Definition Candidatus Protochlamydia amoebophila UWE25, complete genome.
Accession NC_005861
Length 2,414,465

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The map label for this gene is 46445975

Identifier: 46445975

GI number: 46445975

Start: 464614

End: 465414

Strand: Direct

Name: 46445975

Synonym: pc0341

Alternate gene names: NA

Gene position: 464614-465414 (Clockwise)

Preceding gene: 46445974

Following gene: 46445979

Centisome position: 19.24

GC content: 34.71

Gene sequence:

>801_bases
ATGGCATATATGGATTGTCTCGCTTATTGCACAGCATCTTCCTATCAAATTAAACCCTTATTTGAAAGTTTAAAACACCA
AGGAGCTACTCTTTATCGTGATGTAGTTCATCTTCCCATACCAGGAATTTCGATCGGGGATATATTTTATTTTTCTTATG
GGGCTACTGTTTGTTGGGGGGTAACTCCAGATCAATGTCAACAATTTTTAGATCAAGCTAAAGCTTATGAAGAGCAGCCA
TTAATTCCGGAGGAAATGGATATTGATGAATTTACTTTTACATTTGGAGACGTTCCAAAAATTATTGAAGATGAAATTAT
TCTTCCTAATCGAGATGTTTTAAATCGCTTGGCCATTTCTCACGGATTAGCCCAATCTGTTAAGTTAGGGACTTTCGAGC
ATGCAATTCGTCGCACATTTCAATTCACTAAGCGAATTCCTCAAGATTTGGCGAAGCAGGGAAAAATTCCTCTTTCAAGA
AAAGAAATTAGAAAGAAGATGGGGGCATTATTTATAGAGCGTAACTCCATCAACTTACATCTAGATATTTTGGATACACC
AGAATTTTTTTGGGAATATTCTGAGTTAGAACCGCTTTACGCAATGACAAATAATTATCTAGATATTGATACAAGAGTGG
AAGTCTTAAATCAAAGATTAGATGTCATGCATGAATTGTTTGAAATGCTCGGAAACGAACTTAATCATCAGCATTCTAGC
CGATTAGAATGGACAATTATTTGTTTAATTGTGATTGAAGTTTTTCTATCTATATGGCGAGATGTATTTCATTTTATTTA
G

Upstream 100 bases:

>100_bases
TTATTCATTCAAAGCAATTAGTCTTTGGTACTGCATCATTAAGATGTTTATCGATCAATTATGAAAGCTTTTGCTAAATG
GCATAAAATATAAATAACTA

Downstream 100 bases:

>100_bases
GGCATTTTCGCAGAAAAAGTGAGAAAAATACGACTATAAAAATTAATTAATGAAGAGAGGCGATCCTTAATTCGTCAAAT
ACTCCTCGAACGGGTAACAC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 266; Mature: 265

Protein sequence:

>266_residues
MAYMDCLAYCTASSYQIKPLFESLKHQGATLYRDVVHLPIPGISIGDIFYFSYGATVCWGVTPDQCQQFLDQAKAYEEQP
LIPEEMDIDEFTFTFGDVPKIIEDEIILPNRDVLNRLAISHGLAQSVKLGTFEHAIRRTFQFTKRIPQDLAKQGKIPLSR
KEIRKKMGALFIERNSINLHLDILDTPEFFWEYSELEPLYAMTNNYLDIDTRVEVLNQRLDVMHELFEMLGNELNHQHSS
RLEWTIICLIVIEVFLSIWRDVFHFI

Sequences:

>Translated_266_residues
MAYMDCLAYCTASSYQIKPLFESLKHQGATLYRDVVHLPIPGISIGDIFYFSYGATVCWGVTPDQCQQFLDQAKAYEEQP
LIPEEMDIDEFTFTFGDVPKIIEDEIILPNRDVLNRLAISHGLAQSVKLGTFEHAIRRTFQFTKRIPQDLAKQGKIPLSR
KEIRKKMGALFIERNSINLHLDILDTPEFFWEYSELEPLYAMTNNYLDIDTRVEVLNQRLDVMHELFEMLGNELNHQHSS
RLEWTIICLIVIEVFLSIWRDVFHFI
>Mature_265_residues
AYMDCLAYCTASSYQIKPLFESLKHQGATLYRDVVHLPIPGISIGDIFYFSYGATVCWGVTPDQCQQFLDQAKAYEEQPL
IPEEMDIDEFTFTFGDVPKIIEDEIILPNRDVLNRLAISHGLAQSVKLGTFEHAIRRTFQFTKRIPQDLAKQGKIPLSRK
EIRKKMGALFIERNSINLHLDILDTPEFFWEYSELEPLYAMTNNYLDIDTRVEVLNQRLDVMHELFEMLGNELNHQHSSR
LEWTIICLIVIEVFLSIWRDVFHFI

Specific function: Unknown

COG id: COG1723

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI157388927, Length=280, Percent_Identity=32.5, Blast_Score=135, Evalue=3e-32,
Organism=Caenorhabditis elegans, GI71996861, Length=240, Percent_Identity=35, Blast_Score=107, Evalue=9e-24,
Organism=Saccharomyces cerevisiae, GI6320203, Length=289, Percent_Identity=37.7162629757785, Blast_Score=181, Evalue=8e-47,
Organism=Saccharomyces cerevisiae, GI6321163, Length=222, Percent_Identity=34.6846846846847, Blast_Score=122, Evalue=6e-29,
Organism=Saccharomyces cerevisiae, GI6320488, Length=292, Percent_Identity=26.7123287671233, Blast_Score=100, Evalue=4e-22,
Organism=Drosophila melanogaster, GI18859701, Length=306, Percent_Identity=26.797385620915, Blast_Score=119, Evalue=2e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31042; Mature: 30911

Theoretical pI: Translated: 4.82; Mature: 4.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAYMDCLAYCTASSYQIKPLFESLKHQGATLYRDVVHLPIPGISIGDIFYFSYGATVCWG
CHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHHHHHHCCCCCCCHHHHHHHHCCCEEEEC
VTPDQCQQFLDQAKAYEEQPLIPEEMDIDEFTFTFGDVPKIIEDEIILPNRDVLNRLAIS
CCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHEECCCCCCHHHCCCCCCCCHHHHHHHHHH
HGLAQSVKLGTFEHAIRRTFQFTKRIPQDLAKQGKIPLSRKEIRKKMGALFIERNSINLH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHEEEEECCCEEE
LDILDTPEFFWEYSELEPLYAMTNNYLDIDTRVEVLNQRLDVMHELFEMLGNELNHQHSS
EEEECCHHHHHHHHHCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCC
RLEWTIICLIVIEVFLSIWRDVFHFI
CHHHHHHHHHHHHHHHHHHHHHHHHC
>Mature Secondary Structure 
AYMDCLAYCTASSYQIKPLFESLKHQGATLYRDVVHLPIPGISIGDIFYFSYGATVCWG
HHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHHHHHHCCCCCCCHHHHHHHHCCCEEEEC
VTPDQCQQFLDQAKAYEEQPLIPEEMDIDEFTFTFGDVPKIIEDEIILPNRDVLNRLAIS
CCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHEECCCCCCHHHCCCCCCCCHHHHHHHHHH
HGLAQSVKLGTFEHAIRRTFQFTKRIPQDLAKQGKIPLSRKEIRKKMGALFIERNSINLH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHEEEEECCCEEE
LDILDTPEFFWEYSELEPLYAMTNNYLDIDTRVEVLNQRLDVMHELFEMLGNELNHQHSS
EEEECCHHHHHHHHHCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCC
RLEWTIICLIVIEVFLSIWRDVFHFI
CHHHHHHHHHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA