| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41408875
Identifier: 41408875
GI number: 41408875
Start: 3109318
End: 3110055
Strand: Reverse
Name: 41408875
Synonym: MAP2777c
Alternate gene names: NA
Gene position: 3110055-3109318 (Counterclockwise)
Preceding gene: 41408876
Following gene: 41408874
Centisome position: 64.39
GC content: 71.54
Gene sequence:
>738_bases TTGCTTCGGCGTCAACGGGGTTTGCTTGGTCAGCCGCAGCGCCAGCATCGACACGTTGGGGTTGGCGTCGATGCTCGAGC ACACGCTGTGGCCCATGGCGATCGCGTCGTCGTCGTCGAACATGGTGATCCCGCCCTTGGCCAGGCCGGCGAGGAACGCG TCATCGGCTTCGTCCGCGGCGGCCGCTGCCGCGCACAACAGCGCGGCGGCGGACAGGACGACCGCGCAGGCGGCCGGCCA CGCGGCACGACCGGCCTTGGTGTGAGTCATGGCCTCCCCTGGGTGCGGTGGGCCGAATCAAGACGACTTATTGAAACGAT AGACGAATTCTGGGTGACGTCGCCGCGGCGCACGCCGGCTCGCGGTCACGACGAGCAATGCGTGGCTTTGATCCGCCCGT TCGGCGCTCCCAGCTTGGCCAGGGCGTCGGAGTCGGCGCTGGCCGCATCGGGGCCCGAGCCGCCCCGGAACCGCCCGGAG CCGCGGTCGAAGGCCACCGACGCAGCCGTTGCGGGTGCCCGCGACCACTTCGCAGGCGTCGCCGGCTTCGGCGGTGCAGT GCGCAAGGGCGAGTTGGTTCGCCTGGTCCTGACTGTTCGCGGTCGCCCAGCCGGCGGCGCGTCCGCTGCCCACCGACACC GCCAGGGCGACGAAGTCGTCGTCGGCCCAGGCGGTTTGGGGCGCCCACAGCGCCGCGGCCGGGCATCCGACCGCGACGAC GACGACGGCGATGAGTGA
Upstream 100 bases:
>100_bases ACATCAGCGGCGGCGGGATCAGCCAGCCCAGCGAGGGGTCGACGTCGTCCTTGTACTGCGGGCAGTAGCTGGCGACCGAA AGACCGATGAAGTAGCCGGA
Downstream 100 bases:
>100_bases CCGCACGCTGGGCTCCTTTGTGTCCAGGACAGCAATCTAGCGCCGACGCCGGGGCGCGCGCGGCGGAATCGGCCGGCGGC TACGCGCTGCGGTCGGGGTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 245; Mature: 245
Protein sequence:
>245_residues MLRRQRGLLGQPQRQHRHVGVGVDARAHAVAHGDRVVVVEHGDPALGQAGEERVIGFVRGGRCRAQQRGGGQDDRAGGRP RGTTGLGVSHGLPWVRWAESRRLIETIDEFWVTSPRRTPARGHDEQCVALIRPFGAPSLARASESALAASGPEPPRNRPE PRSKATDAAVAGARDHFAGVAGFGGAVRKGELVRLVLTVRGRPAGGASAAHRHRQGDEVVVGPGGLGRPQRRGRASDRDD DDGDE
Sequences:
>Translated_245_residues MLRRQRGLLGQPQRQHRHVGVGVDARAHAVAHGDRVVVVEHGDPALGQAGEERVIGFVRGGRCRAQQRGGGQDDRAGGRP RGTTGLGVSHGLPWVRWAESRRLIETIDEFWVTSPRRTPARGHDEQCVALIRPFGAPSLARASESALAASGPEPPRNRPE PRSKATDAAVAGARDHFAGVAGFGGAVRKGELVRLVLTVRGRPAGGASAAHRHRQGDEVVVGPGGLGRPQRRGRASDRDD DDGDE >Mature_245_residues MLRRQRGLLGQPQRQHRHVGVGVDARAHAVAHGDRVVVVEHGDPALGQAGEERVIGFVRGGRCRAQQRGGGQDDRAGGRP RGTTGLGVSHGLPWVRWAESRRLIETIDEFWVTSPRRTPARGHDEQCVALIRPFGAPSLARASESALAASGPEPPRNRPE PRSKATDAAVAGARDHFAGVAGFGGAVRKGELVRLVLTVRGRPAGGASAAHRHRQGDEVVVGPGGLGRPQRRGRASDRDD DDGDE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26063; Mature: 26063
Theoretical pI: Translated: 11.79; Mature: 11.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 0.4 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLRRQRGLLGQPQRQHRHVGVGVDARAHAVAHGDRVVVVEHGDPALGQAGEERVIGFVRG CCCCCCCCCCCCHHHHCEECCCCCCHHHEEECCCEEEEEECCCCCCCCCCCCCEEEEECC GRCRAQQRGGGQDDRAGGRPRGTTGLGVSHGLPWVRWAESRRLIETIDEFWVTSPRRTPA CEEEHHHCCCCCCCCCCCCCCCCCCCCHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCC RGHDEQCVALIRPFGAPSLARASESALAASGPEPPRNRPEPRSKATDAAVAGARDHFAGV CCCCHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHH AGFGGAVRKGELVRLVLTVRGRPAGGASAAHRHRQGDEVVVGPGGLGRPQRRGRASDRDD HCCCCCCCCCCEEEEEEEECCCCCCCCHHHHHHCCCCEEEECCCCCCCCHHCCCCCCCCC DDGDE CCCCC >Mature Secondary Structure MLRRQRGLLGQPQRQHRHVGVGVDARAHAVAHGDRVVVVEHGDPALGQAGEERVIGFVRG CCCCCCCCCCCCHHHHCEECCCCCCHHHEEECCCEEEEEECCCCCCCCCCCCCEEEEECC GRCRAQQRGGGQDDRAGGRPRGTTGLGVSHGLPWVRWAESRRLIETIDEFWVTSPRRTPA CEEEHHHCCCCCCCCCCCCCCCCCCCCHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCC RGHDEQCVALIRPFGAPSLARASESALAASGPEPPRNRPEPRSKATDAAVAGARDHFAGV CCCCHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHH AGFGGAVRKGELVRLVLTVRGRPAGGASAAHRHRQGDEVVVGPGGLGRPQRRGRASDRDD HCCCCCCCCCCEEEEEEEECCCCCCCCHHHHHHCCCCEEEECCCCCCCCHHCCCCCCCCC DDGDE CCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA