Definition Burkholderia pseudomallei K96243 chromosome chromosome 1, complete sequence.
Accession NC_006350
Length 4,074,542

Click here to switch to the map view.

The map label for this gene is yggG [C]

Identifier: 53717836

GI number: 53717836

Start: 201249

End: 202193

Strand: Reverse

Name: yggG [C]

Synonym: BPSL0194

Alternate gene names: 53717836

Gene position: 202193-201249 (Counterclockwise)

Preceding gene: 53717837

Following gene: 53717834

Centisome position: 4.96

GC content: 73.02

Gene sequence:

>945_bases
ATGCTCGTCGCCGACAACGGCGCGCCGCCGGTGCCGAGCGCGCCCGCCGTCGCCACTCCGGCGGCGCCGGCCGCGGCCCC
CGCCGCCGGCAATCCGCAGCCGTACGCGCTCGGCGATCAGCAGGTGCGCTACGGCAACGCGATCGTGTTCCGCAGCCTGA
TTCCGTCGCCGCTCCTCGAACAGCTGACCGACAACGAATACCGGCAGACCGTGCAGGACGCCGCGCAGCGCAAGCGCCTG
CTGCCGCCGAACAACGCGCGCGTGAAGCGGCTGCGCACGATCGTCATGCGGCTCGCGCCGTATGCGGTCAAGTGGAGCGA
GCGCGTGAAGGGCTGGAACTGGGAAATCGAGGTGCTGCGCTCGCGTTCGATCCGCGCGTTCTGCCTGCCGGGCGGCAAGG
TGCTCGTCGACAGCGGGCTGCTCGAGCGACTGCGCCTCACCGACGACGAGCTCGGCGTGCTGTTCGCGCACGAGATCGCG
CACGCGCTGCGCGAGCACGCGCGCTCGAGCCTCGGCGAGCAGCAGGCCGCGTCGCTCGGCACCGGCGCGACGCCGCTGCC
GCCGCTCTTCGGGCTGTCGGAGCCGCTGCCCGCGCCGCTTGGCGTCGTCGAGCGCTTCGCGTCGGTCCGCTACGATCCGA
CCGACGAAACCGAGGCCGACGTGATCGGCGGCGACATCGCCGCGCGCGCCGGCTTCGATCCGCGCGCGGCGATCACGCTG
TGGGACAAGCTCGCGGTCGCGACACGCGCCGACAAGGACAACGGTTTCATCCATGCGCATCCGTACGACACGCGGCGCCG
CAACGATCTGCGCAAGCGCCTCGCCGACCTGATGCCGCTCTATCGGAAGGCGCTCGTCAAAAACGCCGACGCGCGCGCGA
ACGCCGCGGGCGCGGGCGCCGCGGCCGGCGCGAAGCAGCGCGGCGCCGCGGCGGCGAATCGGTGA

Upstream 100 bases:

>100_bases
TAAGCTGCGCGTCGCCCGCGCCGCGCTCACGTTCGTGGGCGGCGTCGCGCTCGGCGTCGCGGGCCCGGTGCTCGGGTTCG
AGCTGTGCATGGCCGAGCCG

Downstream 100 bases:

>100_bases
TCGGCATCGGATAATCGATCGGGCGGAGCCGGCGGCGACGTTCGCGCCGCCCCGGCGCCGCATACGATGCATGGATCGGC
GCGCTTTCGCGGGTTCGCGC

Product: hypothetical protein

Products: NA

Alternate protein names: M48 Family Peptidase; Lipoprotein; Zn-Dependent Protease With Chaperone Function; Zn-Dependent Protease; Peptidase M; HtpX Protein; Exported Peptidase; Membrane-Associated Zinc Metalloprotease Peptidase; Zinc Metallopeptidase; Peptidase Family; Signal Peptide; M48 Family Metalloprotease; Zn-Dependent Protease With Chaperone Function Protein; Signal Peptide Protein; M48 Family Zinc Metallopeptidase; Zinc Metalloprotease; M48-Family Peptidase

Number of amino acids: Translated: 314; Mature: 314

Protein sequence:

>314_residues
MLVADNGAPPVPSAPAVATPAAPAAAPAAGNPQPYALGDQQVRYGNAIVFRSLIPSPLLEQLTDNEYRQTVQDAAQRKRL
LPPNNARVKRLRTIVMRLAPYAVKWSERVKGWNWEIEVLRSRSIRAFCLPGGKVLVDSGLLERLRLTDDELGVLFAHEIA
HALREHARSSLGEQQAASLGTGATPLPPLFGLSEPLPAPLGVVERFASVRYDPTDETEADVIGGDIAARAGFDPRAAITL
WDKLAVATRADKDNGFIHAHPYDTRRRNDLRKRLADLMPLYRKALVKNADARANAAGAGAAAGAKQRGAAAANR

Sequences:

>Translated_314_residues
MLVADNGAPPVPSAPAVATPAAPAAAPAAGNPQPYALGDQQVRYGNAIVFRSLIPSPLLEQLTDNEYRQTVQDAAQRKRL
LPPNNARVKRLRTIVMRLAPYAVKWSERVKGWNWEIEVLRSRSIRAFCLPGGKVLVDSGLLERLRLTDDELGVLFAHEIA
HALREHARSSLGEQQAASLGTGATPLPPLFGLSEPLPAPLGVVERFASVRYDPTDETEADVIGGDIAARAGFDPRAAITL
WDKLAVATRADKDNGFIHAHPYDTRRRNDLRKRLADLMPLYRKALVKNADARANAAGAGAAAGAKQRGAAAANR
>Mature_314_residues
MLVADNGAPPVPSAPAVATPAAPAAAPAAGNPQPYALGDQQVRYGNAIVFRSLIPSPLLEQLTDNEYRQTVQDAAQRKRL
LPPNNARVKRLRTIVMRLAPYAVKWSERVKGWNWEIEVLRSRSIRAFCLPGGKVLVDSGLLERLRLTDDELGVLFAHEIA
HALREHARSSLGEQQAASLGTGATPLPPLFGLSEPLPAPLGVVERFASVRYDPTDETEADVIGGDIAARAGFDPRAAITL
WDKLAVATRADKDNGFIHAHPYDTRRRNDLRKRLADLMPLYRKALVKNADARANAAGAGAAAGAKQRGAAAANR

Specific function: Seems To Regulate The Expression Of Speb. [C]

COG id: COG0501

COG function: function code O; Zn-dependent protease with chaperone function

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87082185, Length=249, Percent_Identity=24.0963855421687, Blast_Score=65, Evalue=8e-12,
Organism=Escherichia coli, GI1788840, Length=176, Percent_Identity=28.9772727272727, Blast_Score=63, Evalue=3e-11,
Organism=Saccharomyces cerevisiae, GI6322940, Length=236, Percent_Identity=29.2372881355932, Blast_Score=82, Evalue=9e-17,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 3.4.24.- [C]

Molecular weight: Translated: 33827; Mature: 33827

Theoretical pI: Translated: 10.29; Mature: 10.29

Prosite motif: PS00142 ZINC_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLVADNGAPPVPSAPAVATPAAPAAAPAAGNPQPYALGDQQVRYGNAIVFRSLIPSPLLE
CEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCHHHHHHHCCHHHHH
QLTDNEYRQTVQDAAQRKRLLPPNNARVKRLRTIVMRLAPYAVKWSERVKGWNWEIEVLR
HHCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEC
SRSIRAFCLPGGKVLVDSGLLERLRLTDDELGVLFAHEIAHALREHARSSLGEQQAASLG
CCCCEEEECCCCCEEECHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHCC
TGATPLPPLFGLSEPLPAPLGVVERFASVRYDPTDETEADVIGGDIAARAGFDPRAAITL
CCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHCCHHHHHCCCCCCHHHHH
WDKLAVATRADKDNGFIHAHPYDTRRRNDLRKRLADLMPLYRKALVKNADARANAAGAGA
HHHHHHHHCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCH
AAGAKQRGAAAANR
HCCCHHHCCCCCCC
>Mature Secondary Structure
MLVADNGAPPVPSAPAVATPAAPAAAPAAGNPQPYALGDQQVRYGNAIVFRSLIPSPLLE
CEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCHHHHHHHCCHHHHH
QLTDNEYRQTVQDAAQRKRLLPPNNARVKRLRTIVMRLAPYAVKWSERVKGWNWEIEVLR
HHCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEC
SRSIRAFCLPGGKVLVDSGLLERLRLTDDELGVLFAHEIAHALREHARSSLGEQQAASLG
CCCCEEEECCCCCEEECHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHCC
TGATPLPPLFGLSEPLPAPLGVVERFASVRYDPTDETEADVIGGDIAARAGFDPRAAITL
CCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHCCHHHHHCCCCCCHHHHH
WDKLAVATRADKDNGFIHAHPYDTRRRNDLRKRLADLMPLYRKALVKNADARANAAGAGA
HHHHHHHHCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCH
AAGAKQRGAAAANR
HCCCHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: Zn [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA