Definition Candidatus Protochlamydia amoebophila UWE25, complete genome.
Accession NC_005861
Length 2,414,465

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The map label for this gene is 46447160

Identifier: 46447160

GI number: 46447160

Start: 1830167

End: 1831660

Strand: Direct

Name: 46447160

Synonym: pc1526

Alternate gene names: NA

Gene position: 1830167-1831660 (Clockwise)

Preceding gene: 46447159

Following gene: 46447163

Centisome position: 75.8

GC content: 33.27

Gene sequence:

>1494_bases
ATGACTATTAATTCTAACTCTCTCTGGGCTGAACAACCAGAGCCTTTATCTATAGCTCTTTCACCTCCATTTTCTTCTAT
AAATTTACAAAAAGCTTCTCTTGTTGATAAAGCGAATTCTTTCGAAAAAACGAATGAAGATTTTATTTCTTCCATCACCC
CTTCGGATTTGCCAACTTTAATAGAGCCTAATAGCTTAACGCTTCAAACAACTTCCCTGCAAAAATTGCTCGAAAAAAAG
GTTCAAGGAGCAACTGAAATTGTGGAAGAAGCTTTAAAGCTTTTAAATCCTAATTTGACTGAGAAAACGAACAATACGCT
TTCAAAAGAAGTCATCGAGATGAAAGATTCTTTGCAAACTTTCTTAAAATTGATGGATACTGCCCTAACCCATTTTCATC
CCATACGAAGTAAAATGGATTTTCTAGAAACCTATGATAGCCGGGCATTAGTCAACGCAATACTAAGATTATCAGAAATA
CGCGTACGCTTTTCGCGAGAAAATAATTCTTTTCAATCTCTTTTTAAAACACTACCTGCCGCACAAATTAAGATTTTAGC
CCCTCTTATAAAGTTTACTTTCGAAGAAATTTGTCAACCCCTTTTAAAATTAAACGAAGAAAAAAAAGTTTTAGGTCACG
ATGGAAAGATAAACGAAGATCACATGGACACATTTAAACTATTTTGGAAATCATTTTTAAATAAGGAAATTAGTTTCGAG
CAAAAAGAAATTCACCCTTTAATTGCTCAAAATCTAAGTTTTCTTCCTCTTCCGCAACTCGCTAATAAAATGCTTTCTGA
ATGGTTATTAGAATCATCATTACTAAAACCTAATTCTAAAGAAAAAGAAACTCTGGTTACTAATTCTCCCGTCGAATTCA
ATATCTTACCTTTTGATATTCAGCAAACTCTCGATTTACTGCTTATCAAAATTATCATTCATCAAGCTCTAGGTTTTGTG
ATGATTCACCAAATCAATCCATTATTTGACCCCTTTGATTTTGGGCTTCAGGTTATTCATCAATGGTTGAAGGAACGGAT
AGCCGAACTACTGACTAACGATATCGACGGTTATACATCTTTAGGTACAGCGTTAGAAAAAAATCTTATTAAAAAAAGCT
TAATTGTTTTTGCATTGATTATTTCGATTGGTTATGCAGAGCAAAGCCATTCCTCAAGAATCAAAATAGCTCAAACCCTA
AAAAAAATAGCTTCTCATTCTACTTTACACGAGCCTTTTTTTTATGCTAATGCTGCTCTCATTTTAATCCAGGGATGTGA
AAAAGAGGGAAATCAATTAAGGATTCAACAATTTATTCGCTACCTTGCGAAAGAAACAGAAATTAACGGCGAAGACATGG
AAAAATGGAGAGTACTTCAATATTTATTAATTGAGATGTTGAAAAAAATTTTAACAATTTCAAACCATCCCATCTCTTCG
GATGTCGATCCTCTTCATGAAGAAAACTATTTTTCTATGATCATTCAAGGGTAA

Upstream 100 bases:

>100_bases
GCGCAATTAAATTCTCAATACTCTGAAATTCAAAAACGAGCGGAGATGACATTAGAAACATTAATGCCTAGTCAACAAAA
AACAAAACAGCCGAGGCATC

Downstream 100 bases:

>100_bases
ACTAGGGAAGAATAAATCCGTTTAAAAAAAATAAGTTGTCGTTTTTTTTAAACGGATCCTTCGTTTTAAAAAGAGAATTT
TAATCCAAAATAGTACTTTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 497; Mature: 496

Protein sequence:

>497_residues
MTINSNSLWAEQPEPLSIALSPPFSSINLQKASLVDKANSFEKTNEDFISSITPSDLPTLIEPNSLTLQTTSLQKLLEKK
VQGATEIVEEALKLLNPNLTEKTNNTLSKEVIEMKDSLQTFLKLMDTALTHFHPIRSKMDFLETYDSRALVNAILRLSEI
RVRFSRENNSFQSLFKTLPAAQIKILAPLIKFTFEEICQPLLKLNEEKKVLGHDGKINEDHMDTFKLFWKSFLNKEISFE
QKEIHPLIAQNLSFLPLPQLANKMLSEWLLESSLLKPNSKEKETLVTNSPVEFNILPFDIQQTLDLLLIKIIIHQALGFV
MIHQINPLFDPFDFGLQVIHQWLKERIAELLTNDIDGYTSLGTALEKNLIKKSLIVFALIISIGYAEQSHSSRIKIAQTL
KKIASHSTLHEPFFYANAALILIQGCEKEGNQLRIQQFIRYLAKETEINGEDMEKWRVLQYLLIEMLKKILTISNHPISS
DVDPLHEENYFSMIIQG

Sequences:

>Translated_497_residues
MTINSNSLWAEQPEPLSIALSPPFSSINLQKASLVDKANSFEKTNEDFISSITPSDLPTLIEPNSLTLQTTSLQKLLEKK
VQGATEIVEEALKLLNPNLTEKTNNTLSKEVIEMKDSLQTFLKLMDTALTHFHPIRSKMDFLETYDSRALVNAILRLSEI
RVRFSRENNSFQSLFKTLPAAQIKILAPLIKFTFEEICQPLLKLNEEKKVLGHDGKINEDHMDTFKLFWKSFLNKEISFE
QKEIHPLIAQNLSFLPLPQLANKMLSEWLLESSLLKPNSKEKETLVTNSPVEFNILPFDIQQTLDLLLIKIIIHQALGFV
MIHQINPLFDPFDFGLQVIHQWLKERIAELLTNDIDGYTSLGTALEKNLIKKSLIVFALIISIGYAEQSHSSRIKIAQTL
KKIASHSTLHEPFFYANAALILIQGCEKEGNQLRIQQFIRYLAKETEINGEDMEKWRVLQYLLIEMLKKILTISNHPISS
DVDPLHEENYFSMIIQG
>Mature_496_residues
TINSNSLWAEQPEPLSIALSPPFSSINLQKASLVDKANSFEKTNEDFISSITPSDLPTLIEPNSLTLQTTSLQKLLEKKV
QGATEIVEEALKLLNPNLTEKTNNTLSKEVIEMKDSLQTFLKLMDTALTHFHPIRSKMDFLETYDSRALVNAILRLSEIR
VRFSRENNSFQSLFKTLPAAQIKILAPLIKFTFEEICQPLLKLNEEKKVLGHDGKINEDHMDTFKLFWKSFLNKEISFEQ
KEIHPLIAQNLSFLPLPQLANKMLSEWLLESSLLKPNSKEKETLVTNSPVEFNILPFDIQQTLDLLLIKIIIHQALGFVM
IHQINPLFDPFDFGLQVIHQWLKERIAELLTNDIDGYTSLGTALEKNLIKKSLIVFALIISIGYAEQSHSSRIKIAQTLK
KIASHSTLHEPFFYANAALILIQGCEKEGNQLRIQQFIRYLAKETEINGEDMEKWRVLQYLLIEMLKKILTISNHPISSD
VDPLHEENYFSMIIQG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 56865; Mature: 56734

Theoretical pI: Translated: 6.08; Mature: 6.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTINSNSLWAEQPEPLSIALSPPFSSINLQKASLVDKANSFEKTNEDFISSITPSDLPTL
CCCCCCCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCC
IEPNSLTLQTTSLQKLLEKKVQGATEIVEEALKLLNPNLTEKTNNTLSKEVIEMKDSLQT
CCCCCCEEEHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHH
FLKLMDTALTHFHPIRSKMDFLETYDSRALVNAILRLSEIRVRFSRENNSFQSLFKTLPA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCH
AQIKILAPLIKFTFEEICQPLLKLNEEKKVLGHDGKINEDHMDTFKLFWKSFLNKEISFE
HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCH
QKEIHPLIAQNLSFLPLPQLANKMLSEWLLESSLLKPNSKEKETLVTNSPVEFNILPFDI
HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCEEEEECCCH
QQTLDLLLIKIIIHQALGFVMIHQINPLFDPFDFGLQVIHQWLKERIAELLTNDIDGYTS
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH
LGTALEKNLIKKSLIVFALIISIGYAEQSHSSRIKIAQTLKKIASHSTLHEPFFYANAAL
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHCHHE
ILIQGCEKEGNQLRIQQFIRYLAKETEINGEDMEKWRVLQYLLIEMLKKILTISNHPISS
EEEECCCCCCCEEHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
DVDPLHEENYFSMIIQG
CCCCCCCCCHHEEEECC
>Mature Secondary Structure 
TINSNSLWAEQPEPLSIALSPPFSSINLQKASLVDKANSFEKTNEDFISSITPSDLPTL
CCCCCCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCC
IEPNSLTLQTTSLQKLLEKKVQGATEIVEEALKLLNPNLTEKTNNTLSKEVIEMKDSLQT
CCCCCCEEEHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHH
FLKLMDTALTHFHPIRSKMDFLETYDSRALVNAILRLSEIRVRFSRENNSFQSLFKTLPA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCH
AQIKILAPLIKFTFEEICQPLLKLNEEKKVLGHDGKINEDHMDTFKLFWKSFLNKEISFE
HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCH
QKEIHPLIAQNLSFLPLPQLANKMLSEWLLESSLLKPNSKEKETLVTNSPVEFNILPFDI
HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCEEEEECCCH
QQTLDLLLIKIIIHQALGFVMIHQINPLFDPFDFGLQVIHQWLKERIAELLTNDIDGYTS
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH
LGTALEKNLIKKSLIVFALIISIGYAEQSHSSRIKIAQTLKKIASHSTLHEPFFYANAAL
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHCHHE
ILIQGCEKEGNQLRIQQFIRYLAKETEINGEDMEKWRVLQYLLIEMLKKILTISNHPISS
EEEECCCCCCCEEHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
DVDPLHEENYFSMIIQG
CCCCCCCCCHHEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA