| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41409752
Identifier: 41409752
GI number: 41409752
Start: 4058366
End: 4059628
Strand: Direct
Name: 41409752
Synonym: MAP3654
Alternate gene names: NA
Gene position: 4058366-4059628 (Clockwise)
Preceding gene: 41409751
Following gene: 41409754
Centisome position: 84.03
GC content: 73.79
Gene sequence:
>1263_bases GTGGGCGCGCGGATCGAGGAGGTGGCGCCCGCGGATGATGGCCTGGCGGCCAGGGCGGGGGAGGGGGTGCTTTACGCCGG CGGCGGCACCGTGCTGCCCGGGCTGCACGACCACCACGTGCACCTGCGCTCGGCTGCCTCGGCGCTGGATTCGTTCTTCG TCGGGCCGCCCGGCGTCAGCACCCGCGCCGAGCTCACCCGGCTGCTGGCCAACGCCACGCCCGGACCCGACGGGTGGATC CGCGCCGTGGGCTATCACGATTCGGTCGCCGGCGCGCTCGACCGGACCGCGCTGGATGCCATCGTGCGCGACGTCCCGGT CCGCATCCAGCACCGCAGCGGCGCGCTGTGGATCCTCAATTCCGAGGCGCTGGGCCGGATCGGGCTGGCCGAACACCCGG ACGGGCGGCTGCGCAGCGCCGACCGCGGCTGGTCGCAGGCGCTGGCGCACCGGGAGACCGACCTGGCCGAGCTCAGCCGC CGGATCACCGCGACCGGCGTCACCGGCGTCACCGACGCCACCCCCGACCTGGACGACGACGACCGGGCCGCGCTGGCCGC CGCCCACGCGCGCGGCGAATTCCGGCCCCGGCCCAGCTTCCTCTCGCCGGGCAAGAAGATCCTGCACGACGACCGCCTCG ACCTCGACGCCCTCACGGAATGGGTTGCCGGACAGCACGACACGGGCCAGCCGGTCGCCGTGCACTGCGTCACCGCCGCT CAGCTGGTGGTGGCCATCGCCGCCCTGCGGGCGGCCGGCACCCACCCGCGGGACCGCATCGAACATGCCGCCGTGGTGCC CGACGACAACCTGGCCGATCTGGCCGAACTCGGGGTGACCGTGGTGACCCAGCCCAATTTCGTCGCCGAGCGCGGTGATC AGTACCTGGCCGAGGTGCCCGCCGACGAGCACGACCAGTTGTGGCGCCTCGCTTCGCTGCGCGACGCGCGGGTGCCCGTC GCGCTGTCCACCGACATGCCGTTCGGCCACGGCGACCCGTGGACGGCGATGCGCGCCGCGGTGCACCGCACCACGCCCAG CGGCGTCGTGCTGGGCACACGCGAATGTGTCTCGGCGCGAACGGCTTTGACGATGTTTTTGGGCCAGGCCGACCAGCCGG ACCGGGTGCGCAGCGTGCAGCCCGGCGAGCCGGGCGACCTGTGTGTGCTCAACGAGCCGCCGCACACCGCGCTGGCCGAA CTGGACGCCGGCATGGTGGCCGCCACCATCATCGGCGGTGAGCTCGTCTACTTCGCGATGTGA
Upstream 100 bases:
>100_bases CCGACAACGCCGCCGTGCGTCACCTGGTCAGCCAAAGGCGTTGCCTGTCATGCTGATTCAGCGGGCCACCCTGCTGGACG GGACGGCGGCCGACATCCGG
Downstream 100 bases:
>100_bases CCTCAGCCGGCCGGCGTCAGCGCGGCCCGCAGGCTGTTGCACTGGCTGTCGAAAAACCGCTGCGACACTTGAACTTTCGG CAAAATCAGGTCGAAGCCGT
Product: hypothetical protein
Products: NA
Alternate protein names: Exos Regulatory Protein AepA; Amidohydrolase Family Protein; Amidase; Hydrolase; Amidohydrolase Domain-Containing Protein; Amidohydrolase Family; TIM-Barrel Fold Metal-Dependent Hydrolase
Number of amino acids: Translated: 420; Mature: 419
Protein sequence:
>420_residues MGARIEEVAPADDGLAARAGEGVLYAGGGTVLPGLHDHHVHLRSAASALDSFFVGPPGVSTRAELTRLLANATPGPDGWI RAVGYHDSVAGALDRTALDAIVRDVPVRIQHRSGALWILNSEALGRIGLAEHPDGRLRSADRGWSQALAHRETDLAELSR RITATGVTGVTDATPDLDDDDRAALAAAHARGEFRPRPSFLSPGKKILHDDRLDLDALTEWVAGQHDTGQPVAVHCVTAA QLVVAIAALRAAGTHPRDRIEHAAVVPDDNLADLAELGVTVVTQPNFVAERGDQYLAEVPADEHDQLWRLASLRDARVPV ALSTDMPFGHGDPWTAMRAAVHRTTPSGVVLGTRECVSARTALTMFLGQADQPDRVRSVQPGEPGDLCVLNEPPHTALAE LDAGMVAATIIGGELVYFAM
Sequences:
>Translated_420_residues MGARIEEVAPADDGLAARAGEGVLYAGGGTVLPGLHDHHVHLRSAASALDSFFVGPPGVSTRAELTRLLANATPGPDGWI RAVGYHDSVAGALDRTALDAIVRDVPVRIQHRSGALWILNSEALGRIGLAEHPDGRLRSADRGWSQALAHRETDLAELSR RITATGVTGVTDATPDLDDDDRAALAAAHARGEFRPRPSFLSPGKKILHDDRLDLDALTEWVAGQHDTGQPVAVHCVTAA QLVVAIAALRAAGTHPRDRIEHAAVVPDDNLADLAELGVTVVTQPNFVAERGDQYLAEVPADEHDQLWRLASLRDARVPV ALSTDMPFGHGDPWTAMRAAVHRTTPSGVVLGTRECVSARTALTMFLGQADQPDRVRSVQPGEPGDLCVLNEPPHTALAE LDAGMVAATIIGGELVYFAM >Mature_419_residues GARIEEVAPADDGLAARAGEGVLYAGGGTVLPGLHDHHVHLRSAASALDSFFVGPPGVSTRAELTRLLANATPGPDGWIR AVGYHDSVAGALDRTALDAIVRDVPVRIQHRSGALWILNSEALGRIGLAEHPDGRLRSADRGWSQALAHRETDLAELSRR ITATGVTGVTDATPDLDDDDRAALAAAHARGEFRPRPSFLSPGKKILHDDRLDLDALTEWVAGQHDTGQPVAVHCVTAAQ LVVAIAALRAAGTHPRDRIEHAAVVPDDNLADLAELGVTVVTQPNFVAERGDQYLAEVPADEHDQLWRLASLRDARVPVA LSTDMPFGHGDPWTAMRAAVHRTTPSGVVLGTRECVSARTALTMFLGQADQPDRVRSVQPGEPGDLCVLNEPPHTALAEL DAGMVAATIIGGELVYFAM
Specific function: Unknown
COG id: COG1574
COG function: function code R; Predicted metal-dependent hydrolase with the TIM-barrel fold
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44501; Mature: 44370
Theoretical pI: Translated: 5.25; Mature: 5.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGARIEEVAPADDGLAARAGEGVLYAGGGTVLPGLHDHHVHLRSAASALDSFFVGPPGVS CCCCCCCCCCCCCCCHHCCCCCEEEECCCEECCCCCCCHHHHHHHHHHHHHHCCCCCCCC TRAELTRLLANATPGPDGWIRAVGYHDSVAGALDRTALDAIVRDVPVRIQHRSGALWILN HHHHHHHHHHCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHCCCEEEEECCCEEEEEC SEALGRIGLAEHPDGRLRSADRGWSQALAHRETDLAELSRRITATGVTGVTDATPDLDDD CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCCCC DRAALAAAHARGEFRPRPSFLSPGKKILHDDRLDLDALTEWVAGQHDTGQPVAVHCVTAA CHHHHHHHHHCCCCCCCCCCCCCCHHHHCCCCCCHHHHHHHHCCCCCCCCCEEEEHHHHH QLVVAIAALRAAGTHPRDRIEHAAVVPDDNLADLAELGVTVVTQPNFVAERGDQYLAEVP HHHHHHHHHHHCCCCCHHHHCCEEECCCCCHHHHHHCCEEEEECCCHHHHCCCHHHHHCC ADEHDQLWRLASLRDARVPVALSTDMPFGHGDPWTAMRAAVHRTTPSGVVLGTRECVSAR CCCHHHHHHHHHHCCCCCCEEEECCCCCCCCCCHHHHHHHHHCCCCCCEEEECHHHHHHH TALTMFLGQADQPDRVRSVQPGEPGDLCVLNEPPHTALAELDAGMVAATIIGGELVYFAM HHHHHHHCCCCCCHHHCCCCCCCCCCEEEECCCCCHHHHHHCCCCEEEEEECCEEEEEEC >Mature Secondary Structure GARIEEVAPADDGLAARAGEGVLYAGGGTVLPGLHDHHVHLRSAASALDSFFVGPPGVS CCCCCCCCCCCCCCHHCCCCCEEEECCCEECCCCCCCHHHHHHHHHHHHHHCCCCCCCC TRAELTRLLANATPGPDGWIRAVGYHDSVAGALDRTALDAIVRDVPVRIQHRSGALWILN HHHHHHHHHHCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHCCCEEEEECCCEEEEEC SEALGRIGLAEHPDGRLRSADRGWSQALAHRETDLAELSRRITATGVTGVTDATPDLDDD CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCCCC DRAALAAAHARGEFRPRPSFLSPGKKILHDDRLDLDALTEWVAGQHDTGQPVAVHCVTAA CHHHHHHHHHCCCCCCCCCCCCCCHHHHCCCCCCHHHHHHHHCCCCCCCCCEEEEHHHHH QLVVAIAALRAAGTHPRDRIEHAAVVPDDNLADLAELGVTVVTQPNFVAERGDQYLAEVP HHHHHHHHHHHCCCCCHHHHCCEEECCCCCHHHHHHCCEEEEECCCHHHHCCCHHHHHCC ADEHDQLWRLASLRDARVPVALSTDMPFGHGDPWTAMRAAVHRTTPSGVVLGTRECVSAR CCCHHHHHHHHHHCCCCCCEEEECCCCCCCCCCHHHHHHHHHCCCCCCEEEECHHHHHHH TALTMFLGQADQPDRVRSVQPGEPGDLCVLNEPPHTALAELDAGMVAATIIGGELVYFAM HHHHHHHCCCCCCHHHCCCCCCCCCCEEEECCCCCHHHHHHCCCCEEEEEECCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA