Definition Bdellovibrio bacteriovorus HD100, complete genome.
Accession NC_005363
Length 3,782,950

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The map label for this gene is 42521831

Identifier: 42521831

GI number: 42521831

Start: 186743

End: 187702

Strand: Direct

Name: 42521831

Synonym: Bd0201

Alternate gene names: NA

Gene position: 186743-187702 (Clockwise)

Preceding gene: 42521830

Following gene: 42521832

Centisome position: 4.94

GC content: 53.54

Gene sequence:

>960_bases
TTGTTCCTGTTTCTGGCAAGCTGTCAGAACTTAAGAACCCGTGAAGACATCCGCAAAACTCCGCAGCCGACTCCCAGCCG
TCCGGGGGTGACGCAACCGCGTCCTCCGGAAAATGTCGGCACTCCTCCGCCGATGGAATCAGATGAAGAAGACGTGGCTG
AGACGCCACCGCCTCCTCCGGCGCCGGTGATCCCGACAATGCCCAAGATCGGCGTGATCCTGGGTGGCGGCGGGGCCAAG
ACCTACGCGCATATTGGGTTCTTGCATGAACTGCAAAGAGCCAAGGTTCCGGTTTACGCTATTGGTGGAGTTGAGTTTGC
AGCTCCGATGGCGGCCCTTTACGCCAACAAGGAACTGGCCAACGATGTAGAGTGGCAGATGTTCAAGCTGAAGGATGAAG
AGGTTTTGAAAAAATCTCTTCTGGGTGGCGTGAACAAGAATAACGAAGTGACGGTGTTGAAGGACTTTGTCGGTGTGGCT
TTCAACCGCACCAAGGTGGAAGACTTTAAGATTCCTTTTGCCTGTCCGTCCTACAACTTGAAAAAGAATCAGGTTTACCT
GATGAACCGCGGTGGCATCGATCAGTTGATGTACCTGTGCATGGCGTATCCGCCGTTCTTCAAGCCCCACCAAAACAGTG
TGGCGGGGGTTCGCGACATCACGGCTTTGGCCAATTACCTGCGCCAAAAAGGGGCTAACTATATCGTGATGGTCAATGTG
TTGCAGGCTCCGGGGGGTTCAAAACCCTTCACGCTGGAGTCCAGTGCCACCGACAACGTCTTATGGAGTGAAATCGCGGG
ACTGTATAATAAGCCTTTGCCAGGAGTTGACACTGTCATCTCGCTTGATACATCCAGCTATGGTATTATGGATTTCGACA
AGCGTCGTGAGATCATGAACAAGGGCGCAGACTCAGCTGCCCGTCAGTTGAAGGGTCTGACCCGCAAGTGGGGACTTTAG

Upstream 100 bases:

>100_bases
AATGGATTTAAGGTTCTCGACTACTTCCCATCTCCGATTCAGGGAAAGGACGGAAATAATGAGTTCTTTGTTTTTGCCAA
AAAAATCTAGTTGGATTGTC

Downstream 100 bases:

>100_bases
GAGAATTTATGAGCAGAAAACCCATCTATGACATGAACATCTTTTCCGAGAGAAGGAAAAAAGCCGGGGAGCAGATCCCA
GGTGGTGCTTTGGTTGTGGC

Product: alpha-beta hydrolase superfamily protein

Products: NA

Alternate protein names: Patatin-Like Phospholipase; Esterase Of Alpha-Beta Hydrolase Superfamily; Alpha-Beta Hydrolase Superfamily Esterase; Alpha-Beta Hydrolase Superfamily Protein

Number of amino acids: Translated: 319; Mature: 319

Protein sequence:

>319_residues
MFLFLASCQNLRTREDIRKTPQPTPSRPGVTQPRPPENVGTPPPMESDEEDVAETPPPPPAPVIPTMPKIGVILGGGGAK
TYAHIGFLHELQRAKVPVYAIGGVEFAAPMAALYANKELANDVEWQMFKLKDEEVLKKSLLGGVNKNNEVTVLKDFVGVA
FNRTKVEDFKIPFACPSYNLKKNQVYLMNRGGIDQLMYLCMAYPPFFKPHQNSVAGVRDITALANYLRQKGANYIVMVNV
LQAPGGSKPFTLESSATDNVLWSEIAGLYNKPLPGVDTVISLDTSSYGIMDFDKRREIMNKGADSAARQLKGLTRKWGL

Sequences:

>Translated_319_residues
MFLFLASCQNLRTREDIRKTPQPTPSRPGVTQPRPPENVGTPPPMESDEEDVAETPPPPPAPVIPTMPKIGVILGGGGAK
TYAHIGFLHELQRAKVPVYAIGGVEFAAPMAALYANKELANDVEWQMFKLKDEEVLKKSLLGGVNKNNEVTVLKDFVGVA
FNRTKVEDFKIPFACPSYNLKKNQVYLMNRGGIDQLMYLCMAYPPFFKPHQNSVAGVRDITALANYLRQKGANYIVMVNV
LQAPGGSKPFTLESSATDNVLWSEIAGLYNKPLPGVDTVISLDTSSYGIMDFDKRREIMNKGADSAARQLKGLTRKWGL
>Mature_319_residues
MFLFLASCQNLRTREDIRKTPQPTPSRPGVTQPRPPENVGTPPPMESDEEDVAETPPPPPAPVIPTMPKIGVILGGGGAK
TYAHIGFLHELQRAKVPVYAIGGVEFAAPMAALYANKELANDVEWQMFKLKDEEVLKKSLLGGVNKNNEVTVLKDFVGVA
FNRTKVEDFKIPFACPSYNLKKNQVYLMNRGGIDQLMYLCMAYPPFFKPHQNSVAGVRDITALANYLRQKGANYIVMVNV
LQAPGGSKPFTLESSATDNVLWSEIAGLYNKPLPGVDTVISLDTSSYGIMDFDKRREIMNKGADSAARQLKGLTRKWGL

Specific function: Unknown

COG id: COG1752

COG function: function code R; Predicted esterase of the alpha-beta hydrolase superfamily

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35127; Mature: 35127

Theoretical pI: Translated: 9.18; Mature: 9.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFLFLASCQNLRTREDIRKTPQPTPSRPGVTQPRPPENVGTPPPMESDEEDVAETPPPPP
CEEEEECHHCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCC
APVIPTMPKIGVILGGGGAKTYAHIGFLHELQRAKVPVYAIGGVEFAAPMAALYANKELA
CCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHCHHHH
NDVEWQMFKLKDEEVLKKSLLGGVNKNNEVTVLKDFVGVAFNRTKVEDFKIPFACPSYNL
CCCCEEEEECCHHHHHHHHHHCCCCCCCCEEEEHHHHHHHHCCCCHHHEECCEECCCCCC
KKNQVYLMNRGGIDQLMYLCMAYPPFFKPHQNSVAGVRDITALANYLRQKGANYIVMVNV
CCCEEEEECCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEE
LQAPGGSKPFTLESSATDNVLWSEIAGLYNKPLPGVDTVISLDTSSYGIMDFDKRREIMN
EECCCCCCCEEECCCCCCHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCHHHHHHHHH
KGADSAARQLKGLTRKWGL
CCHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MFLFLASCQNLRTREDIRKTPQPTPSRPGVTQPRPPENVGTPPPMESDEEDVAETPPPPP
CEEEEECHHCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCC
APVIPTMPKIGVILGGGGAKTYAHIGFLHELQRAKVPVYAIGGVEFAAPMAALYANKELA
CCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHCHHHH
NDVEWQMFKLKDEEVLKKSLLGGVNKNNEVTVLKDFVGVAFNRTKVEDFKIPFACPSYNL
CCCCEEEEECCHHHHHHHHHHCCCCCCCCEEEEHHHHHHHHCCCCHHHEECCEECCCCCC
KKNQVYLMNRGGIDQLMYLCMAYPPFFKPHQNSVAGVRDITALANYLRQKGANYIVMVNV
CCCEEEEECCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEE
LQAPGGSKPFTLESSATDNVLWSEIAGLYNKPLPGVDTVISLDTSSYGIMDFDKRREIMN
EECCCCCCCEEECCCCCCHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCHHHHHHHHH
KGADSAARQLKGLTRKWGL
CCHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA