| Definition | Candidatus Protochlamydia amoebophila UWE25, complete genome. |
|---|---|
| Accession | NC_005861 |
| Length | 2,414,465 |
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The map label for this gene is 46445662
Identifier: 46445662
GI number: 46445662
Start: 43555
End: 43917
Strand: Direct
Name: 46445662
Synonym: pc0028
Alternate gene names: NA
Gene position: 43555-43917 (Clockwise)
Preceding gene: 46445661
Following gene: 46445667
Centisome position: 1.8
GC content: 31.13
Gene sequence:
>363_bases ATGCTCTTAACAAGCACTTTCTTAAATTTTTCAGTGAATCAACCAAAATTTTTATCTGATTTTGTTAACAGATCGAAAGA CTATTTCAAGTTTGATTTAGCTAACCGTGTGAAGCAAATTGCAAAAGAGATTTTTTCAAAATTTTCTGAGACAATACAAA AAAATAATAATAACAATCAACGTTCCAATCAAAATAGCGTCAAAGGAATTTCGATGCTTTTTTGCGTAACAATAATTTTA TTACTTTTTAATTCTTTTTTTCGCCGCTCAGACTCTTCATTTCCTCTACCTACTCCAAAGATGAGATGTGACGATAATCT ACCTAGTGGAAAAATTAATAAGCGCAGAGCGGCACAGATTTAG
Upstream 100 bases:
>100_bases CAGCAATTGAATGAGATTTTTGGTAAATAAAAAAAGCAGGGTCTTATTGTAATAAATAAAAGATATTGATATAGTTTTTA TTAACTAGTAAGGTGGTTAT
Downstream 100 bases:
>100_bases ATTAAACCCAATAGTTTAAGGATGGCTATTACTCCTACGGGCACGCCTAAAATCCAAAGAAGTGCCATTCTTCCTAATCC CATATCTATTCTCCTGTTTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 120; Mature: 120
Protein sequence:
>120_residues MLLTSTFLNFSVNQPKFLSDFVNRSKDYFKFDLANRVKQIAKEIFSKFSETIQKNNNNNQRSNQNSVKGISMLFCVTIIL LLFNSFFRRSDSSFPLPTPKMRCDDNLPSGKINKRRAAQI
Sequences:
>Translated_120_residues MLLTSTFLNFSVNQPKFLSDFVNRSKDYFKFDLANRVKQIAKEIFSKFSETIQKNNNNNQRSNQNSVKGISMLFCVTIIL LLFNSFFRRSDSSFPLPTPKMRCDDNLPSGKINKRRAAQI >Mature_120_residues MLLTSTFLNFSVNQPKFLSDFVNRSKDYFKFDLANRVKQIAKEIFSKFSETIQKNNNNNQRSNQNSVKGISMLFCVTIIL LLFNSFFRRSDSSFPLPTPKMRCDDNLPSGKINKRRAAQI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13923; Mature: 13923
Theoretical pI: Translated: 11.02; Mature: 11.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLLTSTFLNFSVNQPKFLSDFVNRSKDYFKFDLANRVKQIAKEIFSKFSETIQKNNNNNQ CCCCCCHHCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC RSNQNSVKGISMLFCVTIILLLFNSFFRRSDSSFPLPTPKMRCDDNLPSGKINKRRAAQI CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCC >Mature Secondary Structure MLLTSTFLNFSVNQPKFLSDFVNRSKDYFKFDLANRVKQIAKEIFSKFSETIQKNNNNNQ CCCCCCHHCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC RSNQNSVKGISMLFCVTIILLLFNSFFRRSDSSFPLPTPKMRCDDNLPSGKINKRRAAQI CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA