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The map label for this gene is lcrH

Identifier: 46447159

GI number: 46447159

Start: 1829638

End: 1830177

Strand: Direct

Name: lcrH

Synonym: pc1525

Alternate gene names: NA

Gene position: 1829638-1830177 (Clockwise)

Preceding gene: 46447155

Following gene: 46447160

Centisome position: 75.78

GC content: 33.33

Gene sequence:

>540_bases
ATGGAAATACTTTTTATGAAAACTCATCGGCATGTCGATTTAGAAAAATTGGAGGAAATTAAGCGTATTTGCTTTTTACA
TCTTCTGGAAGATGGATTATTATCAAAAAGTTCTTTTGATTTAGATCCAGAAAAAATGACAAAGCTTTACTCTAGAGCCT
ATCAATTATATACGGCTGGTAAATTTCAAAACGCTCAAGCAATATTTAGTTTGTTAGCTCTTGTAGAATATAATGAATTT
AATTTTATTTACGGTTGGGCAAGCTGCTGTTTGATGTTGAAAGAATATGAAAAAGCAGCTGAAGGTTACATTCGATGTGG
AATGCTTGATCTTAAAAACCCTCTTCCTTACTTTTATGCAGCAGACTGTTATTTGAATAAACAGGAACGAGTTTCAGCAT
GTATTGCACTGCAGATTGTGATTAGACGAGCGCAATTAAATTCTCAATACTCTGAAATTCAAAAACGAGCGGAGATGACA
TTAGAAACATTAATGCCTAGTCAACAAAAAACAAAACAGCCGAGGCATCATGACTATTAA

Upstream 100 bases:

>100_bases
TTTCAAGCTCTTTATTGTGCTAATATTTTTTTTAAAATATAATTAATATAAAGAAGTATAACTTTTTTTTCCTTTGCAAT
TTGCTTGAATGAAACTAAAA

Downstream 100 bases:

>100_bases
TTCTAACTCTCTCTGGGCTGAACAACCAGAGCCTTTATCTATAGCTCTTTCACCTCCATTTTCTTCTATAAATTTACAAA
AAGCTTCTCTTGTTGATAAA

Product: putative regulatory protein lcrH and chaperone sycD

Products: NA

Alternate protein names: LcrH/SycD Chaperone Family Protein; Type III Secretion Chaperone SycD/LcrH; Regulatory Protein LcrH And Chaperone SycD

Number of amino acids: Translated: 179; Mature: 179

Protein sequence:

>179_residues
MEILFMKTHRHVDLEKLEEIKRICFLHLLEDGLLSKSSFDLDPEKMTKLYSRAYQLYTAGKFQNAQAIFSLLALVEYNEF
NFIYGWASCCLMLKEYEKAAEGYIRCGMLDLKNPLPYFYAADCYLNKQERVSACIALQIVIRRAQLNSQYSEIQKRAEMT
LETLMPSQQKTKQPRHHDY

Sequences:

>Translated_179_residues
MEILFMKTHRHVDLEKLEEIKRICFLHLLEDGLLSKSSFDLDPEKMTKLYSRAYQLYTAGKFQNAQAIFSLLALVEYNEF
NFIYGWASCCLMLKEYEKAAEGYIRCGMLDLKNPLPYFYAADCYLNKQERVSACIALQIVIRRAQLNSQYSEIQKRAEMT
LETLMPSQQKTKQPRHHDY
>Mature_179_residues
MEILFMKTHRHVDLEKLEEIKRICFLHLLEDGLLSKSSFDLDPEKMTKLYSRAYQLYTAGKFQNAQAIFSLLALVEYNEF
NFIYGWASCCLMLKEYEKAAEGYIRCGMLDLKNPLPYFYAADCYLNKQERVSACIALQIVIRRAQLNSQYSEIQKRAEMT
LETLMPSQQKTKQPRHHDY

Specific function: Unknown

COG id: COG0457

COG function: function code R; FOG: TPR repeat

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21087; Mature: 21087

Theoretical pI: Translated: 7.81; Mature: 7.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.4 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
7.3 %Cys+Met (Translated Protein)
3.4 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
7.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEILFMKTHRHVDLEKLEEIKRICFLHLLEDGLLSKSSFDLDPEKMTKLYSRAYQLYTAG
CEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCC
KFQNAQAIFSLLALVEYNEFNFIYGWASCCLMLKEYEKAAEGYIRCGMLDLKNPLPYFYA
CCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCEEE
ADCYLNKQERVSACIALQIVIRRAQLNSQYSEIQKRAEMTLETLMPSQQKTKQPRHHDY
HHHEECHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCC
>Mature Secondary Structure
MEILFMKTHRHVDLEKLEEIKRICFLHLLEDGLLSKSSFDLDPEKMTKLYSRAYQLYTAG
CEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCC
KFQNAQAIFSLLALVEYNEFNFIYGWASCCLMLKEYEKAAEGYIRCGMLDLKNPLPYFYA
CCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCEEE
ADCYLNKQERVSACIALQIVIRRAQLNSQYSEIQKRAEMTLETLMPSQQKTKQPRHHDY
HHHEECHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA