The gene/protein map for NC_011027 is currently unavailable.
Definition Bdellovibrio bacteriovorus HD100, complete genome.
Accession NC_005363
Length 3,782,950

Click here to switch to the map view.

The map label for this gene is 42522601

Identifier: 42522601

GI number: 42522601

Start: 988541

End: 989986

Strand: Direct

Name: 42522601

Synonym: Bd1044

Alternate gene names: NA

Gene position: 988541-989986 (Clockwise)

Preceding gene: 42522599

Following gene: 42522602

Centisome position: 26.13

GC content: 52.14

Gene sequence:

>1446_bases
ATGAAGAACACACAATGGGTGGCGGGTTTGCTTGCCGCTGTGACTTTGATTCAGGCCTCAGCTCACGCTGAGATTATTTC
GGACCTGCCGGGCTTTGAGGACGGTGGTTCTCAAGGACAGACGTTCCGTCCGCCTGCTCCGCCGATGCCCAATGAAGGTG
TAACCCGCCAATATACGGATGTGGCGAACCTGGATCAGATCAGTCGCAAATCCGGCGGGGAAGCCTATCGCTTTAATCTG
GTGCAGCCTACAAATCTGAAGTACCTGGAACTGACGGTGCAATCCAGCCGTCTGAAAATTCATGAAGCCACTGTTCTGAC
CGTGGGCGGTCAGCGCTACATGATCCGTGAATTCCATAACAGCAATGTTCTGGAGACCGGCACCCAGTTGACTTCTGAAA
ACCTGAATATCAATGACGACATCCGCACTATTGAGCTGCGTATGGAGTCTTATTCCCATGCCGCGACGATTTCTTTGAAA
GCCGTGGGGGACAGAGCTGTTCCCCGCATGTCTGTGCAACGCCCTGTGATTGTGGCTCCGCCGTCACAGCCGAATCGTCC
GACTCAGCCAAGCCGTCCTGTGGATGTTCGTTTGAGATCCGGTGACGTGGTGGTGTCTGTAAGTTCTCAAGGCAAATACT
ATGACGGCCGTGTTGTCGAAGTTTATGGCAATGGCAAAGTCCTGGTTCGTGACGAGGACGACGGCAAAACTTACGTTCGT
GATATTTCCTCTGTGGGTAAACGTATTTCCTGTGCTTCCAATGGCCTGTGCGAAGGTGAGGAAGTCATGGCCTATCCAGT
GGGTTCTCAAGCCAAGACCTATCTGGGTAAGATCGTTGCGATCTATTCCAACGACATGGTGAAGATGCGTGACTCTGATG
ATTCCAAGGACTATTTCCGCGATCTCAAGATCATTCACCGCCGCTTGAACTGTCTGGAGTCCCTGTGTGTGAAAGACCGT
GTTCTTTCCCGTTCCGGTGACGGCACCAAGTACTATGGTGGCGTTATCGACTCCATCTACTCCAATGGTGTGATCGCTGT
TCGTGACGATGATGACGGCAAGGTTTATTCCCGTAATAAAGAGGTCGTTTTTAAGTCCGTACAATGCCACAGTTCAGGTC
TTTGCATTAAAGACCGTGTGATGTCGAAGTCCGGTGACAAGTACTACTTCGGTTCCGTGACGGGTGTTTATTCAAATGGC
CTGATCTATGTGCGCGATGACGACGATGGTAAGTCCTATGCTCGTCAGCACGATGTTGTCTTTAAAGAGATCAGATGTGC
CAACGGGTTCTGCCGCGGGGACCGTGTTCTGTCCACTCTGAGCAATGGCCGCTACTATACAGGCCGTGTGGAAGGGGCTT
ATGCCGGCGGTTTGATCTCGGTTCGAGATGACGACGACGGTAAGGTGTATCTGCGCCCTCATACGGTCCTGTCTCGCGCC
AGATAG

Upstream 100 bases:

>100_bases
TAAAAAATGCCCAGCTCAAAATTAGAGCTTATTTAGGAACCATTGTGGAGGCACGAACTTTGGACTGATCCGCACTGTCT
ATTAAAACAGGAGCGTCTTT

Downstream 100 bases:

>100_bases
TCGGAAGCGCCCTTGGGCGCCCCCTGTCCAACAATGAGACAGTTGACCAGCTTTATATCAAATTTATCTGTGTTTGAGGC
CGCCCGCAGGCGGCACGAAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 481; Mature: 481

Protein sequence:

>481_residues
MKNTQWVAGLLAAVTLIQASAHAEIISDLPGFEDGGSQGQTFRPPAPPMPNEGVTRQYTDVANLDQISRKSGGEAYRFNL
VQPTNLKYLELTVQSSRLKIHEATVLTVGGQRYMIREFHNSNVLETGTQLTSENLNINDDIRTIELRMESYSHAATISLK
AVGDRAVPRMSVQRPVIVAPPSQPNRPTQPSRPVDVRLRSGDVVVSVSSQGKYYDGRVVEVYGNGKVLVRDEDDGKTYVR
DISSVGKRISCASNGLCEGEEVMAYPVGSQAKTYLGKIVAIYSNDMVKMRDSDDSKDYFRDLKIIHRRLNCLESLCVKDR
VLSRSGDGTKYYGGVIDSIYSNGVIAVRDDDDGKVYSRNKEVVFKSVQCHSSGLCIKDRVMSKSGDKYYFGSVTGVYSNG
LIYVRDDDDGKSYARQHDVVFKEIRCANGFCRGDRVLSTLSNGRYYTGRVEGAYAGGLISVRDDDDGKVYLRPHTVLSRA
R

Sequences:

>Translated_481_residues
MKNTQWVAGLLAAVTLIQASAHAEIISDLPGFEDGGSQGQTFRPPAPPMPNEGVTRQYTDVANLDQISRKSGGEAYRFNL
VQPTNLKYLELTVQSSRLKIHEATVLTVGGQRYMIREFHNSNVLETGTQLTSENLNINDDIRTIELRMESYSHAATISLK
AVGDRAVPRMSVQRPVIVAPPSQPNRPTQPSRPVDVRLRSGDVVVSVSSQGKYYDGRVVEVYGNGKVLVRDEDDGKTYVR
DISSVGKRISCASNGLCEGEEVMAYPVGSQAKTYLGKIVAIYSNDMVKMRDSDDSKDYFRDLKIIHRRLNCLESLCVKDR
VLSRSGDGTKYYGGVIDSIYSNGVIAVRDDDDGKVYSRNKEVVFKSVQCHSSGLCIKDRVMSKSGDKYYFGSVTGVYSNG
LIYVRDDDDGKSYARQHDVVFKEIRCANGFCRGDRVLSTLSNGRYYTGRVEGAYAGGLISVRDDDDGKVYLRPHTVLSRA
R
>Mature_481_residues
MKNTQWVAGLLAAVTLIQASAHAEIISDLPGFEDGGSQGQTFRPPAPPMPNEGVTRQYTDVANLDQISRKSGGEAYRFNL
VQPTNLKYLELTVQSSRLKIHEATVLTVGGQRYMIREFHNSNVLETGTQLTSENLNINDDIRTIELRMESYSHAATISLK
AVGDRAVPRMSVQRPVIVAPPSQPNRPTQPSRPVDVRLRSGDVVVSVSSQGKYYDGRVVEVYGNGKVLVRDEDDGKTYVR
DISSVGKRISCASNGLCEGEEVMAYPVGSQAKTYLGKIVAIYSNDMVKMRDSDDSKDYFRDLKIIHRRLNCLESLCVKDR
VLSRSGDGTKYYGGVIDSIYSNGVIAVRDDDDGKVYSRNKEVVFKSVQCHSSGLCIKDRVMSKSGDKYYFGSVTGVYSNG
LIYVRDDDDGKSYARQHDVVFKEIRCANGFCRGDRVLSTLSNGRYYTGRVEGAYAGGLISVRDDDDGKVYLRPHTVLSRA
R

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 53275; Mature: 53275

Theoretical pI: Translated: 8.62; Mature: 8.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNTQWVAGLLAAVTLIQASAHAEIISDLPGFEDGGSQGQTFRPPAPPMPNEGVTRQYTD
CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHC
VANLDQISRKSGGEAYRFNLVQPTNLKYLELTVQSSRLKIHEATVLTVGGQRYMIREFHN
CCCHHHHHHCCCCCEEEEEEECCCCCEEEEEEEECCEEEEEEEEEEEECCCEEEEEECCC
SNVLETGTQLTSENLNINDDIRTIELRMESYSHAATISLKAVGDRAVPRMSVQRPVIVAP
CCCCCCCCEECCCCCCCCCCEEEEEEEECCCCCEEEEEEEECCCCCCCCCCCCCCEEECC
PSQPNRPTQPSRPVDVRLRSGDVVVSVSSQGKYYDGRVVEVYGNGKVLVRDEDDGKTYVR
CCCCCCCCCCCCCEEEEEECCCEEEEECCCCCEECCEEEEEECCCEEEEEECCCCHHHHH
DISSVGKRISCASNGLCEGEEVMAYPVGSQAKTYLGKIVAIYSNDMVKMRDSDDSKDYFR
HHHHHCCEEECCCCCCCCCCCEEEEECCCHHHHHHHEEEEEECCCEEEECCCCCHHHHHH
DLKIIHRRLNCLESLCVKDRVLSRSGDGTKYYGGVIDSIYSNGVIAVRDDDDGKVYSRNK
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHCCCEEEEEECCCCCEEECCC
EVVFKSVQCHSSGLCIKDRVMSKSGDKYYFGSVTGVYSNGLIYVRDDDDGKSYARQHDVV
EEEEEEEEECCCCCEEHHHHHCCCCCEEEEECEEEEECCCEEEEEECCCCHHHHHHHHHH
FKEIRCANGFCRGDRVLSTLSNGRYYTGRVEGAYAGGLISVRDDDDGKVYLRPHTVLSRA
HHHHHHCCCCCCHHHHHHHHCCCCEEEEEECCEECCCEEEEEECCCCEEEECCHHHHHCC
R
C
>Mature Secondary Structure
MKNTQWVAGLLAAVTLIQASAHAEIISDLPGFEDGGSQGQTFRPPAPPMPNEGVTRQYTD
CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHC
VANLDQISRKSGGEAYRFNLVQPTNLKYLELTVQSSRLKIHEATVLTVGGQRYMIREFHN
CCCHHHHHHCCCCCEEEEEEECCCCCEEEEEEEECCEEEEEEEEEEEECCCEEEEEECCC
SNVLETGTQLTSENLNINDDIRTIELRMESYSHAATISLKAVGDRAVPRMSVQRPVIVAP
CCCCCCCCEECCCCCCCCCCEEEEEEEECCCCCEEEEEEEECCCCCCCCCCCCCCEEECC
PSQPNRPTQPSRPVDVRLRSGDVVVSVSSQGKYYDGRVVEVYGNGKVLVRDEDDGKTYVR
CCCCCCCCCCCCCEEEEEECCCEEEEECCCCCEECCEEEEEECCCEEEEEECCCCHHHHH
DISSVGKRISCASNGLCEGEEVMAYPVGSQAKTYLGKIVAIYSNDMVKMRDSDDSKDYFR
HHHHHCCEEECCCCCCCCCCCEEEEECCCHHHHHHHEEEEEECCCEEEECCCCCHHHHHH
DLKIIHRRLNCLESLCVKDRVLSRSGDGTKYYGGVIDSIYSNGVIAVRDDDDGKVYSRNK
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHCCCEEEEEECCCCCEEECCC
EVVFKSVQCHSSGLCIKDRVMSKSGDKYYFGSVTGVYSNGLIYVRDDDDGKSYARQHDVV
EEEEEEEEECCCCCEEHHHHHCCCCCEEEEECEEEEECCCEEEEEECCCCHHHHHHHHHH
FKEIRCANGFCRGDRVLSTLSNGRYYTGRVEGAYAGGLISVRDDDDGKVYLRPHTVLSRA
HHHHHHCCCCCCHHHHHHHHCCCCEEEEEECCEECCCEEEEEECCCCEEEECCHHHHHCC
R
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA