| Definition | Yersinia pseudotuberculosis IP 32953, complete genome. |
|---|---|
| Accession | NC_006155 |
| Length | 4,744,671 |
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The map label for this gene is 51596138
Identifier: 51596138
GI number: 51596138
Start: 2150978
End: 2151787
Strand: Direct
Name: 51596138
Synonym: YPTB1803
Alternate gene names: NA
Gene position: 2150978-2151787 (Clockwise)
Preceding gene: 51596137
Following gene: 51596139
Centisome position: 45.33
GC content: 49.63
Gene sequence:
>810_bases ATGACCACTGCAATTGAACAACTTATTAAAATGCACGATCCGCGCTGCGTCAGCATTGAATCGCTGAATATTGGCCGGGG TCGTGCCGTTCTGACCAAAGACCAGATATTAGGGACTTTCGCCACCTGCCAGCACCAACATCCCATTGGCTTCGATATCT TGATGACCAAATACCGTAATGACTGCCAAGCCGAGCAGCGCTTACGGGCGGTTATAGGTGGGTGGTTGCATAAGCGACCA CATCCAGCGCGAGCTATTGCTGCCTGCCAGTTGGCACTTAATATGGTATTGGATAGAAACCTTCCGGCGCAGGTAGAGCA AATTGCCACTTTACTGCGTCGTTACGGCTCCCGTACAGGTATCACCAGAAAAGTCGTTGATGGACTCCAGCAGCAAATCA AATTACTGGAAAGAGATAAAGCGCAGGCACTTGATGATGGCACTATCGCATTACTGGCAGACGAAATAAAAACCCTTCAG TCTAAAATCAAAACAGAACGTGGTGCACTGCGGGCGTGGGCTAATCATCAGGCGGCGATAAAGCAAGTCTGCCCCCGTTG TCACGGTGCCGGTAAAACCCTGCGGCCTCATCCCGAAATATGCAACGAGTGCGGCGGCAGTGGCCGTATACCGCCTACAA TGGAACACCTGCGCAAATCTATGGGTATCATAGGGGCTGAGATATCCGGTGGGGATTGGGCGGCGCAATATGTGCCTCTG GTTAAAGAATGTATGCATTGGCTATATGTTGAAGAATCGAGTGCTGGTGAGGTTTTAATTGAAAGAATTCAGCTAGAAAA AGACTTTTGA
Upstream 100 bases:
>100_bases CAAAGTGATTTCATTTTTTGCAATAATTTAATTATTATTGCGATTTGTGAAATGAACTATAAAATCAGTCCTGTGAATTT AAAACACAGGACTGACCAAT
Downstream 100 bases:
>100_bases CCAATGATTGACCCTACATCATTAACGCGCTAAATTACACAAAGATGCCGGAGTATGCTTAAAAGCTGCTCCGGTTTTTT ATTGGTCAGTTCCGGTCAGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 269; Mature: 268
Protein sequence:
>269_residues MTTAIEQLIKMHDPRCVSIESLNIGRGRAVLTKDQILGTFATCQHQHPIGFDILMTKYRNDCQAEQRLRAVIGGWLHKRP HPARAIAACQLALNMVLDRNLPAQVEQIATLLRRYGSRTGITRKVVDGLQQQIKLLERDKAQALDDGTIALLADEIKTLQ SKIKTERGALRAWANHQAAIKQVCPRCHGAGKTLRPHPEICNECGGSGRIPPTMEHLRKSMGIIGAEISGGDWAAQYVPL VKECMHWLYVEESSAGEVLIERIQLEKDF
Sequences:
>Translated_269_residues MTTAIEQLIKMHDPRCVSIESLNIGRGRAVLTKDQILGTFATCQHQHPIGFDILMTKYRNDCQAEQRLRAVIGGWLHKRP HPARAIAACQLALNMVLDRNLPAQVEQIATLLRRYGSRTGITRKVVDGLQQQIKLLERDKAQALDDGTIALLADEIKTLQ SKIKTERGALRAWANHQAAIKQVCPRCHGAGKTLRPHPEICNECGGSGRIPPTMEHLRKSMGIIGAEISGGDWAAQYVPL VKECMHWLYVEESSAGEVLIERIQLEKDF >Mature_268_residues TTAIEQLIKMHDPRCVSIESLNIGRGRAVLTKDQILGTFATCQHQHPIGFDILMTKYRNDCQAEQRLRAVIGGWLHKRPH PARAIAACQLALNMVLDRNLPAQVEQIATLLRRYGSRTGITRKVVDGLQQQIKLLERDKAQALDDGTIALLADEIKTLQS KIKTERGALRAWANHQAAIKQVCPRCHGAGKTLRPHPEICNECGGSGRIPPTMEHLRKSMGIIGAEISGGDWAAQYVPLV KECMHWLYVEESSAGEVLIERIQLEKDF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30006; Mature: 29875
Theoretical pI: Translated: 8.82; Mature: 8.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.3 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 5.9 %Cys+Met (Translated Protein) 3.4 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTAIEQLIKMHDPRCVSIESLNIGRGRAVLTKDQILGTFATCQHQHPIGFDILMTKYRN CCHHHHHHHHHCCCCEEEEECCCCCCCCEEEEHHHHHHHHHHHCCCCCCCHHHHHHHHHH DCQAEQRLRAVIGGWLHKRPHPARAIAACQLALNMVLDRNLPAQVEQIATLLRRYGSRTG HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCC ITRKVVDGLQQQIKLLERDKAQALDDGTIALLADEIKTLQSKIKTERGALRAWANHQAAI HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KQVCPRCHGAGKTLRPHPEICNECGGSGRIPPTMEHLRKSMGIIGAEISGGDWAAQYVPL HHHHHHHCCCCCCCCCCHHHHHHCCCCCCCCHHHHHHHHHHCCEEEECCCCCHHHHHHHH VKECMHWLYVEESSAGEVLIERIQLEKDF HHHHHHHHHHCCCCHHHHHHHHHHHHCCC >Mature Secondary Structure TTAIEQLIKMHDPRCVSIESLNIGRGRAVLTKDQILGTFATCQHQHPIGFDILMTKYRN CHHHHHHHHHCCCCEEEEECCCCCCCCEEEEHHHHHHHHHHHCCCCCCCHHHHHHHHHH DCQAEQRLRAVIGGWLHKRPHPARAIAACQLALNMVLDRNLPAQVEQIATLLRRYGSRTG HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCC ITRKVVDGLQQQIKLLERDKAQALDDGTIALLADEIKTLQSKIKTERGALRAWANHQAAI HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KQVCPRCHGAGKTLRPHPEICNECGGSGRIPPTMEHLRKSMGIIGAEISGGDWAAQYVPL HHHHHHHCCCCCCCCCCHHHHHHCCCCCCCCHHHHHHHHHHCCEEEECCCCCHHHHHHHH VKECMHWLYVEESSAGEVLIERIQLEKDF HHHHHHHHHHCCCCHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA