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The map label for this gene is recO [H]

Identifier: 46445974

GI number: 46445974

Start: 463657

End: 464352

Strand: Direct

Name: recO [H]

Synonym: pc0340

Alternate gene names: 46445974

Gene position: 463657-464352 (Clockwise)

Preceding gene: 46445966

Following gene: 46445975

Centisome position: 19.2

GC content: 32.47

Gene sequence:

>696_bases
ATGTTATCAGAATTTCAAACGGCTGAAGGTATTATTTTAAAAGTCATTCCTTTTCGTGATTATGATCAGATTTTAGCCAT
TTTTACTAAGGAAGCTGGCTTAATCAAAGTTTTATGCAAAAAGAGTCGAAATAAAAAAGGAGGGGCAAAGAGTCATTACA
CGCCTTTAACAAAGGTGGAATTGGTTTATAAAGAACAAAAAGGTGAAATTTTTAATTGTCATGAAATATCAATTTTAGAT
TTTTACCGTCATTTACGGACCGAACTCAGTCATTTAAATGCTGCTTGTGACATCATACAGCTTCTTTACCAGACGCAATT
AGTAGGAAAGCCTGCTCCTCGACTTTTTACTTTGACTGAAATTTATTTGAAAAAAATTCCCCAAACCCAATTTCCGGATA
TTTTAACCACAAGCTTCCGTTTAAAACTACTAAAGCATGAAGGAATTTTAGCCCATCCTTTGGTCTGCAGTGTTTGCCTA
CAACCACTTCATCAAGAAGCTTTTTTTTTTCGAGGGGAAGTATTTTGTCGTTTACACTATCCTATGGGAGCCAGCCATTT
ACGTGAAAACGAAATAAATGTATTATATCAATTATTGAATTGTAAAAATTATCAAGAATTAACTGAAATTACTCTTTTTT
CTCAAACAAAAAACAAAATTGAGAGATATTGCAAAGAAACTATGCAAAAACAGTAA

Upstream 100 bases:

>100_bases
ATCCATTGAGCTATCGGTGCGATAAGAATTAATGCATTTTAACAGCTAAGAGATTAGACTATAGAATTTTGAAGATTATA
AGTCAAAAAGTATTGATATT

Downstream 100 bases:

>100_bases
AATCTATTTGCCTCTATAGCTTAAAAGTGTTAAAATTTTTTTCTTATCTATGCGAAGGTGGCGGAATTGGTATACGCGCT
ACTTTGAGGTGGTAGTGAGG

Product: DNA repair protein RecO

Products: NA

Alternate protein names: Recombination protein O [H]

Number of amino acids: Translated: 231; Mature: 231

Protein sequence:

>231_residues
MLSEFQTAEGIILKVIPFRDYDQILAIFTKEAGLIKVLCKKSRNKKGGAKSHYTPLTKVELVYKEQKGEIFNCHEISILD
FYRHLRTELSHLNAACDIIQLLYQTQLVGKPAPRLFTLTEIYLKKIPQTQFPDILTTSFRLKLLKHEGILAHPLVCSVCL
QPLHQEAFFFRGEVFCRLHYPMGASHLRENEINVLYQLLNCKNYQELTEITLFSQTKNKIERYCKETMQKQ

Sequences:

>Translated_231_residues
MLSEFQTAEGIILKVIPFRDYDQILAIFTKEAGLIKVLCKKSRNKKGGAKSHYTPLTKVELVYKEQKGEIFNCHEISILD
FYRHLRTELSHLNAACDIIQLLYQTQLVGKPAPRLFTLTEIYLKKIPQTQFPDILTTSFRLKLLKHEGILAHPLVCSVCL
QPLHQEAFFFRGEVFCRLHYPMGASHLRENEINVLYQLLNCKNYQELTEITLFSQTKNKIERYCKETMQKQ
>Mature_231_residues
MLSEFQTAEGIILKVIPFRDYDQILAIFTKEAGLIKVLCKKSRNKKGGAKSHYTPLTKVELVYKEQKGEIFNCHEISILD
FYRHLRTELSHLNAACDIIQLLYQTQLVGKPAPRLFTLTEIYLKKIPQTQFPDILTTSFRLKLLKHEGILAHPLVCSVCL
QPLHQEAFFFRGEVFCRLHYPMGASHLRENEINVLYQLLNCKNYQELTEITLFSQTKNKIERYCKETMQKQ

Specific function: Involved in DNA repair and recF pathway recombination [H]

COG id: COG1381

COG function: function code L; Recombinational DNA repair protein (RecF pathway)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the recO family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001164
- InterPro:   IPR022572
- InterPro:   IPR016027
- InterPro:   IPR003717 [H]

Pfam domain/function: PF02565 RecO; PF11967 RecO_N [H]

EC number: NA

Molecular weight: Translated: 26953; Mature: 26953

Theoretical pI: Translated: 9.03; Mature: 9.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.5 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
3.5 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSEFQTAEGIILKVIPFRDYDQILAIFTKEAGLIKVLCKKSRNKKGGAKSHYTPLTKVE
CCCCCCCCCCEEEEEECCCCHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCCHHHH
LVYKEQKGEIFNCHEISILDFYRHLRTELSHLNAACDIIQLLYQTQLVGKPAPRLFTLTE
EEEECCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHH
IYLKKIPQTQFPDILTTSFRLKLLKHEGILAHPLVCSVCLQPLHQEAFFFRGEVFCRLHY
HHHHHCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEC
PMGASHLRENEINVLYQLLNCKNYQELTEITLFSQTKNKIERYCKETMQKQ
CCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MLSEFQTAEGIILKVIPFRDYDQILAIFTKEAGLIKVLCKKSRNKKGGAKSHYTPLTKVE
CCCCCCCCCCEEEEEECCCCHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCCHHHH
LVYKEQKGEIFNCHEISILDFYRHLRTELSHLNAACDIIQLLYQTQLVGKPAPRLFTLTE
EEEECCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHH
IYLKKIPQTQFPDILTTSFRLKLLKHEGILAHPLVCSVCLQPLHQEAFFFRGEVFCRLHY
HHHHHCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEC
PMGASHLRENEINVLYQLLNCKNYQELTEITLFSQTKNKIERYCKETMQKQ
CCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA