Definition Mycobacterium avium subsp. paratuberculosis K-10, complete genome.
Accession NC_002944
Length 4,829,781

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The map label for this gene is 41407806

Identifier: 41407806

GI number: 41407806

Start: 1866017

End: 1866670

Strand: Direct

Name: 41407806

Synonym: MAP1708

Alternate gene names: NA

Gene position: 1866017-1866670 (Clockwise)

Preceding gene: 41407805

Following gene: 41407808

Centisome position: 38.64

GC content: 64.98

Gene sequence:

>654_bases
ATGACCACCACGTCGTCCATCGAAACCATCGCCGACATCGCCATACCCGACACCGCATTGGTTCGCGAGATCACCGAGTT
CATCCGGGATGCCGAGGACGACCTGCTTTTCCACCATTCCCGACGGGTATTCCTCTTCGGCGCGCTGCAGGGCCGGCGCC
GGGGACTGCAACCGGACCTGGAACTGCTGTACGCGGGCGCCATGTTTCACGACCTGGGCCTGACCGAGCGCTACCGCGAT
TCCGCCCTGCGCATCGAGGTCGACGGTGCCAATGCGGCGCGGGAGTTCCTGCTGCACCGCGGCGTCAGCAAGGCAGACGC
CGACAAGGTATGGCTGGGCATCGCCTTGCACACCACCCCGGGGGTGCCCGAATTCCTGGATCCCGAAATCGCCTTGGTGA
CCGCCGGTGTCGAGACCGATGTGGTGGGCGTTGGCCGCGACGACCTTGCTCCCGAAGCGCTCGCCGCGGTGATCGCCACC
CATCCGCGCCCGGATTTCAAAACGCGCATTCTGCAGGCCTTCAACGACGGGATGAAGCACCGCCCGCACAGCACGTTCGG
CACGATGAACGCCGATGTGCTCGAGCACTTCGACCCGACGTTCGCCCGGGACAACCTCGTCGATCTGATCCTCAACAACG
GCTGGCCCGAATAG

Upstream 100 bases:

>100_bases
CTACATCACCGGTCAAATCCTGCGCGTCGACGGGGGCGGAAGTATCGCCGCGTAATGCCAAGGCGGCCAACACAGTACAG
CTCAACCGAGGAGACATATC

Downstream 100 bases:

>100_bases
CATCGCGCCGCAAGGTCGCCGCTTCAGTCCGATGCGGCTGAATGTCCTGCGGATCGCTTGCCTTGCTCGGTGTACATCGC
GTCGATCTGGGCGGCGTATC

Product: hypothetical protein

Products: NA

Alternate protein names: Metal-Dependent Phosphohydrolase; Cyanamide Hydratase; HD Domain-Containing Protein; HD Domain-Containing; Sensory Box HD Domain-Containing Protein

Number of amino acids: Translated: 217; Mature: 216

Protein sequence:

>217_residues
MTTTSSIETIADIAIPDTALVREITEFIRDAEDDLLFHHSRRVFLFGALQGRRRGLQPDLELLYAGAMFHDLGLTERYRD
SALRIEVDGANAAREFLLHRGVSKADADKVWLGIALHTTPGVPEFLDPEIALVTAGVETDVVGVGRDDLAPEALAAVIAT
HPRPDFKTRILQAFNDGMKHRPHSTFGTMNADVLEHFDPTFARDNLVDLILNNGWPE

Sequences:

>Translated_217_residues
MTTTSSIETIADIAIPDTALVREITEFIRDAEDDLLFHHSRRVFLFGALQGRRRGLQPDLELLYAGAMFHDLGLTERYRD
SALRIEVDGANAAREFLLHRGVSKADADKVWLGIALHTTPGVPEFLDPEIALVTAGVETDVVGVGRDDLAPEALAAVIAT
HPRPDFKTRILQAFNDGMKHRPHSTFGTMNADVLEHFDPTFARDNLVDLILNNGWPE
>Mature_216_residues
TTTSSIETIADIAIPDTALVREITEFIRDAEDDLLFHHSRRVFLFGALQGRRRGLQPDLELLYAGAMFHDLGLTERYRDS
ALRIEVDGANAAREFLLHRGVSKADADKVWLGIALHTTPGVPEFLDPEIALVTAGVETDVVGVGRDDLAPEALAAVIATH
PRPDFKTRILQAFNDGMKHRPHSTFGTMNADVLEHFDPTFARDNLVDLILNNGWPE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24048; Mature: 23917

Theoretical pI: Translated: 4.76; Mature: 4.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTTSSIETIADIAIPDTALVREITEFIRDAEDDLLFHHSRRVFLFGALQGRRRGLQPDL
CCCCHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHCCCEEEEEEECHHHCCCCCCCH
ELLYAGAMFHDLGLTERYRDSALRIEVDGANAAREFLLHRGVSKADADKVWLGIALHTTP
HHHHHHHHHHHCCCCHHHCCCEEEEEECCCHHHHHHHHHCCCCCCCCCEEEEEEEEECCC
GVPEFLDPEIALVTAGVETDVVGVGRDDLAPEALAAVIATHPRPDFKTRILQAFNDGMKH
CCCCCCCCCEEEEECCCCCCEEECCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHCC
RPHSTFGTMNADVLEHFDPTFARDNLVDLILNNGWPE
CCCCCCCCCCHHHHHHCCCCHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
TTTSSIETIADIAIPDTALVREITEFIRDAEDDLLFHHSRRVFLFGALQGRRRGLQPDL
CCCHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHCCCEEEEEEECHHHCCCCCCCH
ELLYAGAMFHDLGLTERYRDSALRIEVDGANAAREFLLHRGVSKADADKVWLGIALHTTP
HHHHHHHHHHHCCCCHHHCCCEEEEEECCCHHHHHHHHHCCCCCCCCCEEEEEEEEECCC
GVPEFLDPEIALVTAGVETDVVGVGRDDLAPEALAAVIATHPRPDFKTRILQAFNDGMKH
CCCCCCCCCEEEEECCCCCCEEECCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHCC
RPHSTFGTMNADVLEHFDPTFARDNLVDLILNNGWPE
CCCCCCCCCCHHHHHHCCCCHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA