Definition Bdellovibrio bacteriovorus HD100, complete genome.
Accession NC_005363
Length 3,782,950

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The map label for this gene is 42522596

Identifier: 42522596

GI number: 42522596

Start: 983798

End: 984982

Strand: Direct

Name: 42522596

Synonym: Bd1038

Alternate gene names: NA

Gene position: 983798-984982 (Clockwise)

Preceding gene: 42522595

Following gene: 42522597

Centisome position: 26.01

GC content: 52.32

Gene sequence:

>1185_bases
TTGCATTTTTCAGCGCTTAATATGAAAAACGTGGTGCGCTCCCTTACCTTTGCGGCTTTGCTTGTCTCTGCTTGGATCCC
GGCCTGGGCCGAGGATTTTTCGTCTATTGAGACGGAAGTCGTCGAGAGCACACTTGAAAAGGCCCAGATCGCCCAGCAGG
ACAAGTTGCTTATTAAGGTAGGCAAGGGCGAGCAGATCTATGAGTTTGAAACGACTCCGGATCGAGAACTGATGAAAGAA
TCTTTAGGATTGAAGATCCCGGAAAAAGTGCGGGAGCAGATTATCGCCCGGGGTGGTTCGGTGGCGGAAGCTGATCCTAT
GGAGCCCTTTGAAAGCCTGCCGGAAGATCGCCGCAAAAAATTCCATGAAATGCGCCTGATGTTTTTGACGAATGCCGCGC
GCATTCTGAATTCCACCAAGTTCGTTTATGGTGCCGGAAGCCTTGTGGGCGACGGTCTGAGTTTTGTGAAAATCAAAGTG
AAAAAAGCCTTCGGAAAAGAGACTGTCGTGGAATCCCACGCCCAAAGATCCTTCCAGGTGCGCAGCCAGCAGGCCGTGCA
GAGCATCCTGCGTGGTTTGGATTACAAGCTGTGGTCCCAGGCACCACTCGTGATTGATTCCAACGAATTTGGTTTGAGTG
TTTCCGCCGGTATTTTGGCTGAAGCGGGCGTTCTGCGCAAAGGCGGCGGCGGAGCTGATGAAATGGGCTTCAGCATTGCC
TTTAACAAAACCAAAAAGGCCTTCGTGTTTGAGATCTTCCATAACTCTGAAAAATTCGACAACACCAAGGCGGCCATCAC
CGTGATAGGTGTGGTTGGAAAAGCCGGTATTACCATGGGCCGCCGTGATGGTGCTGAGTCCCTGAAAGGGACGTCGTTCT
ATCCTCCGGCAATTCCGGGCTACAGTGCCTCTTCGCCCGAATTTTTCTCTTCGGGTTTGAGCTCAAGTCTTGGCTTCCCT
CCGCCCCCTCTGGCGGACCTGTTGACGTTCACCAACCGCTTTGAGCGCCAGGCTTTGATCCGCGTGACTGTGTCACCGTT
GGTCAAGGGCTTCGTCAGAGTCCAAATAGGCGATGTAAAGGGCTCAATGCGCCTTGTTGCAATGCGATTTGTTGACGTCT
ACACCGCAATATCTGACAAAGTCCACTTGGGTGGGCGTCGTGCTTGCGGCCCTGTATTCAACTAA

Upstream 100 bases:

>100_bases
GATCCCATGCAGTGGCGGGCTGGGGCCTGGTGTCTAAGCCTTAGACAGGAAAAACTCGAAGAATCAAATAGTTAGCATTG
CAAAAAGCCCGGTCCTGGGA

Downstream 100 bases:

>100_bases
TCTTTCTTGCGGTGCAAAATGAAATTTATCGTATTTGAGGGGCTGGACGGCTCCGGCAAAAGTTCTTTGATGGCGGCGTT
GGAGCGTGAGCTGCAAAACA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 394; Mature: 394

Protein sequence:

>394_residues
MHFSALNMKNVVRSLTFAALLVSAWIPAWAEDFSSIETEVVESTLEKAQIAQQDKLLIKVGKGEQIYEFETTPDRELMKE
SLGLKIPEKVREQIIARGGSVAEADPMEPFESLPEDRRKKFHEMRLMFLTNAARILNSTKFVYGAGSLVGDGLSFVKIKV
KKAFGKETVVESHAQRSFQVRSQQAVQSILRGLDYKLWSQAPLVIDSNEFGLSVSAGILAEAGVLRKGGGGADEMGFSIA
FNKTKKAFVFEIFHNSEKFDNTKAAITVIGVVGKAGITMGRRDGAESLKGTSFYPPAIPGYSASSPEFFSSGLSSSLGFP
PPPLADLLTFTNRFERQALIRVTVSPLVKGFVRVQIGDVKGSMRLVAMRFVDVYTAISDKVHLGGRRACGPVFN

Sequences:

>Translated_394_residues
MHFSALNMKNVVRSLTFAALLVSAWIPAWAEDFSSIETEVVESTLEKAQIAQQDKLLIKVGKGEQIYEFETTPDRELMKE
SLGLKIPEKVREQIIARGGSVAEADPMEPFESLPEDRRKKFHEMRLMFLTNAARILNSTKFVYGAGSLVGDGLSFVKIKV
KKAFGKETVVESHAQRSFQVRSQQAVQSILRGLDYKLWSQAPLVIDSNEFGLSVSAGILAEAGVLRKGGGGADEMGFSIA
FNKTKKAFVFEIFHNSEKFDNTKAAITVIGVVGKAGITMGRRDGAESLKGTSFYPPAIPGYSASSPEFFSSGLSSSLGFP
PPPLADLLTFTNRFERQALIRVTVSPLVKGFVRVQIGDVKGSMRLVAMRFVDVYTAISDKVHLGGRRACGPVFN
>Mature_394_residues
MHFSALNMKNVVRSLTFAALLVSAWIPAWAEDFSSIETEVVESTLEKAQIAQQDKLLIKVGKGEQIYEFETTPDRELMKE
SLGLKIPEKVREQIIARGGSVAEADPMEPFESLPEDRRKKFHEMRLMFLTNAARILNSTKFVYGAGSLVGDGLSFVKIKV
KKAFGKETVVESHAQRSFQVRSQQAVQSILRGLDYKLWSQAPLVIDSNEFGLSVSAGILAEAGVLRKGGGGADEMGFSIA
FNKTKKAFVFEIFHNSEKFDNTKAAITVIGVVGKAGITMGRRDGAESLKGTSFYPPAIPGYSASSPEFFSSGLSSSLGFP
PPPLADLLTFTNRFERQALIRVTVSPLVKGFVRVQIGDVKGSMRLVAMRFVDVYTAISDKVHLGGRRACGPVFN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 43114; Mature: 43114

Theoretical pI: Translated: 9.96; Mature: 9.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHFSALNMKNVVRSLTFAALLVSAWIPAWAEDFSSIETEVVESTLEKAQIAQQDKLLIKV
CCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEE
GKGEQIYEFETTPDRELMKESLGLKIPEKVREQIIARGGSVAEADPMEPFESLPEDRRKK
CCCCEEEEECCCCHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHCCHHHHHH
FHEMRLMFLTNAARILNSTKFVYGAGSLVGDGLSFVKIKVKKAFGKETVVESHAQRSFQV
HHHHHHHHHHHHHHHHCCCCEEEECCHHHHCCCEEEEEEEHHHCCHHHHHHHHHHHHHHH
RSQQAVQSILRGLDYKLWSQAPLVIDSNEFGLSVSAGILAEAGVLRKGGGGADEMGFSIA
HHHHHHHHHHHHCCHHHHCCCCEEEECCCCCCEEHHHHHHHCCCCCCCCCCCHHCCEEEE
FNKTKKAFVFEIFHNSEKFDNTKAAITVIGVVGKAGITMGRRDGAESLKGTSFYPPAIPG
ECCCCCEEEEEEECCCCCCCCCHHEEEEEEECCCCCCCCCCCCCHHHCCCCCCCCCCCCC
YSASSPEFFSSGLSSSLGFPPPPLADLLTFTNRFERQALIRVTVSPLVKGFVRVQIGDVK
CCCCCCHHHHHCHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCC
GSMRLVAMRFVDVYTAISDKVHLGGRRACGPVFN
CCHHHHHHHHHHHHHHHCCCEECCCCCCCCCCCC
>Mature Secondary Structure
MHFSALNMKNVVRSLTFAALLVSAWIPAWAEDFSSIETEVVESTLEKAQIAQQDKLLIKV
CCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEE
GKGEQIYEFETTPDRELMKESLGLKIPEKVREQIIARGGSVAEADPMEPFESLPEDRRKK
CCCCEEEEECCCCHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHCCHHHHHH
FHEMRLMFLTNAARILNSTKFVYGAGSLVGDGLSFVKIKVKKAFGKETVVESHAQRSFQV
HHHHHHHHHHHHHHHHCCCCEEEECCHHHHCCCEEEEEEEHHHCCHHHHHHHHHHHHHHH
RSQQAVQSILRGLDYKLWSQAPLVIDSNEFGLSVSAGILAEAGVLRKGGGGADEMGFSIA
HHHHHHHHHHHHCCHHHHCCCCEEEECCCCCCEEHHHHHHHCCCCCCCCCCCHHCCEEEE
FNKTKKAFVFEIFHNSEKFDNTKAAITVIGVVGKAGITMGRRDGAESLKGTSFYPPAIPG
ECCCCCEEEEEEECCCCCCCCCHHEEEEEEECCCCCCCCCCCCCHHHCCCCCCCCCCCCC
YSASSPEFFSSGLSSSLGFPPPPLADLLTFTNRFERQALIRVTVSPLVKGFVRVQIGDVK
CCCCCCHHHHHCHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCC
GSMRLVAMRFVDVYTAISDKVHLGGRRACGPVFN
CCHHHHHHHHHHHHHHHCCCEECCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA