Definition Mycobacterium avium subsp. paratuberculosis K-10, complete genome.
Accession NC_002944
Length 4,829,781

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The map label for this gene is 41408433

Identifier: 41408433

GI number: 41408433

Start: 2625313

End: 2626221

Strand: Reverse

Name: 41408433

Synonym: MAP2335c

Alternate gene names: NA

Gene position: 2626221-2625313 (Counterclockwise)

Preceding gene: 41408435

Following gene: 41408432

Centisome position: 54.38

GC content: 70.08

Gene sequence:

>909_bases
GTGGCTGAGCAGTTGCTGATCGGCGACGTCACGGCCCTGACCGGAATCGCCTCGGGCCGTATTCGCCACTACGAGAAGAT
CGGGCTGCTGCACGCCGACCACCTGTCCAACGGCTACCGCGTCTTCGACGTGGAACAGGTGCTGGACCTGTTGCGCATCG
ACCTGATGCGCAGTCTCGGCGTCGGCATCAACGACATTCAGCGATTGCTGCACGGCGGGCACAGCACGCTGGCGGATCTG
CTCGACGAGCACCGCGCACTGCTGATCCAGCAGCGCGACCGGTTGGACCAACTGATCCGCGCCCTGGACGAATCCTGCGC
CCAGTCAAGAGCGGCCGCCGACGGCACCGACGTCAGCGAGCACCTGCTGCGCCAGCTGGCGACCACGCATCGCGACAGCA
TCGGGGTGATCGGGCGGCTCAGCGCCCCACTGCCGGCGCCGGTCGCCGCGATGTATGCCGACCTGTTCGACGAGTGGGAC
CTGCCGGTCCCCGCCCTGTTCGGGCAGATGAGGCTTCCGAGCGCGGCCAGCACCCTGCTGGCCCGACTGGCCGAGACCCC
GGGGCGCCAGGTGCTGTTCGACCGGCTGCGCCGGCTGGCCGCCGACGTCATCGCGCTCGGCGAAAGCGTATCGGCGGCAA
CCGAACTCGCGCACAATTGGATCGAGCAGCAGCTGGCCGACCCGCTGCCCGACGACGTGGTCACGGTGCTGCGGGGCGTG
CAACCGCTGTTGGGGCAGGACCCGGTGATCGTACAGGGGTTTCGGGCCTGGGCGGGCTCGATCAGCCCGGCAGCCGCCCG
GTTCATCGAGGAGATCGCGCGGCAGACCGCGCGCCGGGGCCTGGCGGCGGTGAGCGTCATCGTGCTGCCCGCGGCGGACC
GGGCCCAAACCGTCGATGCGACGCCGTGA

Upstream 100 bases:

>100_bases
CCTGTCCCGCGCCAGCTTCAAGGCACGCCGGGTCAGGTCGATGAGCTGATCGTGTTGCATCCGCTCAGTACAGACCTTGC
GACAGTTGTAAGGTCAAGGA

Downstream 100 bases:

>100_bases
TACAAATGTGACTCGTGTGATCAGCGGGGCGCATGGGGTTTATGTCGTACCCTGTGGCCTGTGTCCTCCGTTTCGCGGCG
CGATCTGCTGAAATTCGCGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 302; Mature: 301

Protein sequence:

>302_residues
MAEQLLIGDVTALTGIASGRIRHYEKIGLLHADHLSNGYRVFDVEQVLDLLRIDLMRSLGVGINDIQRLLHGGHSTLADL
LDEHRALLIQQRDRLDQLIRALDESCAQSRAAADGTDVSEHLLRQLATTHRDSIGVIGRLSAPLPAPVAAMYADLFDEWD
LPVPALFGQMRLPSAASTLLARLAETPGRQVLFDRLRRLAADVIALGESVSAATELAHNWIEQQLADPLPDDVVTVLRGV
QPLLGQDPVIVQGFRAWAGSISPAAARFIEEIARQTARRGLAAVSVIVLPAADRAQTVDATP

Sequences:

>Translated_302_residues
MAEQLLIGDVTALTGIASGRIRHYEKIGLLHADHLSNGYRVFDVEQVLDLLRIDLMRSLGVGINDIQRLLHGGHSTLADL
LDEHRALLIQQRDRLDQLIRALDESCAQSRAAADGTDVSEHLLRQLATTHRDSIGVIGRLSAPLPAPVAAMYADLFDEWD
LPVPALFGQMRLPSAASTLLARLAETPGRQVLFDRLRRLAADVIALGESVSAATELAHNWIEQQLADPLPDDVVTVLRGV
QPLLGQDPVIVQGFRAWAGSISPAAARFIEEIARQTARRGLAAVSVIVLPAADRAQTVDATP
>Mature_301_residues
AEQLLIGDVTALTGIASGRIRHYEKIGLLHADHLSNGYRVFDVEQVLDLLRIDLMRSLGVGINDIQRLLHGGHSTLADLL
DEHRALLIQQRDRLDQLIRALDESCAQSRAAADGTDVSEHLLRQLATTHRDSIGVIGRLSAPLPAPVAAMYADLFDEWDL
PVPALFGQMRLPSAASTLLARLAETPGRQVLFDRLRRLAADVIALGESVSAATELAHNWIEQQLADPLPDDVVTVLRGVQ
PLLGQDPVIVQGFRAWAGSISPAAARFIEEIARQTARRGLAAVSVIVLPAADRAQTVDATP

Specific function: Unknown

COG id: COG0789

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32737; Mature: 32606

Theoretical pI: Translated: 5.34; Mature: 5.34

Prosite motif: PS50937 HTH_MERR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAEQLLIGDVTALTGIASGRIRHYEKIGLLHADHLSNGYRVFDVEQVLDLLRIDLMRSLG
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHC
VGINDIQRLLHGGHSTLADLLDEHRALLIQQRDRLDQLIRALDESCAQSRAAADGTDVSE
CCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH
HLLRQLATTHRDSIGVIGRLSAPLPAPVAAMYADLFDEWDLPVPALFGQMRLPSAASTLL
HHHHHHHHHCCCCCCHHHCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHH
ARLAETPGRQVLFDRLRRLAADVIALGESVSAATELAHNWIEQQLADPLPDDVVTVLRGV
HHHHHCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
QPLLGQDPVIVQGFRAWAGSISPAAARFIEEIARQTARRGLAAVSVIVLPAADRAQTVDA
HHHHCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCC
TP
CC
>Mature Secondary Structure 
AEQLLIGDVTALTGIASGRIRHYEKIGLLHADHLSNGYRVFDVEQVLDLLRIDLMRSLG
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHC
VGINDIQRLLHGGHSTLADLLDEHRALLIQQRDRLDQLIRALDESCAQSRAAADGTDVSE
CCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH
HLLRQLATTHRDSIGVIGRLSAPLPAPVAAMYADLFDEWDLPVPALFGQMRLPSAASTLL
HHHHHHHHHCCCCCCHHHCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHH
ARLAETPGRQVLFDRLRRLAADVIALGESVSAATELAHNWIEQQLADPLPDDVVTVLRGV
HHHHHCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
QPLLGQDPVIVQGFRAWAGSISPAAARFIEEIARQTARRGLAAVSVIVLPAADRAQTVDA
HHHHCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCC
TP
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA