| Definition | Bdellovibrio bacteriovorus HD100, complete genome. |
|---|---|
| Accession | NC_005363 |
| Length | 3,782,950 |
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The map label for this gene is 42522595
Identifier: 42522595
GI number: 42522595
Start: 983229
End: 983699
Strand: Direct
Name: 42522595
Synonym: Bd1037
Alternate gene names: NA
Gene position: 983229-983699 (Clockwise)
Preceding gene: 42522592
Following gene: 42522596
Centisome position: 25.99
GC content: 51.59
Gene sequence:
>471_bases ATGAAAAACACGCTTCGTCTGTCTGTGTGCCTATTTTTTGTGCTCCTGTCGGCCTGTACTTCTCAAGAAGGTAAAATCAA AAAGCTCGCAATGGAGCTCGGGGAAAAGAAGTTTCAGGAGCAGCTGAAGATCGAGGCCGATGATTCCATCAAACAATCTG ATTGGCTGAATAAGTCCTATCAGGAATTCATGCTTAAAAAATCCGAGGTGGAGGTCGTGGAGGTCAAGTTTCTGACTGAA ACCAAGGCCACCGCCGTGGTCGTGGTAAATACCTATCCGCCGTCTTTGCGCCTGACTCTGGCGCGAATTGCCGGGGGTAT GGATCCGGGCCGCAGCCGCAGCTTTAACTTTGCTGAAGCCGTCAGCGGAATCGGCAAACAAATCGGGAAGACCCCCGAGC CCGTCGAACTTCCCCTGATCCTGTACAAGTTCAATAAGACTTCCGCCGGCACCTGGGTTGTGGAGTTCTGA
Upstream 100 bases:
>100_bases GCGGTTTTCGTCCACCCCAAAGTGACCTGTTTTGGGCGACATGGTGCGGCATGTCACGAGCCGGTTGAGTCTTCCCGCCT TATTGATCACCATAGAGGTT
Downstream 100 bases:
>100_bases TCCCATGCAGTGGCGGGCTGGGGCCTGGTGTCTAAGCCTTAGACAGGAAAAACTCGAAGAATCAAATAGTTAGCATTGCA AAAAGCCCGGTCCTGGGATT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 156; Mature: 156
Protein sequence:
>156_residues MKNTLRLSVCLFFVLLSACTSQEGKIKKLAMELGEKKFQEQLKIEADDSIKQSDWLNKSYQEFMLKKSEVEVVEVKFLTE TKATAVVVVNTYPPSLRLTLARIAGGMDPGRSRSFNFAEAVSGIGKQIGKTPEPVELPLILYKFNKTSAGTWVVEF
Sequences:
>Translated_156_residues MKNTLRLSVCLFFVLLSACTSQEGKIKKLAMELGEKKFQEQLKIEADDSIKQSDWLNKSYQEFMLKKSEVEVVEVKFLTE TKATAVVVVNTYPPSLRLTLARIAGGMDPGRSRSFNFAEAVSGIGKQIGKTPEPVELPLILYKFNKTSAGTWVVEF >Mature_156_residues MKNTLRLSVCLFFVLLSACTSQEGKIKKLAMELGEKKFQEQLKIEADDSIKQSDWLNKSYQEFMLKKSEVEVVEVKFLTE TKATAVVVVNTYPPSLRLTLARIAGGMDPGRSRSFNFAEAVSGIGKQIGKTPEPVELPLILYKFNKTSAGTWVVEF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17470; Mature: 17470
Theoretical pI: Translated: 9.46; Mature: 9.46
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNTLRLSVCLFFVLLSACTSQEGKIKKLAMELGEKKFQEQLKIEADDSIKQSDWLNKSY CCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCHHH QEFMLKKSEVEVVEVKFLTETKATAVVVVNTYPPSLRLTLARIAGGMDPGRSRSFNFAEA HHHHHCCCCCEEEEEEEEECCCCEEEEEEECCCCCHHHHHHHHHCCCCCCCCCCCCHHHH VSGIGKQIGKTPEPVELPLILYKFNKTSAGTWVVEF HHHHHHHHCCCCCCCCCCEEEEEECCCCCCEEEEEC >Mature Secondary Structure MKNTLRLSVCLFFVLLSACTSQEGKIKKLAMELGEKKFQEQLKIEADDSIKQSDWLNKSY CCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCHHH QEFMLKKSEVEVVEVKFLTETKATAVVVVNTYPPSLRLTLARIAGGMDPGRSRSFNFAEA HHHHHCCCCCEEEEEEEEECCCCEEEEEEECCCCCHHHHHHHHHCCCCCCCCCCCCHHHH VSGIGKQIGKTPEPVELPLILYKFNKTSAGTWVVEF HHHHHHHHCCCCCCCCCCEEEEEECCCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA