHHHHHHHCCCCEEEEEEEECCCCCCEECCCEECCCCCCCCC FVEMHGVRLVVDRMSLPYLVGSEIDWVESLMGGGFTVHNPNAASTCGCGHSFRTKDQEGA EEEECCEEEEEECCCCCEEECCCCHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCCCCC PRTCGH CCCCCC >Mature Secondary Structure MVETQEAVIRITPLAAEKAKEILARYGKEHAAIRVYIKSGGCSGFQYGMAVDERELPGDT CCCCCCEEEEECCCCHHHHHHHHHHHCCCCEEEEEEEECCCCCCEECCCEECCCCCCCCC FVEMHGVRLVVDRMSLPYLVGSEIDWVESLMGGGFTVHNPNAASTCGCGHSFRTKDQEGA EEEECCEEEEEECCCCCEEECCCCHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCCCCC PRTCGH CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA