Definition Mycobacterium avium subsp. paratuberculosis K-10, complete genome.
Accession NC_002944
Length 4,829,781

Click here to switch to the map view.

The map label for this gene is 41407950

Identifier: 41407950

GI number: 41407950

Start: 2030512

End: 2031567

Strand: Direct

Name: 41407950

Synonym: MAP1852

Alternate gene names: NA

Gene position: 2030512-2031567 (Clockwise)

Preceding gene: 41407949

Following gene: 41407951

Centisome position: 42.04

GC content: 65.06

Gene sequence:

>1056_bases
ATGAGGTTTCGCGGCCCGCTCATCGCGCTGACGCTGTTCATGATCGTCTCGCTGACGCTGACCTGGCTGGTGTATGTGAG
CCTGCGCCGCGACGTGGCCGGCGATACGGCCCGGTATTCGGCGGTGTTCAGCGATGTGTACGGGCTGCGCGAAGGTGACG
ACGTCCGGATGGCCGGGGTGCGGGTGGGCCGGGTCGAAAAGATCGAACTGGACGGAAAATTGGCGAAGGTCTCCTTCGTG
GTGCAGTCCGAACAGCGGCTGTATGGAAACACCCTGGCGTCGGTCACCTACCAGAACATCGTCGGCCAGCGCTATCTCGG
CCTGTCGTTGGGCAAGGAGGGCAATCCAGCGCAGCTTCCGCCGGGCAGCACCATTCCGCTGGAACGCACCGAACCCTCCT
TCGACGTCACCACGCTGCTCAACGGCTACGAACCGTTGTTCAGCTTGCTCAACCCGCACGACGCCGACAACCTGACCAAG
GGCATCATCGCCTCGCTGCAGGGCGACACGTCGTCGCTGACCACCCTGGTCGGCCAGACTTCCACGCTCACACAGACTTT
CGCGGGCCGCGACCAGGCGCTCGGCAACGTGATCACCAACCTGAACAAGGTGGTGGGCAACCTGGCGGCGCAGAACGACA
ACCTCGACGGGGTCATCACCCAGACCCGCAGCGTGGTCGGGGAACTCGACCGGCGACGCCCGGACCTGGTGGCCTCGGTG
GGGTCGCTGGCCCGGCTGAGCGATCGGCTGTCGGCCTCGGCCGCCGACGTGTACCCGGCGCTGCGTGAGTTCATCGACCG
CCAACCGGGCGTCACCAAACACATCATGGACGTCGAACCGCAGGTGGCCTTCTTCGGCGACAACATCCCGCTGCTGTTGA
AGGGGCTCACCCGGGTGGGCAACCAGGGCGCCTACGGCAACGCCTACGTGTGCGACGTGAACTTCATGGGATTTTTTCCG
GGGCTCAACGACGTCGTGCCGATCATCATCAACGCCGCCACACCCGGCAACCGGGCCTGGCACACCCCGAGATGCAGGAG
CACCGTCGATGGTTGA

Upstream 100 bases:

>100_bases
AGGCCACCGAGTTGCTGCTGGGCCCGGTCGCCCGCGGAACGACGGTGTCGCTGGCGCATCCGCCCGGGCCGTCGCCCGCG
CCTCGACCCGGGGAGGGCAA

Downstream 100 bases:

>100_bases
GTTGATGGCCGGGACCACGGCAGGATCGATGCTCGACAGGTCTGTGCGGCAACGGCTTTCGGCACTGACGAAGCGCCCGC
TGGAGAGCTACAACAAGACC

Product: hypothetical protein

Products: NA

Alternate protein names: Mce Family Protein; Secreted Protein; MCE-Family B; MCE Family Protein; Mammalian Cell Entry Related Domain Protein; MCE-Family Protein; Mce-Related Protein; Mce Family B; Mce Family C; Mce Family Lipoe; Mce Family Protein Mce5B; MCE-Family; MCE-Family C; Mammalian Cell Entry-Like Domain-Containing Protein; Mce Family Lipob; Virulence Factor MCE-Like Protein; Mce-Family C

Number of amino acids: Translated: 351; Mature: 351

Protein sequence:

>351_residues
MRFRGPLIALTLFMIVSLTLTWLVYVSLRRDVAGDTARYSAVFSDVYGLREGDDVRMAGVRVGRVEKIELDGKLAKVSFV
VQSEQRLYGNTLASVTYQNIVGQRYLGLSLGKEGNPAQLPPGSTIPLERTEPSFDVTTLLNGYEPLFSLLNPHDADNLTK
GIIASLQGDTSSLTTLVGQTSTLTQTFAGRDQALGNVITNLNKVVGNLAAQNDNLDGVITQTRSVVGELDRRRPDLVASV
GSLARLSDRLSASAADVYPALREFIDRQPGVTKHIMDVEPQVAFFGDNIPLLLKGLTRVGNQGAYGNAYVCDVNFMGFFP
GLNDVVPIIINAATPGNRAWHTPRCRSTVDG

Sequences:

>Translated_351_residues
MRFRGPLIALTLFMIVSLTLTWLVYVSLRRDVAGDTARYSAVFSDVYGLREGDDVRMAGVRVGRVEKIELDGKLAKVSFV
VQSEQRLYGNTLASVTYQNIVGQRYLGLSLGKEGNPAQLPPGSTIPLERTEPSFDVTTLLNGYEPLFSLLNPHDADNLTK
GIIASLQGDTSSLTTLVGQTSTLTQTFAGRDQALGNVITNLNKVVGNLAAQNDNLDGVITQTRSVVGELDRRRPDLVASV
GSLARLSDRLSASAADVYPALREFIDRQPGVTKHIMDVEPQVAFFGDNIPLLLKGLTRVGNQGAYGNAYVCDVNFMGFFP
GLNDVVPIIINAATPGNRAWHTPRCRSTVDG
>Mature_351_residues
MRFRGPLIALTLFMIVSLTLTWLVYVSLRRDVAGDTARYSAVFSDVYGLREGDDVRMAGVRVGRVEKIELDGKLAKVSFV
VQSEQRLYGNTLASVTYQNIVGQRYLGLSLGKEGNPAQLPPGSTIPLERTEPSFDVTTLLNGYEPLFSLLNPHDADNLTK
GIIASLQGDTSSLTTLVGQTSTLTQTFAGRDQALGNVITNLNKVVGNLAAQNDNLDGVITQTRSVVGELDRRRPDLVASV
GSLARLSDRLSASAADVYPALREFIDRQPGVTKHIMDVEPQVAFFGDNIPLLLKGLTRVGNQGAYGNAYVCDVNFMGFFP
GLNDVVPIIINAATPGNRAWHTPRCRSTVDG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 38015; Mature: 38015

Theoretical pI: Translated: 6.80; Mature: 6.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRFRGPLIALTLFMIVSLTLTWLVYVSLRRDVAGDTARYSAVFSDVYGLREGDDVRMAGV
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCEEEECE
RVGRVEKIELDGKLAKVSFVVQSEQRLYGNTLASVTYQNIVGQRYLGLSLGKEGNPAQLP
EECCEEEEEECCCEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
PGSTIPLERTEPSFDVTTLLNGYEPLFSLLNPHDADNLTKGIIASLQGDTSSLTTLVGQT
CCCCCCCCCCCCCCHHHHHHCCHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHCCC
STLTQTFAGRDQALGNVITNLNKVVGNLAAQNDNLDGVITQTRSVVGELDRRRPDLVASV
HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCHHHHHHH
GSLARLSDRLSASAADVYPALREFIDRQPGVTKHIMDVEPQVAFFGDNIPLLLKGLTRVG
HHHHHHHHHHHCHHHHHHHHHHHHHHCCCCCHHHHHCCCCCEEEECCCHHHHHHHHHHHC
NQGAYGNAYVCDVNFMGFFPGLNDVVPIIINAATPGNRAWHTPRCRSTVDG
CCCCCCCEEEEEEEHHCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MRFRGPLIALTLFMIVSLTLTWLVYVSLRRDVAGDTARYSAVFSDVYGLREGDDVRMAGV
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCEEEECE
RVGRVEKIELDGKLAKVSFVVQSEQRLYGNTLASVTYQNIVGQRYLGLSLGKEGNPAQLP
EECCEEEEEECCCEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
PGSTIPLERTEPSFDVTTLLNGYEPLFSLLNPHDADNLTKGIIASLQGDTSSLTTLVGQT
CCCCCCCCCCCCCCHHHHHHCCHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHCCC
STLTQTFAGRDQALGNVITNLNKVVGNLAAQNDNLDGVITQTRSVVGELDRRRPDLVASV
HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCHHHHHHH
GSLARLSDRLSASAADVYPALREFIDRQPGVTKHIMDVEPQVAFFGDNIPLLLKGLTRVG
HHHHHHHHHHHCHHHHHHHHHHHHHHCCCCCHHHHHCCCCCEEEECCCHHHHHHHHHHHC
NQGAYGNAYVCDVNFMGFFPGLNDVVPIIINAATPGNRAWHTPRCRSTVDG
CCCCCCCEEEEEEEHHCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA